Basic Information

Insect: Orthosia gracilis
Gene Symbol: -
Assembly: GCA_947562075.1
Location: OX387269.1:13097067-13116144[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.7e-05 0.0082 17.3 1.5 1 23 432 454 432 454 0.96

2 20 0.0042 0.4 12.0 0.6 1 20 460 479 460 482 0.94

3 20 2.1e-05 0.002 19.2 5.6 1 23 501 523 501 523 0.98

4 20 9.8e-05 0.0093 17.1 4.1 1 23 529 551 529 551 0.99

5 20 3.7e-05 0.0035 18.5 5.3 1 23 557 579 557 579 0.97

6 20 8.5e-06 0.00081 20.5 7.4 1 23 585 607 585 607 0.97

7 20 7.2e-07 6.8e-05 23.9 2.9 1 23 613 635 613 635 0.97

8 20 0.0001 0.0097 17.1 6.7 1 23 641 663 641 663 0.97

9 20 0.0001 0.0096 17.1 6.5 1 23 669 691 669 691 0.97

10 20 4.9e-07 4.7e-05 24.4 1.9 1 23 697 719 697 719 0.98

11 20 9.7e-06 0.00092 20.3 7.7 1 23 725 747 725 747 0.98

12 20 0.00013 0.012 16.7 6.8 1 23 753 775 753 775 0.97

13 20 2e-06 0.00019 22.5 4.2 1 23 781 803 781 803 0.98

14 20 6.7e-06 0.00063 20.8 5.0 1 23 809 831 809 831 0.96

15 20 2.2e-06 0.0002 22.4 4.9 1 23 837 859 837 859 0.98

16 20 3.1e-06 0.00029 21.9 6.0 1 23 865 887 865 887 0.98

17 20 6e-05 0.0057 17.8 7.9 1 23 893 915 893 915 0.97

18 20 3.3e-05 0.0031 18.7 6.6 1 23 921 943 921 943 0.97

19 20 0.00073 0.07 14.4 0.3 1 23 950 972 950 972 0.96

20 20 0.31 30 6.1 4.9 1 23 983 1005 983 1005 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.7e-05	0.0082	17.3	1.5	1	23	432	454	432	454	0.96
2	20	0.0042	0.4	12.0	0.6	1	20	460	479	460	482	0.94
3	20	2.1e-05	0.002	19.2	5.6	1	23	501	523	501	523	0.98
4	20	9.8e-05	0.0093	17.1	4.1	1	23	529	551	529	551	0.99
5	20	3.7e-05	0.0035	18.5	5.3	1	23	557	579	557	579	0.97
6	20	8.5e-06	0.00081	20.5	7.4	1	23	585	607	585	607	0.97
7	20	7.2e-07	6.8e-05	23.9	2.9	1	23	613	635	613	635	0.97
8	20	0.0001	0.0097	17.1	6.7	1	23	641	663	641	663	0.97
9	20	0.0001	0.0096	17.1	6.5	1	23	669	691	669	691	0.97
10	20	4.9e-07	4.7e-05	24.4	1.9	1	23	697	719	697	719	0.98
11	20	9.7e-06	0.00092	20.3	7.7	1	23	725	747	725	747	0.98
12	20	0.00013	0.012	16.7	6.8	1	23	753	775	753	775	0.97
13	20	2e-06	0.00019	22.5	4.2	1	23	781	803	781	803	0.98
14	20	6.7e-06	0.00063	20.8	5.0	1	23	809	831	809	831	0.96
15	20	2.2e-06	0.0002	22.4	4.9	1	23	837	859	837	859	0.98
16	20	3.1e-06	0.00029	21.9	6.0	1	23	865	887	865	887	0.98
17	20	6e-05	0.0057	17.8	7.9	1	23	893	915	893	915	0.97
18	20	3.3e-05	0.0031	18.7	6.6	1	23	921	943	921	943	0.97
19	20	0.00073	0.07	14.4	0.3	1	23	950	972	950	972	0.96
20	20	0.31	30	6.1	4.9	1	23	983	1005	983	1005	0.99

Sequence Information

Coding Sequence: ATGAATCAGGATCATCATAATATGAATACGGGTGGTGGCCAGCCTCCGGGAAGTTCTGAGTCACAGGTTCAAAGAATTCAAGCCACTCAGCAGCAACAACAGAATAACTTGCCTGCCACGACATCTGCTACTGATTTGCGAGTGAACTCAGCTGCAGTGAACGTTGCTTTGTCTAGTGTCGCGAAATACTGGGTGTTTACAAATTTATTTCCCGGACCTATACCACAAGTGTCTGTGTACGGATTACCTGCCGGAGCTAGGATTGAAAATGGGAAGCCTGTCCAGGACCTTGGGCAAGCTCATGCAAGTATACTGAATGGGGATCCAAATATAATACTGGGGCATCATGCAGGCCAATCTCAAGTCACAGTATCTGCTGCTGGAGGTCAGCAGATACCAGTTTCACAGATCATTGCCACACAGTCGGGACAAACTCATGAAGCTCTCGTGGCCCACAGTCATCAGCAGGCTGAACTGGCGGCGGTCCAAGCCTCCGTAAACAACGCGCAGGTGTCAGTTAGTGCAGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGACACCATTCCCAACAACACATAATGCAGCAGCAACTAATGGCGCAGGCGCGACCAGAACATAGCAACCAACAGATTCAACTGACGGTAAGCGAGGACGGCATAGTCACGGTGGTGGAACCGGCAGGAACAAAAATGGTTGACAAGGAGGAACTCCATGAGGCCATCAAAATGCCCAACGACCACACGCTCACAGTACACCAGCTGCAGCAGATTGTGGGGCAACAGGTCATAGACAGCGTAGTACGCATTGAGCAAGCGACTGGTGAGCCAGCCAACATCTTAGTGACCCACAATCCTGACGGCACAACCTCCATAGAAGCCAGCGCTGCTGACCCTATGATTGTCAAGGACGAGAAGAATTCTAACAAAATAGAGACCGCACAATTTGCTATACCTGCTGAGATAAAGGATATTAAGGGGATTGACCTGAAGAGTGTAGGAACCATGGGCATGGAAGGTGCAGTCGTGAAGATCTCAGCCGGCGCGTCAGAACACGACCTTCACGCAATGTATAAAGTAAATGTAGAAGATCTGTCACAACTGCTTGCCTACCATGAAGTCTTCGGAAAACTTAACTCGGAAGGGCAGCAGCAGCAACAAGCAAAGGTAATAAGCGAGGTGGAAGTAGAAGTGGAACCCGGCACCAGCGCAGCTATGTCTGCAGAAGAATCGTCGCCAGGCCACCATGCATGTGATATTTGCGGGAAAATATTCCAGTTCCGATACCAACTCATTGTTCATAGGCGTTATCACGGTGAAAGTAAACCGTTCACGTGTCAGGTTTGCGGTTCCGCATTTGCTAATCCTGTCGAATTATCCAGGCATGGGAAGTGCCATCTTGCTGGAGACCCGAACGAACGACACGCCAAGAGGATGGCGCAAGATAAGCCATACGCATGCACGACTTGCCACAAAACGTTCTCCCGTAAAGAACATTTGGACAATCATGTTCGAAGTCACACTGGAGAAACTCCTTACAGGTGCGAATTCTGCGCAAAGACTTTCACCCGCAAAGAGCACATGGTGAATCATGTGCGAAAACACACGGGTGAGACTCCGCACCGATGTGACATCTGCAAGAAGAGTTTCACAAGGAAAGAACACTTCATGAATCATGTTATGTGGCATACAGGAGAGACGCCGCACCATTGTACGATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACTCCTCACCGTTGCGACTTCTGTTCAAAGACATTCACTCGTAAAGAGCATCTTCTGAATCACGTTCGTCAGCACACGGGCGAGTCTCCTCACCGCTGCAACTTCTGTAGCAAGTCGTTCACAAGGCGGGAACACCTCGTCAACCACGTGAGACAACACACCGGGGAAACGCCCTTCCAGTGCGGATACTGTCCTAAAGCGTTCACGAGGAAGGACCACCTCGTGAACCACGTCCGCCAGCATACAGGCGAATCCCCGCACAAGTGTTCGTACTGCACAAAATCGTTCACTCGCAAGGAGCACCTGACGAATCACGTGCGACAACACACGGGCGAGTCTCCACATCGATGTACTTTCTGCGCCAAGTCCTTCACGAGGAAGGAACATCTAACCAATCACGTCAGACAGCACACGGGAGAAACGCCACACAAGTGCACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAGCACCTCAACAACCACATCCGCCAGCACACCGGCGTCACGCCGCACGCCTGCTCCTACTGCAGCAAGAGCTTCACCAGGAAGGAGCATCTCGTTAACCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCATCTCAATAACCACGTGAACCTTCACACTGGAGCTACGCCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGAAAAGAGCATTTGACCAACCATGTCAGAATTCACACGGGAGAGTCTCCGCACCGCTGCGACTTCTGCCAGAAGACGTTCACTCGCAAGGAGCACTTGACAAACCATCTGAAGCAGCACACCGGCGACACCGCACACGTCTGCAAAGTGTGCTCTAAGCACTTCACCAGGAAAGAGCATCTTGTCACGCACATGAGGGCGCACAGTTGTGGGGAGCGTCCATTCAGTTGCGGCGAGTGCGGCAAATCTTTCCCGTTGAAAGGCAATCTACTGTTCCATGAACGATCGCACAACAAGAACAATGCCAATGCCAATAAGCAATACCGGTGTGAAGTCTGCTCTAAAGAATTCCTCTGTAAAGGCCATTTGGTATCTCATCGGCGCACACACGCGGCATGGGCGGAAGGTGCTGCGACCGGCGAGACACCCGCTGAAACAGAAGACTGTACTGATAATAAATGCATCAAAGTTGAGCCAGAACGAACTGAAAGGAAACATGAAATTAGGACGTCAGTCGAAACTAGACCGGCTGAGAGCAATGTCGCACAAAGTCAACCAAACACACCCACTGTGATGATAACTAATAATCAACAAGTACGGCCAGCGAACGTGAGCGCAGTGGGAGCGGTAAGCGGGGTGGGCGCAGTGGGCGCGGGCGTGGCGGCCTCGTTCGTGGGCGCGGTGGGCGCAGTGGGCGCGCCGCACCACGCCGGCGCCAACATCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQDHHNMNTGGGQPPGSSESQVQRIQATQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAAGGQQIPVSQIIATQSGQTHEALVAHSHQQAELAAVQASVNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHIMQQQLMAQARPEHSNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPMIVKDEKNSNKIETAQFAIPAEIKDIKGIDLKSVGTMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQQAKVISEVEVEVEPGTSAAMSAEESSPGHHACDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVTPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLNNHVNLHTGATPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRAHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANANKQYRCEVCSKEFLCKGHLVSHRRTHAAWAEGAATGETPAETEDCTDNKCIKVEPERTERKHEIRTSVETRPAESNVAQSQPNTPTVMITNNQQVRPANVSAVGAVSGVGAVGAGVAASFVGAVGAVGAPHHAGANIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -