Basic Information

Gene Symbol
-
Assembly
GCA_948252205.1
Location
OX411741.1:49871841-49874264[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2e-07 0.00042 21.7 0.1 1 38 263 302 263 308 0.94
2 4 5.4e-08 0.00011 23.5 0.2 2 44 317 363 316 365 0.92
3 4 2e-07 0.00041 21.7 0.0 1 41 369 409 369 411 0.96
4 4 1.9e-06 0.0039 18.6 0.0 3 46 421 466 419 466 0.93

Sequence Information

Coding Sequence
ATGGACGACCATATATTTTCTGAGACTGATACCAACTCAGAAGTCGACAGTGATGTGGAACCTGAAAACTGGAAGCGGCTAAAACAACTGATAAACGAGAACGACGACCTACACAGTGACCACAGTGACCAACCAACGACAACGACACACACCCTCCAAAACACTACAATAAACAGTGAATCAATAACAGAACAAGATCGTTTAAAACTAGCCTTGTCTATAAACAAAACATTAGATGAAAAGATGATTGAAATGGAAAGGCTATTTACTTACCGTCTTCGTGAGTGCAAGGAGAAGCTAAATGAGGTTCATAGGAGCGCTAGTCTATTAAATGAAAAAAATAAAACTTTCCGCTATATCAGTTGTGGTAGGCCCTACTTTAGAGACAGACAGAACTTCCCTGCTCCTGATAATGATGATGCCAAAATGGCAAAGTCTCAAATGTATGACTTCTCCTTACTTACTCCAGCACCGGGCTGGACAGTAAAGGACAAGTCTCAAATGATTAGTGTGATCCATGAAATGTCAATAGATCTTAAGAAAAATGAGCTTTATGCTAAAATTGAGACCTTAAAGGGCAATAATAAATTATCAAAAATACAGAAAAGACAAATAATGGCCATTAGAAAGGAAATTGATAGTGTAAGTAAATTACCTATAAGTAAAGTGGCTCTCCCAATAGAACAAGATTATGATTGGGACATATTGACAAAAATGTTAAGCAGGAGGCACACTGCCCAAGAATATCAAGCCCTCTGGAAGTTATTCTTGCACCCTACAATTAACAAAAATACTTGGACTAATACTGAACATGCCAAATTACAACAAATTGCTTGTGTGTACCGTAAACAAGATTGGGAATCTATTGCTCGCACACTCAATTCTGGCCGAACTGGGTATCAGTGCTTTGTGTACCACCAGACAAGTATAGACCGATCTTCTACTCAAAATAAATGGACTAATGAGGAGATAATATACCTTAAAAGATTGGTAGAGCATTTCAAAGAAGGCCTTTACATTCCATGGGGGAAGGTAGCTGCAGCAATGGAAAACCGCACTAAAATCCAAATCTATAATAAGTACATGAGACTCATTGAACAAAGGAAAGGTAGGTTCTTCCCTGAGGAAGATGCGGTAATTCTTTGCTGTGTGCAAAAATTTGGAACAGACTTAAAGAGGATGGTTTATTATTTACCGGGTCGATCTGTAGCCCAGATACGTGCCAGACATCAAATCTTGAGCAAAATGGGAGCATCAACTGTATGGAGTGTTGAAGATGATAAAAAACTTATTGAATTGATGGGAAACCTAAAGTCTAAATTGAACTTTTCAACAGCTACACAATATTTTCCAGGCAGAGACAGAACAAGTATTAGAAGTAGATATGTTACCTTACTAAAATGGATGGAAGAACATCCCAATTTAGGTTTGGAGCATGCACCACGACGAGCCGCGCGACGTTTGAATCATGGGCAGCCCAGTCAAAATTTGCATGAGGCATTAGAGAATTTGAAAAACTCTTTAGTCACAGCTGTCCAAACAAGGGCTAAGAAAATTTGGTTTACTGAAGAGTCTATGCATGCAGACTTAGATGATGCTATGGTTCTGTATCTTGCAAATTGTTTAGTAAAAGAAACAGAAGCTGAATCAAAAACAAGTGCTCCAGATAATGAGCACATTGTCTCTAAAGCATACTTAAATATTACAAACCTGCGCGAAAATATAATATTTTTAAATGCTTGTTTAGATGAGCGTACTTATTTAGATAGCAAATACTATAAAGATTACCCAGCTTTAGGAAGTCATAGTCAAGAGCGGTCTTTAGTCAAAGTGAAAGCCTATTCCCGGAAGAACTCAAGCCCACTTGCTAAAGAGAGCACTAGAGATGCTCCTAATGTTTGGGGAAAACCTCTTCTTTTTGAAAGCACACAAGCGATATGCCAACGAAGATATGTGTTGCCTCCACAACTGTCCAATATAACTGGTATTAAAGTAATAATGGCATGTGTGATGGCAAATTGTTCATACGGTGACTCTGTCAACATTAATGTGCTTTGCAGTTATAACAAACTATTGAAGGAGCAATTAGATAAGCTTCTAGATCGATTCTATGCTTTGTTCACATGGCCAATGATCTTATCTAACGAGCCGCCTAATGAAAGCTCTGTATCAAATACACCTAGAACCGATTCTGTTTTTATCAGACGTCCAACATTGCCAACTACACCTGAAGTTACAATAAATTTCAAAAGTTTAAAGAAATTCAAAAATGTAGATGTCACAGAAACTATAGATCTCAATGAAGCTGAAGCTAAGAAAATTGTGATTGATGTTGAAGAAAATATAGAGGATACTAGTGATAAGAATTTTGAAAAACTTCTTTGTGATACAAGTAGCTTGGAATATATTGTACCCTCAATTTAG
Protein Sequence
MDDHIFSETDTNSEVDSDVEPENWKRLKQLINENDDLHSDHSDQPTTTTHTLQNTTINSESITEQDRLKLALSINKTLDEKMIEMERLFTYRLRECKEKLNEVHRSASLLNEKNKTFRYISCGRPYFRDRQNFPAPDNDDAKMAKSQMYDFSLLTPAPGWTVKDKSQMISVIHEMSIDLKKNELYAKIETLKGNNKLSKIQKRQIMAIRKEIDSVSKLPISKVALPIEQDYDWDILTKMLSRRHTAQEYQALWKLFLHPTINKNTWTNTEHAKLQQIACVYRKQDWESIARTLNSGRTGYQCFVYHQTSIDRSSTQNKWTNEEIIYLKRLVEHFKEGLYIPWGKVAAAMENRTKIQIYNKYMRLIEQRKGRFFPEEDAVILCCVQKFGTDLKRMVYYLPGRSVAQIRARHQILSKMGASTVWSVEDDKKLIELMGNLKSKLNFSTATQYFPGRDRTSIRSRYVTLLKWMEEHPNLGLEHAPRRAARRLNHGQPSQNLHEALENLKNSLVTAVQTRAKKIWFTEESMHADLDDAMVLYLANCLVKETEAESKTSAPDNEHIVSKAYLNITNLRENIIFLNACLDERTYLDSKYYKDYPALGSHSQERSLVKVKAYSRKNSSPLAKESTRDAPNVWGKPLLFESTQAICQRRYVLPPQLSNITGIKVIMACVMANCSYGDSVNINVLCSYNKLLKEQLDKLLDRFYALFTWPMILSNEPPNESSVSNTPRTDSVFIRRPTLPTTPEVTINFKSLKKFKNVDVTETIDLNEAEAKKIVIDVEENIEDTSDKNFEKLLCDTSSLEYIVPSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01117162;
90% Identity
-
80% Identity
-