Basic Information

Gene Symbol
-
Assembly
GCA_949775005.1
Location
OX459047.1:18782707-18785076[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 4.1 1.3e+04 -1.6 0.0 4 19 159 174 157 196 0.81
2 6 2.9 9.3e+03 -1.1 0.0 22 33 231 242 227 247 0.82
3 6 7.9e-08 0.00026 23.1 0.1 1 38 262 301 262 306 0.94
4 6 5.8e-09 1.9e-05 26.7 0.1 2 44 316 362 315 364 0.94
5 6 2.5e-09 8.3e-06 27.9 0.0 1 41 368 408 368 412 0.95
6 6 1.7e-05 0.055 15.6 0.0 3 45 420 464 418 465 0.88

Sequence Information

Coding Sequence
atgAACATTGAGGACCTCGAATATGATTCTGAGAATGAGACCGATTCGGAAGTCGACAGCGATGTGGAACCTGAAAACATGAAGCGGCTAATTCAGCAAAAGAACAATGGTAACGACACCAGTAATCGGATTTTACATAGTCTTCCTTCTCTCCAGAACACTACAATAAACAGTGAGTTATCAGCAGAACAAGCTCAACTACGTCTAACATTGtctgaaaacaaaatattagaCGAAACGCTAATTAAACTGGAAAGAATTATGACTATACGTCTAAATGAGTGCAGGAGCAGATTAAAAGAGATACAATGTAGTGAAAGTCTACGAAatgagaaaaatgaaaatttccgCTATATCAGCTGTGGTAGGCCCTACTTTAAAGATAAACAGAACTTCCCCGCGCCAGATAATGATGATGCCAAAATGGCAAAAACGCAAATGTACGACTTCTCCATGATAAAATCAGCACCGGGTTGGACAGTAAAAGACAAGTCTCAACTGGTTAGTGTGATCCATAAAATGTCAATAGATATTAAGAAAAACGAGCTGTTTGCTAAAATTGATTCCTTGAAACGGACTACGAAATCACCCAAAAAACTGGAAGAAGAAATAATGGTCATTAGAAAGGAAATTGATATAGTAAGTAAATTGCCTCTAAGTAAAGTAGCTCTCCCAATCGACCAGGAGTATGATTGGTACATTGTAGCAAACAAGTTAAACGGGAGGCACACAGCCAAAGAGTATCAAGCCCTCTGGAAGTTATTCCTTCATCCTACAATTAACAAAAATACTTGGGGCAAGTCTGAACATGCAAAATTAACTCAAATTGCTTGCGAGCACCATATGCAAGATTGGGATGCTATTGCGCGCAAACTCAATACTGGCCGAACTGGGTATCAGTGCTTTGTGTACCACAAGACAAATATGAACAACCCTTATACTGGAAAGAAATGGACTGATGAGGAGGAAATATACCTTACCAGATTGATAGCGCATTTCAAAGAAGGCACCTTCATTCCATGGGGTAAAATAGCTGCAGCAATGGAAAACCGCACTAAAACCCAAatctataataaatatacaagaCTCATTGAACAAAGGAAAGGCAGGTTCCTCCCTGAGGAAGATGCGGTAATTCTTAACTGTGTGCAAAGATTTGGAACCAACTTTAGGAGGATGGTTAATTATTTACCAGGCCGATCTTTGTCCCAGATACGTGCCAGACATCAAGTCTTGAGCAAATTGAGAGTGTCAACTGTATGGACTGTTGAAGATGATAAGAAACTAATTCAATTGATGGGACATCAAGAATCTAAAATGAACTATTCAACAGCTACACAATACTTTCCTGGCAGAAACAGAACAAACATTAGATCTAGATACATTACCTTAATGAAATGGATGAAAAAACATCCCAATTTAGATTTGGAACATGCACCGCGACGAGGGGCAAGACGTTTGAATCATGGGCGGCCCAGTGAAAACTTGGATGAGGCACTAGAGAATTTGAAAAACTCGTTAGTCACAACTATTCAAACTAAGGCCAAGAGAACGAGGCTTACTGAAGACTCCACACACGCAGACATAGATGATGCTATTGCTGtgtattttgtaaattctttgaCAAAAGAAACAGAAGCAGAATCAAAGGAAAGTGCTCCAGATAATCATTTAGTTTTAGGTCCTGACCACATTGTCTCAAAATCAGCCCTAAATGTTACAAACCTgcgcaaaaatataatatttttgaatgcttCTCTAAATGAGTCTACTTATATAAAGAGCAAGTACTATATAGATTATCCAACTTTAGGTGATAATACTCAAGATGTTCCTTTAGTTAAACTGAAATCCTATTCACGGAAAAACTCAAGGTTAACACCTATACTGGTTAGAGACACTCCTAATGTTTGGGGAAAACCTGCGCTTTTTGAAGGCACACAAAAAATGTGCCAACGAAAATATGTGTTCCCCCCGCAACTGTTTACTATAACAGGTATTAAAGCAATAATGGAATATGTGGAGCAAAATGTTCACTATACTGGCTCTATCAATGTGCATGTGCTTTGCAGGCGGAACCCATTTTTGAAGCAGCAATTAGATAAGGTCCAAGAACGATTCTATGTTTTGTTCACTTGGCCAATGATCTTAACCAACGAGCCACCTAAAAAAAGCACTTCAGAAACACCTAGAACACATTCTGTTTTTATCAGACCTCCAATATTGCCAACTGCGCCTGAAGTTACAATAAATGTTAAATGttataagaaatttaaaaatgttgatgtctCGGAAAATATCGATCTCAATGAAAATGAAGCTAAGAAACCAAAGATTGCTGTTGAGGAGATTATAGGAGATAAGTGGTGA
Protein Sequence
MNIEDLEYDSENETDSEVDSDVEPENMKRLIQQKNNGNDTSNRILHSLPSLQNTTINSELSAEQAQLRLTLSENKILDETLIKLERIMTIRLNECRSRLKEIQCSESLRNEKNENFRYISCGRPYFKDKQNFPAPDNDDAKMAKTQMYDFSMIKSAPGWTVKDKSQLVSVIHKMSIDIKKNELFAKIDSLKRTTKSPKKLEEEIMVIRKEIDIVSKLPLSKVALPIDQEYDWYIVANKLNGRHTAKEYQALWKLFLHPTINKNTWGKSEHAKLTQIACEHHMQDWDAIARKLNTGRTGYQCFVYHKTNMNNPYTGKKWTDEEEIYLTRLIAHFKEGTFIPWGKIAAAMENRTKTQIYNKYTRLIEQRKGRFLPEEDAVILNCVQRFGTNFRRMVNYLPGRSLSQIRARHQVLSKLRVSTVWTVEDDKKLIQLMGHQESKMNYSTATQYFPGRNRTNIRSRYITLMKWMKKHPNLDLEHAPRRGARRLNHGRPSENLDEALENLKNSLVTTIQTKAKRTRLTEDSTHADIDDAIAVYFVNSLTKETEAESKESAPDNHLVLGPDHIVSKSALNVTNLRKNIIFLNASLNESTYIKSKYYIDYPTLGDNTQDVPLVKLKSYSRKNSRLTPILVRDTPNVWGKPALFEGTQKMCQRKYVFPPQLFTITGIKAIMEYVEQNVHYTGSINVHVLCRRNPFLKQQLDKVQERFYVLFTWPMILTNEPPKKSTSETPRTHSVFIRPPILPTAPEVTINVKCYKKFKNVDVSENIDLNENEAKKPKIAVEEIIGDKW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

80% Identity
-