Basic Information

Insect: Orthosia gracilis
Gene Symbol: -
Assembly: GCA_947562075.1
Location: OX387275.1:30790913-30802863[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0004 0.038 15.2 0.2 2 23 143 164 142 164 0.93

2 11 0.00058 0.055 14.7 2.4 1 23 170 192 170 192 0.96

3 11 6.6e-05 0.0063 17.7 0.3 1 23 286 308 286 308 0.98

4 11 8.5 8.1e+02 1.6 0.1 2 23 315 337 314 337 0.88

5 11 0.0006 0.057 14.7 0.0 3 23 387 408 385 408 0.90

6 11 0.00019 0.018 16.2 0.1 1 23 423 445 423 445 0.97

7 11 1.4e-05 0.0013 19.8 0.2 1 23 477 499 477 499 0.98

8 11 0.00062 0.059 14.6 0.2 1 23 505 527 505 527 0.97

9 11 0.00035 0.033 15.4 0.3 1 23 533 555 533 556 0.95

10 11 0.018 1.7 10.0 1.7 1 23 569 591 569 591 0.96

11 11 0.029 2.7 9.4 0.0 1 20 741 760 741 763 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0004	0.038	15.2	0.2	2	23	143	164	142	164	0.93
2	11	0.00058	0.055	14.7	2.4	1	23	170	192	170	192	0.96
3	11	6.6e-05	0.0063	17.7	0.3	1	23	286	308	286	308	0.98
4	11	8.5	8.1e+02	1.6	0.1	2	23	315	337	314	337	0.88
5	11	0.0006	0.057	14.7	0.0	3	23	387	408	385	408	0.90
6	11	0.00019	0.018	16.2	0.1	1	23	423	445	423	445	0.97
7	11	1.4e-05	0.0013	19.8	0.2	1	23	477	499	477	499	0.98
8	11	0.00062	0.059	14.6	0.2	1	23	505	527	505	527	0.97
9	11	0.00035	0.033	15.4	0.3	1	23	533	555	533	556	0.95
10	11	0.018	1.7	10.0	1.7	1	23	569	591	569	591	0.96
11	11	0.029	2.7	9.4	0.0	1	20	741	760	741	763	0.93

Sequence Information

Coding Sequence: ATGGACGGGGAAGCTGAAGATTTCAACCTCCAATGGGAGGAAGAAGTTGAAGTGAAGCATAGTCCAGGTGGAGTTGAGGAGTCAGAAGAAGTGATATCAGGTCTAGAAAACGAGCAGCATACAGGATATGCCAATATGACAGAGGAGGAAATGATGAGCACAGACCAAATGGCTGCGGAAAACTTAATGTTTTTATCTCAAGATGTCGTGAGCTTTACTGAGACGGCCGAACTTGCCGATGACCCTAGCGTGGAATGTGTCACGGAAGAGGTTATTACAGATGATTGGGTGATTCCTGATGGGCAGGAAAGAGTCGAAGTTCCTATGGATCATCTGAATAACGCTGATTTGGTTCCGAAAGAAGAAAATGACCTTGATGTTCCTTTACCAACAGATCAAGATGAATACACAGCGATGCGACCATGGCCCTGCGACTTTTGTTCCCGGCGGTTTCGTAAGAAGGCCGCTCTCATGAATCACATGGTGGCCCATCAGAACGACCGGCCGCACGCGTGCAACTTGTGTGGCGTGCGATACGTACGGAAATGTGACCTTATGAACCATCTCAAGGTTCACGCGTTTGTGCCTGAGAACGCCGATTCCATAGACTATGAAGATGTTTTAGACAATAACCAAATTGTAAAACCAAAGAAGAAACGAGGTCGACGGAAAAAGAATCCTGAACCTGTGGAGGAGGAGAACGACGGCATGTGGGAGAACATGACGTCTGCGCGCACGCAGCAGTGGCAGCGGCGCGCACGCTCGCCTGCGCGGCCGCCGCCCACGCCGCCGTCGCCGCCCGCCGCGCCCCCGCCGCCCTCGCCGCCGCCCCCGCCCAGCGACCCCTCGCGCCCCTTCGTGTGCAGGCACTGCGGCGTCGGCTTCGCGAGGGAGAAGGCACTGCAGTCACATGCTAGGGTGCACGGCGGTGACTCTCCGGTAGAGTGCGGTTCGTGTGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGGCGTCGCACATGGCGCAGCGCCACCCGCACCTGCCACCGCGTGACCAGGCGCCCGACCCGCCCTACGAAGACTCCGACTCGGGTGACGACATGGAGTATCGCCTTTCTCCCCTGTCGCACGGTGTTACCGAGCGCGCGGTGTACGACACGATGCGCGGCCCCGAGCTGTTCTGTCAGGACTGCGGCGTCGCCTTCCAGCGAGCTGACCTGTTGAGGAGACACGTGGCTGCAGCTCACAGTTACAAGCGACACGACAGCTCAAGCAGCACCTGGGCGGAGCACACGTGCGACGTGTGCGGCGAGGGCTTCACGGACGCGCTGCAGCTGCTGGCGCACGCAGAGACGCACGCAGAGCGGCACCGCGCGCCGCACTCACAGCCCAGGTTAAAAAGAATGGGTCGAGGTCGAAACAATACGTCATCATCGAATAATTCACGGCAATTCCCTTGTAGGGTATGTGGCAAGGTGTTTGGTTCACGAAGTTCGCAACAGATCCACATCCGTATACACACGGGCGAGCGGCCGTACGCGTGCCGGTTTTGTTGGAAAGCGTTCGCGGATGGCGGCACGCTACGGAAGCATGAGAGAATACATACGGGCGAGAAGCCGTACGCATGCGCGGTGTGTCCACGCGCATTCAACCAACGTGTCGTGCTACGCGAACATGTGCGCTCACATCACTCCGCCCCAGATCGACGCGCTAACGGTGGTCCCGCATACTGCTGTGTAGTATGTGGGCGCACTCTCCACTCTAGCAACGAACTGGTGCAGCATCTCATACAGCACTGCGATGCCAACACGGCGCTCAAGAGACAACCCCAGACGGGGCCACGAAAGTATAAGAGACGACGAAAACTGAAGACCGAGTCCCCGGCGACGCCGCGCGACTGGGAGCGCACCTCCCCCTCCCCACCGCCCGTGTCGCGCTCCCCCTCCCCCTTGTCCGACACGCCGCAGCTGTCGCCCGCCTCGCCGCCCTCCCCGGCGTCCCCCGCGTCGCCCGCGCGCCGGCGCCGGCGCCGCGCCTCGCCCGCGCCGCGCCCCCGCATGATACACACGGAGGAGCGGCCGCCCGCGCGCCGCCGCCGGGCGCCCGCCCGCGCGCCCTCCCCGCCCTCCCCGGCGCGCACGCGGCCCGTTCGGCGCCGGCCGCCGCGCCACCCCGCAGACGACCTGCGCGCCATTGGGCCGCGCGAACCGTCGGCCGAGCCGGCGCCGGACGCCAACGGCCCCTACAAGTGCGAGATGTGCGCGCTGGAGTTCCCGCGGCGCGACGCGCTGCTGCTGCACGTGCCGGTGCACATCTGA
Protein Sequence: MDGEAEDFNLQWEEEVEVKHSPGGVEESEEVISGLENEQHTGYANMTEEEMMSTDQMAAENLMFLSQDVVSFTETAELADDPSVECVTEEVITDDWVIPDGQERVEVPMDHLNNADLVPKEENDLDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPENADSIDYEDVLDNNQIVKPKKKRGRRKKNPEPVEEENDGMWENMTSARTQQWQRRARSPARPPPTPPSPPAAPPPPSPPPPPSDPSRPFVCRHCGVGFAREKALQSHARVHGGDSPVECGSCGELCWSREALASHMAQRHPHLPPRDQAPDPPYEDSDSGDDMEYRLSPLSHGVTERAVYDTMRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSSSSTWAEHTCDVCGEGFTDALQLLAHAETHAERHRAPHSQPRLKRMGRGRNNTSSSNNSRQFPCRVCGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAYCCVVCGRTLHSSNELVQHLIQHCDANTALKRQPQTGPRKYKRRRKLKTESPATPRDWERTSPSPPPVSRSPSPLSDTPQLSPASPPSPASPASPARRRRRRASPAPRPRMIHTEERPPARRRRAPARAPSPPSPARTRPVRRRPPRHPADDLRAIGPREPSAEPAPDANGPYKCEMCALEFPRRDALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01119598;
90% Identity: iTF_00925081;
80% Identity: -