Basic Information

Insect: Orthosia gracilis
Gene Symbol: -
Assembly: GCA_947562075.1
Location: OX387277.1:10494902-10530625[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00036 0.034 15.4 2.8 1 23 443 465 443 465 0.99

2 5 0.14 13 7.2 1.5 1 23 483 506 483 506 0.89

3 5 0.0053 0.5 11.7 0.4 2 23 513 534 512 534 0.95

4 5 6e-05 0.0057 17.8 0.2 2 20 542 560 542 561 0.95

5 5 0.00011 0.011 16.9 7.8 1 23 577 599 577 599 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00036	0.034	15.4	2.8	1	23	443	465	443	465	0.99
2	5	0.14	13	7.2	1.5	1	23	483	506	483	506	0.89
3	5	0.0053	0.5	11.7	0.4	2	23	513	534	512	534	0.95
4	5	6e-05	0.0057	17.8	0.2	2	20	542	560	542	561	0.95
5	5	0.00011	0.011	16.9	7.8	1	23	577	599	577	599	0.95

Sequence Information

Coding Sequence: ATGGTGGACTATCGTTCTCCCGTGTCACATTTCGTTCCTCACGAACTTTACAACGCACGGCAGTCTAAGCAGGAGCGCATCAGTGCCGGTAAGAACTTACTGTTTGTCGCAGTGCCTCTGACGGTGGACTATCGCTCTTCCGTGTCACACTTCATTTCTCACGAGCTGTACAACGCGCGGCAGCCTAGACAGGAGCCCATCAGTGCCGCTGAAACCAGCGATCCGCCGACTCCTATCAAGCGAAAGAGGGGCAGACCCAGAGTGGACAAGACCAGCCCTGAGTATCTCGCCAACTTGGCGGCCAGGAAACAGGCCAAGGAGATGGCCGCAATGATGAATAACAGGACCCCAGAAAGTGGGGAAAAGCGTAAGCGCGGCAGACCACGCGTGGACAAAACTAGCCCAGAGTATTTGGCTAGGAAGAGGGCACGAGAGTTAGAAGCACTGGAGCGAAAGGCCAAGAGAGAGTACAAACGTCGCACAACCGGAGATTCTGCAGCCTCGTCTTCTGCTGGCGAATCTACTCCGAGGACCAAGAGAAAATATACTAAGCGGACGCCGAGTGCTAAGAAAGACACTCCCCCCTCGACGGAGCAGCGCGTGAAGGGCAAACGAGGCAGACCGAGGAAGGTGGACCAACTTGCAGTAAACAACAAGTTGCAACAACAACCTAAGATTCGCGTAAGAAACAATCTGATGCCCGTCAACTCTGAACCTATTACACTCGACAGTGATGATGAACCTGATCTAGGTTCGCCAAGCCAAGCATCAGACTCGCTGAGTTTGGACGAAAACCTGCGAGCGTTGAGACATATTCACGAGAAATATGCTAATATTGATAAGGATGATCTCTACGGTACACACTTGCTAGCCGCCAACTTCAAGAAGCCGCACGACTCTCTGCGAAGGGGTGACGATGATGAGGTCCTCTCCGTTAGGAGTTCTGAAGGAGGCGCCTCAGGAAAGGAGATGGAGACTCGAGTGGAGAAACTCGAGGACAGTTCCGGATCCGACTCCGATAGCAGTAGTTCTGGATCTGGCAGTTCAAGCTCCGGATCCAGTTCATCGTCGAGCTCCGACTCCTCCAGTTCATCAGACAGTTCCGACTCGGAATCAGAGTCTGATAACGAGAAACCCAAGACTGAACCAGGACCGGCGGCCAATCATACTACTAATGAGGATGACAGGTCTTTCGGTGCATGGTCGTACAGCGGGCCGGCTTCCGACAGCGGATCCGACTCGGATCCCGAGCGCGCGGCTGATCCGGCAGCGTTAGCATCGCACGATGAGATCAGTGAATCCGAAAACGAATCTGCGGATAAGAGCTTCCAATGCCATATCTGTTCGAAGTGGTATTCCACGAGAGTGACACTCAAAATCCATCGCCGCGTCCATCAGAACCGCGGTGGCGGCAACTCGCGGTCGCGCGCGCGTTCCTCCGACAGATACGAGTGCGATTGCTGCAGCGAAACATTCAACCGGCGCGAGAAACTATATGAACACAAAGCGGCAGCGCACCGCGGCGCCATGACGGTGCGGTGCGAAGTGTGCCGGAAATGCTTCGAAGACGACGCGGAGCTAGCCGCGCACGATCGCACCCACACCGCTGATGAGCGAGCTGGGCGATGTCCCCAGTGCGGGCTGACGTTCCCGCGGTACGAGCAGCTGCGCCGCCACCTGACGTGCGCGCACGGCGCCGCGCCGCCGCCCGGCTCCGCGCGCCTGCCGCACGCGTGCGCGCAGTGCGGCAAGCGCTTCTCGCACGCGCACTCGCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTCTGCAAGGTGAGTCTAGTGCCGCCGCCCGGCTCCGCGCTTCTGTCTTCTTCGTTTGGTTTGAGGATCCTCACTTTTCAAAGGAGATTGCAGGATTTTACACCCTGTTCCGCAAACCTCCAAACTGTTTTTCGATGTGATGCGGATAAATGA
Protein Sequence: MVDYRSPVSHFVPHELYNARQSKQERISAGKNLLFVAVPLTVDYRSSVSHFISHELYNARQPRQEPISAAETSDPPTPIKRKRGRPRVDKTSPEYLANLAARKQAKEMAAMMNNRTPESGEKRKRGRPRVDKTSPEYLARKRARELEALERKAKREYKRRTTGDSAASSSAGESTPRTKRKYTKRTPSAKKDTPPSTEQRVKGKRGRPRKVDQLAVNNKLQQQPKIRVRNNLMPVNSEPITLDSDDEPDLGSPSQASDSLSLDENLRALRHIHEKYANIDKDDLYGTHLLAANFKKPHDSLRRGDDDEVLSVRSSEGGASGKEMETRVEKLEDSSGSDSDSSSSGSGSSSSGSSSSSSSDSSSSSDSSDSESESDNEKPKTEPGPAANHTTNEDDRSFGAWSYSGPASDSGSDSDPERAADPAALASHDEISESENESADKSFQCHICSKWYSTRVTLKIHRRVHQNRGGGNSRSRARSSDRYECDCCSETFNRREKLYEHKAAAHRGAMTVRCEVCRKCFEDDAELAAHDRTHTADERAGRCPQCGLTFPRYEQLRRHLTCAHGAAPPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKVSLVPPPGSALLSSSFGLRILTFQRRLQDFTPCSANLQTVFRCDADK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00364412; iTF_00038200;
90% Identity: iTF_00364412;
80% Identity: -