Basic Information

Insect: Orthosia gracilis
Gene Symbol: -
Assembly: GCA_947562075.1
Location: OX387266.1:2959306-2991047[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.3 8.9e+02 1.5 1.5 6 15 58 67 55 70 0.76

2 16 0.34 32 6.0 0.2 1 23 497 519 497 519 0.95

3 16 6.7e-05 0.0064 17.7 0.4 1 23 532 554 532 554 0.97

4 16 7.3e-05 0.0069 17.5 1.4 1 23 560 582 560 582 0.99

5 16 1.5e-05 0.0014 19.7 2.4 1 23 589 611 589 611 0.99

6 16 2.9e-06 0.00027 22.0 0.4 1 23 617 639 617 639 0.93

7 16 6.4e-08 6.1e-06 27.2 0.1 1 23 645 667 645 667 0.98

8 16 1.5e-05 0.0014 19.8 2.1 1 23 673 696 673 696 0.96

9 16 0.00014 0.013 16.7 2.6 1 23 702 725 702 725 0.96

10 16 0.0001 0.0095 17.1 2.3 2 23 732 753 731 753 0.97

11 16 1.4e-05 0.0013 19.8 1.0 1 23 759 781 759 781 0.97

12 16 0.1 9.5 7.7 0.0 1 22 787 808 787 808 0.96

13 16 0.1 9.5 7.7 0.0 1 22 858 879 858 879 0.96

14 16 0.1 9.5 7.7 0.0 1 22 929 950 929 950 0.96

15 16 0.1 9.5 7.7 0.0 1 22 962 983 962 983 0.96

16 16 0.1 9.5 7.7 0.0 1 22 1033 1054 1033 1054 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.3	8.9e+02	1.5	1.5	6	15	58	67	55	70	0.76
2	16	0.34	32	6.0	0.2	1	23	497	519	497	519	0.95
3	16	6.7e-05	0.0064	17.7	0.4	1	23	532	554	532	554	0.97
4	16	7.3e-05	0.0069	17.5	1.4	1	23	560	582	560	582	0.99
5	16	1.5e-05	0.0014	19.7	2.4	1	23	589	611	589	611	0.99
6	16	2.9e-06	0.00027	22.0	0.4	1	23	617	639	617	639	0.93
7	16	6.4e-08	6.1e-06	27.2	0.1	1	23	645	667	645	667	0.98
8	16	1.5e-05	0.0014	19.8	2.1	1	23	673	696	673	696	0.96
9	16	0.00014	0.013	16.7	2.6	1	23	702	725	702	725	0.96
10	16	0.0001	0.0095	17.1	2.3	2	23	732	753	731	753	0.97
11	16	1.4e-05	0.0013	19.8	1.0	1	23	759	781	759	781	0.97
12	16	0.1	9.5	7.7	0.0	1	22	787	808	787	808	0.96
13	16	0.1	9.5	7.7	0.0	1	22	858	879	858	879	0.96
14	16	0.1	9.5	7.7	0.0	1	22	929	950	929	950	0.96
15	16	0.1	9.5	7.7	0.0	1	22	962	983	962	983	0.96
16	16	0.1	9.5	7.7	0.0	1	22	1033	1054	1033	1054	0.96

Sequence Information

Coding Sequence: ATGAACCTGTGTTGTTTTATCTGCAACATCAAAGCTGGTCTCTCACTTCGGAATGCTTCAAGCCTGTTTGGAGAACATAACACTTTGCAATCCGGCAAGAAAGTATCGGAGGTCGTGAGCGAGATTGTTGGCAAGCCCGTTATAGAGAATAAAGTACACACTAATATATTGTGTAAGAAATGCTTTAAGACTTGTTCGGAGTATGACAGCATTCAAGTCAGATTACAAACAATAAAAACAGATCTACTGGGACAATTCAAAAAATCATTGCCCAGCCATAATCTAGACTATGATAACTATGAGAAGACAGTTTGTTCGCCGCCGAAACCCAAACCAACCATGGGCAAGAAGCTTGTGTTGCCGGCATCGAAGTTACAACCTATACCACCGGATTTATTGCTGAAATGTGGGATCAAAGCTTCGTTCTCCAAGCCTAATATGATATTGCCACAAGTGAAGCCGACCACAGCATCAACACTAAACCTAAAAGTAACCGTTGGATCTTCAGTCCTCACACAAACAATAAAAACTTCAACCAGTAAACCAGTTGAAAAACCTGCTTTAGACTCAAATTCTATACTCAATTCACTGTCAAATGCCTTGAAAGAGGACCTGGATGATATGGTGACTAGTCAAAGCACTATGACCCCTATGAACCAAAAGAATTCGATTTTAAGTTTCAATGTGAACTCTTTGCCAAAGGATTTTCTTTCTGGGGCCATTTTGAGAAAGATTGATGCAAAAGATGATGTTGATGAAAAAGGAGAAGAGACAACTGATGATCATCCTATGGAGATTGATGAGGATTGTCTTTCTGTGGTTCCTGTATCGAGTGCTTCCGGTGGAAACTTAGTACTAGAAGTGGAAGAGCTACAGACAAAATCCGAACCCGCTCCCGAGGTAAGCGAATACTTGAACTTACCATCGCTAGACGGGACAGACGGTGAATTGAATGAAGCACAGAAGTACATCCTCGGAAAACTGGAGATACTCAACGAAGGTGATGAAGACGATGATGATGATGAAGGACACACAATAGTGGTAGACAGTGAAAACGGCTCGATTCTCCGGATGGTGGCCGGACAGAAGTTTATATACGAAGGCGGAGAGATATCTCTGGTGATGCCCGATGATGATGAGCACCAGGAAAACGATGGTGATCATTTGGAGAACGGGGATAGTCAAGATTCTAATGATGAATCTCAGATAGAGTTGCAAGTGTCTGGTGACGAAGAAACGGCGAACGCTATTATCGCTGCGGCTCAAGAACAAGGCGGTGCCTTCATAAAAGTGGAATCAGGCGAGATGTTCCGCGTGAAATCCGTGTCCAGTGCCTTGGAGAGACAAGACGCACCCTTACAGATCGTGGCGCAGGAAGGCAACCTGTTCAAATGTCTCCTGTGCGAGAAGAACGATGAAACCCCACCAAGTGTAGAAGATGCAGATACGATGATGCGACATTTGAAGTCAGTCCACGACGCCAGAATATACTTGTGTCGCTTCTGCGGTGTTGTGATGAGGAGACGTACGGAATATGCAACGCATATAGCCTCACATGCAAACGACAGCTCCCAAAGCACATCCCGACACGCGCATCGCTGCGGCGTGTGCGGCAAGAGTTACAGTTCACGAACTCTGCTAGCTGAACACGCCAACATACACTCCGGTGCGCGGCCCTACGTGTGCACTGTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCATCAAGCTCATCTGAAGACCCATGCGGTTCGGCCGCGTCCCTACAAATGCACACAGTGCGGCAAATCGTTCCTCACACAACAAAATCTGAATCAGCACGAGAAAACACATTCTGGAGTCAAGGATTTCGTGTGTAATATATGCAATAAAGCCTTCAGCACACAACACAACCTAGAAGTCCACGGCGTGGTTCATTCTGGGAACAAGGCGTTTGTGTGTAGCGAGTGTGGCAAGGCCTTCGCGAGGCGGGCGGAGCTCAGGGATCACATGCGCATACACACTGGTGAGCGTCCATTCTCATGTGACATCTGCGACGCTCGCTTCAGTCAGCGCTCCAACCTGCACTCTCACCGGCGCGCCACGCACTTCGATGACAAGAGATACCACTGTGACCTGTGTCCCAAGAGGTTTAAGAGGAGGAGGTTACTAGAATACCACATAAAGGCGTCGCACACCGGCGAGCGACCTCTGAAGTGCGGCATCTGTCACCTGTCCTTCGTGTACCCCGAGCATTACAAGAAGCACGTCCGGATACACAGCGGGGAGAGGCCTTACGTTTGTGAGATCTGCGGCAAGTCGTTCAACTCTCGCGACAATCGCAACACGCATCGCTTCGTGCACTCCGACAAGAAGCCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCGTACGTATCACAATACCACACAACACACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCCGTACGTATCACAATACCACACAACACACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCGTACGTATCACAATACCACACAACTCACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCCGTACGTATCACAATACCACACAACTCACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCGTACGTATCACAATACCACACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCGTACGTATCACAATACCACACAACTCACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCCGTACGTATCACAATACCACACAACACACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCGTACGTATCACAATACCACACAACTCACAACAAACCTTACGAGTGCGTCGCATGCGGCGCCGGCTACATGCGCAAACAGCTGCTCTACGCGCACATGAACACCAGCTGAAATCAGAAGCGGAAGTGAACCTAGCAGATGCAAAGTTCTACATCACAGAAGATAAGAAGTTAATATTACAAGATAGTGATAAAACAACACTGAATTTAATACAAGAAGGCGATGAATCAACGTTGCTAACTATACATAACATAGGAGAGAGAGCTGAAGGCACTATTCTAGAAGCGGTGGATGTCGATCAACTTGGAGAACAGACTGAGATCGTTGCTAACGACGAAAACGGCGGTATGGTGCGTCTCATACAAATCAAGCTACCGGACGGAAACAACGGTTGGGTCGCCATTAACCGTTGA
Protein Sequence: MNLCCFICNIKAGLSLRNASSLFGEHNTLQSGKKVSEVVSEIVGKPVIENKVHTNILCKKCFKTCSEYDSIQVRLQTIKTDLLGQFKKSLPSHNLDYDNYEKTVCSPPKPKPTMGKKLVLPASKLQPIPPDLLLKCGIKASFSKPNMILPQVKPTTASTLNLKVTVGSSVLTQTIKTSTSKPVEKPALDSNSILNSLSNALKEDLDDMVTSQSTMTPMNQKNSILSFNVNSLPKDFLSGAILRKIDAKDDVDEKGEETTDDHPMEIDEDCLSVVPVSSASGGNLVLEVEELQTKSEPAPEVSEYLNLPSLDGTDGELNEAQKYILGKLEILNEGDEDDDDDEGHTIVVDSENGSILRMVAGQKFIYEGGEISLVMPDDDEHQENDGDHLENGDSQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVKSVSSALERQDAPLQIVAQEGNLFKCLLCEKNDETPPSVEDADTMMRHLKSVHDARIYLCRFCGVVMRRRTEYATHIASHANDSSQSTSRHAHRCGVCGKSYSSRTLLAEHANIHSGARPYVCTVCGKAFASKYTHQAHLKTHAVRPRPYKCTQCGKSFLTQQNLNQHEKTHSGVKDFVCNICNKAFSTQHNLEVHGVVHSGNKAFVCSECGKAFARRAELRDHMRIHTGERPFSCDICDARFSQRSNLHSHRRATHFDDKRYHCDLCPKRFKRRRLLEYHIKASHTGERPLKCGICHLSFVYPEHYKKHVRIHSGERPYVCEICGKSFNSRDNRNTHRFVHSDKKPYECVACGAGYMRKQLLYAHMNTSVRITIPHNTQQTLRVRRMRRRLHAQTAALRAHEHQPYVSQYHTTHNKPYECVACGAGYMRKQLLYAHMNTSVRITIPHNSQQTLRVRRMRRRLHAQTAALRAHEHQPYVSQYHTTHNKPYECVACGAGYMRKQLLYAHMNTSVRITIPHNKPYECVACGAGYMRKQLLYAHMNTSVRITIPHNSQQTLRVRRMRRRLHAQTAALRAHEHQPYVSQYHTTHNKPYECVACGAGYMRKQLLYAHMNTSVRITIPHNSQQTLRVRRMRRRLHAQTAALRAHEHQLKSEAEVNLADAKFYITEDKKLILQDSDKTTLNLIQEGDESTLLTIHNIGERAEGTILEAVDVDQLGEQTEIVANDENGGMVRLIQIKLPDGNNGWVAINR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -