Ogra000727.1
Basic Information
- Insect
- Orthosia gracilis
- Gene Symbol
- -
- Assembly
- GCA_947562075.1
- Location
- OX387264.1:11769540-11769947[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-09 1.8e-06 28.3 0.0 4 41 17 55 14 57 0.94
Sequence Information
- Coding Sequence
- ATGGTTCGCCACTATAAAAAAACAACGGACAAGTCATACACAATGGCAGAATTGCAGCAAGCAGTGGAAGATGTCAAAAATAAAGTAATGACGAGTTACCAAGCTGCAGAAATAAATGGCATTCCTAGATCAACCATTGTAACTAGAGTTTACAATAATCATATGAACGACAACGTTGGAAGACCTATAGCTCTCGGGGAAGATGTGGAAAGAAGAATTGCCCATAGCTTACATGTTATGGAAAAACATGGTTTCCCGTTAACTAGAAAAGAAGTAGCTGTTTTAGTATCTCAATATGTCCGCCAAAATGGAATCGACAATCCCTTCAAAAATGATTTGCCAGGAAAAGACAACGTTTATATGACCGATTGTAGATTTAGGACGAGGGGTGCTCTGGTTCTATTTTAA
- Protein Sequence
- MVRHYKKTTDKSYTMAELQQAVEDVKNKVMTSYQAAEINGIPRSTIVTRVYNNHMNDNVGRPIALGEDVERRIAHSLHVMEKHGFPLTRKEVAVLVSQYVRQNGIDNPFKNDLPGKDNVYMTDCRFRTRGALVLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00446056; iTF_00825610; iTF_00825644; iTF_00825613; iTF_00825614; iTF_01230484; iTF_00407514; iTF_00071326;
- 90% Identity
- iTF_00446056;
- 80% Identity
- -