Basic Information

Insect: Orthonevra nobilis
Gene Symbol: -
Assembly: GCA_963555765.1
Location: OY743226.1:2086695-2088730[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.5 5.1e+02 2.0 0.3 2 11 7 16 6 19 0.82

2 14 0.62 70 4.7 0.2 2 23 178 202 177 202 0.80

3 14 1.9e-05 0.0022 18.9 2.5 1 23 208 230 208 230 0.98

4 14 3.6 4.1e+02 2.3 0.2 2 10 236 244 235 246 0.84

5 14 0.19 21 6.4 0.5 2 17 265 279 265 280 0.84

6 14 0.00011 0.012 16.6 4.9 1 23 294 316 294 316 0.98

7 14 3.3e-07 3.8e-05 24.5 0.2 1 23 322 344 322 344 0.98

8 14 1.5e-05 0.0017 19.2 3.9 2 23 350 371 349 371 0.96

9 14 0.00097 0.11 13.6 2.5 2 23 379 401 379 401 0.93

10 14 3.1e-05 0.0036 18.2 3.1 1 23 426 448 426 448 0.99

11 14 6.7e-07 7.6e-05 23.5 1.4 1 23 454 477 454 477 0.97

12 14 5e-07 5.7e-05 23.9 1.2 1 23 483 506 483 506 0.93

13 14 2e-06 0.00023 22.0 0.5 1 23 512 534 512 534 0.98

14 14 2.8e-06 0.00031 21.6 0.5 1 23 540 562 540 562 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.5	5.1e+02	2.0	0.3	2	11	7	16	6	19	0.82
2	14	0.62	70	4.7	0.2	2	23	178	202	177	202	0.80
3	14	1.9e-05	0.0022	18.9	2.5	1	23	208	230	208	230	0.98
4	14	3.6	4.1e+02	2.3	0.2	2	10	236	244	235	246	0.84
5	14	0.19	21	6.4	0.5	2	17	265	279	265	280	0.84
6	14	0.00011	0.012	16.6	4.9	1	23	294	316	294	316	0.98
7	14	3.3e-07	3.8e-05	24.5	0.2	1	23	322	344	322	344	0.98
8	14	1.5e-05	0.0017	19.2	3.9	2	23	350	371	349	371	0.96
9	14	0.00097	0.11	13.6	2.5	2	23	379	401	379	401	0.93
10	14	3.1e-05	0.0036	18.2	3.1	1	23	426	448	426	448	0.99
11	14	6.7e-07	7.6e-05	23.5	1.4	1	23	454	477	454	477	0.97
12	14	5e-07	5.7e-05	23.9	1.2	1	23	483	506	483	506	0.93
13	14	2e-06	0.00023	22.0	0.5	1	23	512	534	512	534	0.98
14	14	2.8e-06	0.00031	21.6	0.5	1	23	540	562	540	562	0.99

Sequence Information

Coding Sequence: ATGTGCTCGGTTGAGAGTACCTGCCGGACGTGTGGAAAATCATCTGAACAGGAGGATGGTTCGGATCTTTTTCCAATGTACACTTCCTCAGAATACCACAATGAACTTAAAATGATTCAAGAAGAGTTTGAAATATGGAACCTCAATATTGCTCAGGGAGATGGATTACCTCAAAAGATTTGCTTGACATGCTTCGATAGCTTTTGCCAAATTCACAACTTCCGGATAATCTGTCAAGAAGCACAAATTAATTATGGCGAACTGTGCACCGGGCTGGACATAATCATAAAAGTCGAACCTGAGTTTGGTGACCTAGATGTCGACTTCCCTGAAGATTTTGAAGGTGAGCAGACAATAACTGTGCAGGAGCACTACAGGTTTCCAGGCGATGAGCCACAGAAAACACTCGATTCAATTGTGGAAACAcaatcgtttgaaaaaaatagtgcaaCCCAATATGAGAATGATCTCGTAGATGATGAAGATGCGATCGAAGAACTGAATGCGACTGTTCCCGAATTCAAAATGTTCCAATGCGAATTTTGCATGGACGTCGTCAGTTTCGATGATCCAGACCTTCTTAATGAGCATTACAACGTTCTGCACTCATCTGACCAACCATATCCATGTCCAAAGTGTGACAAATGCTTCAACACAAAAGGCAAACGAAATAGCCATGCTAGAATTCACTTTCGAATCGTTCTTGAATGCGAAACATGCGGAAAGAAAGTGCGCGGTGGCAAACGAATGATGGCTCAGCACAATGAATTGCATCACGTCGAAAAGGCTCGACAGTGTACAACGTGCGGGaaggaatttcaaaaaattacctTAAAAAGGTTCCATTACCACATGAGTTGGCATGACGACTCCAAGCTACACAAATGTAAGTATTGCGAAAAGAAGTTCATCCAAATAACTCATTTGGTGGTCCACGAGAGAACGCACACTGGAGAGAGTCCATTCGTTTGCAGCGATTGTGGTGCTGgatttaaaaactCTGGCTTGCTAAACAATCACATGAAAATGCACGGCTTGAGAGAGATTGAGTGTCCCCATTGTCCGAAAAAATTCTATCACAAACATGGCTTGAGGGTGCACATGGAACTTCATAATCCGAACAGGAAAATTCCTCGCTGTGAAATTTGTGACAGGCCTTTTCGCTCCACAATGAATttgcgtatacacaaccataagAGGCACGGTGTAGCAGCATCGCAATCGGTTTTCAATGTTTTGAGAAAACGTGAAACTaaggaaaaatttataaagccATACAAATGTAGCAAGTGTCCACAAACATTTGTGCTGCATACGCAACTGGCTAAGCACTTAAAAACCCACGATGAGCATAGACCATATACTTGTGACGAATGCGGGAAGTCGTTTAAGCGTGATGCTCATCTGAAATTGCATGTTAATTCGCTGCACTTGAACAAAAAGCCACATAAGTGTCCCCACTGCGGATGGGCGTTTTCACAAAGGAATAATCTCAGGGAACACATTGCTGCAAAACATGAGGATAAGAGGGATTTCAAGTGTGAAATATGCGATAAAGCTTTCGCAATTTCGAAATCTTTGAAGACTCACATGCTGAATCACGTAGACAGGAAGCCATATGTATGCAAGATCTGTGGCAAAAGTTTCAAACAATTGGCTATCCTCAAATACCACATAAATacacatttaaagaaaaacgagGTTGATGTAGATGCTGGTGATATAACGGAcgttgttctttaa
Protein Sequence: MCSVESTCRTCGKSSEQEDGSDLFPMYTSSEYHNELKMIQEEFEIWNLNIAQGDGLPQKICLTCFDSFCQIHNFRIICQEAQINYGELCTGLDIIIKVEPEFGDLDVDFPEDFEGEQTITVQEHYRFPGDEPQKTLDSIVETQSFEKNSATQYENDLVDDEDAIEELNATVPEFKMFQCEFCMDVVSFDDPDLLNEHYNVLHSSDQPYPCPKCDKCFNTKGKRNSHARIHFRIVLECETCGKKVRGGKRMMAQHNELHHVEKARQCTTCGKEFQKITLKRFHYHMSWHDDSKLHKCKYCEKKFIQITHLVVHERTHTGESPFVCSDCGAGFKNSGLLNNHMKMHGLREIECPHCPKKFYHKHGLRVHMELHNPNRKIPRCEICDRPFRSTMNLRIHNHKRHGVAASQSVFNVLRKRETKEKFIKPYKCSKCPQTFVLHTQLAKHLKTHDEHRPYTCDECGKSFKRDAHLKLHVNSLHLNKKPHKCPHCGWAFSQRNNLREHIAAKHEDKRDFKCEICDKAFAISKSLKTHMLNHVDRKPYVCKICGKSFKQLAILKYHINTHLKKNEVDVDAGDITDVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -