Ogra006601.1
Basic Information
- Insect
- Orthosia gracilis
- Gene Symbol
- kn
- Assembly
- GCA_947562075.1
- Location
- OX387270.1:8385625-8405937[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-54 3.4e-50 171.8 0.0 11 148 23 150 14 157 0.89
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGCACCACCAGGAGGCGGCGGGCGGCATCCACGCTCAGCCGCGAGGACCCGTCACCTCTCTGAAGGAGGAACCGCTCACCCGCGCCTGGATGACCCCTACCTCGCTAGTTGATAATACCAACAGCGTAGGCGTGGGTCGAGCGCACTTCGAGAAGCAACCGCCCAGCAACCTGCGCAAGAGTAACTTCTTTCACTTCGTGGTCGCGCTATACGACCGCGCGGGACAACCTGTCGAGATTGAACGGACCGCCTTTATTGGGTTCATTGAGAAAGATCAGGAAGTCGAAGGGCAAAAGACGAACAATGGCATCCAGTACAGACTTCAATTACTTTATGCAAATGGTATCCGACAAGAACAAGATATATTCGTTCGACTCATCGATTCGGTGACGAAACAGTTAGACCTAAAAAGGCATCATCATCAGACCTCTGATAACTGTCCATTGCTGGACAGAGGTCTCCGAGGCTCCGAAGCGTCGCCAAATTATTAA
- Protein Sequence
- MFGLHHQEAAGGIHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQLDLKRHHHQTSDNCPLLDRGLRGSEASPNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00708963;
- 90% Identity
- iTF_00448806;
- 80% Identity
- iTF_00809844;