Basic Information

Insect: Orthonevra nobilis
Gene Symbol: -
Assembly: GCA_963555765.1
Location: OY743227.1:69376171-69378249[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.3e-05 0.0015 19.5 2.6 2 23 211 232 210 233 0.95

2 11 0.00011 0.012 16.6 0.0 1 21 286 306 286 307 0.97

3 11 3.7e-06 0.00042 21.2 0.3 1 23 315 337 315 337 0.97

4 11 0.25 29 6.0 2.8 2 23 342 364 341 364 0.90

5 11 6.8e-07 7.8e-05 23.5 1.7 2 23 371 392 370 392 0.98

6 11 3.3e-07 3.8e-05 24.5 0.4 1 23 398 420 398 420 0.95

7 11 7.8e-07 8.9e-05 23.3 1.5 1 23 426 448 426 448 0.99

8 11 1.1e-05 0.0012 19.7 0.8 1 23 454 476 454 476 0.98

9 11 0.001 0.12 13.5 1.0 3 23 484 504 482 504 0.98

10 11 3e-05 0.0034 18.3 3.4 1 23 510 532 510 532 0.99

11 11 0.00057 0.065 14.3 0.1 1 23 538 560 538 560 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.3e-05	0.0015	19.5	2.6	2	23	211	232	210	233	0.95
2	11	0.00011	0.012	16.6	0.0	1	21	286	306	286	307	0.97
3	11	3.7e-06	0.00042	21.2	0.3	1	23	315	337	315	337	0.97
4	11	0.25	29	6.0	2.8	2	23	342	364	341	364	0.90
5	11	6.8e-07	7.8e-05	23.5	1.7	2	23	371	392	370	392	0.98
6	11	3.3e-07	3.8e-05	24.5	0.4	1	23	398	420	398	420	0.95
7	11	7.8e-07	8.9e-05	23.3	1.5	1	23	426	448	426	448	0.99
8	11	1.1e-05	0.0012	19.7	0.8	1	23	454	476	454	476	0.98
9	11	0.001	0.12	13.5	1.0	3	23	484	504	482	504	0.98
10	11	3e-05	0.0034	18.3	3.4	1	23	510	532	510	532	0.99
11	11	0.00057	0.065	14.3	0.1	1	23	538	560	538	560	0.98

Sequence Information

Coding Sequence: ATGGCATTGGAAATAACAAAAATCTGTAGGGCCTGTCTAGCGCTAGAGGGTGTTCTCCTATCCATCTACGACAATAAAGGCTCTTCGGGTACAAGTGGATGTGTTGCGGATATGCTCGGATACCTTACAAATATTCAAcccaAAAGATTCGACGGTTTACCTGAGAGAGTTTGTTTTGGTTGCATCAGTGAAATTAATCGCTGCTattctttcaaaatcaaatgcgAAAACTCCGACAGAACACTTAGGCAGTTGCTTGAAATTCCAGAAGATGTGACAGAAGAAGAAATGGATGAAGATGAGGAAGAGGAGGAGGTTGAGGACGTAAAGAAGAAGTCATACGAGCATCCGAAGGAGCAGAATATGGGCggtgttaaaattgaaaacgacGAATCTCATTCCACTGATTTGAATGAAATGTTTGCACTTCAAGCTGAAGAGGAACTGGAGGCCTCTTACTTTGTTATCGGCTCGGAAGGTGATGATAATGATAACGATGTAGATAAAACCATTCAGAACCAAGACGAAAGTAGTATCGATGTACATCAGGAGGAACCGCAACAAATCGAGAGTGATACGCGAATTGAGCCCGTGAAAAGGCGCGTTCTTCCGCAGAAGAAAGAGGAAATCAAGTGTCCTCACTGCCCGATGACGTTCGTACTGCAAAGAAACCTGGAGAAACACATTAGTAGACATCACAGTAACCAGGAAGAAGTTAATGTTGCTAGTCGAGTTTCTATGGAAGAGGGTAAATCGACTCTTTCCTCAGCTCAAAATACGGACCTGAGTGATGCAATTACAATAGAGAATAAGCCATTTGTGAAACGTAGACAAGAGGACGAATCAATAAATAGATATCAATGTGAGCAATGTGGCGCCGGATTTGCGCTTCCTAAGTCTCTTAAAATCCACATGAGACAAGACAAGTGCACCGTTGAGAAGTTTACGTGCCGCAAATGTCAAAAAGTGTTCATTTCGGCAGAGAATCTTAAAGCACACGTTGCTTCCCATAGAGATGAGCTATCCTGTCATGCATGCCACAAGGTCTTCCATGAAATGGAAGAACTCCACGAGCACATAGCAGACGCTCATACTGTCAAGAAGAAAAATCAGTGTCCAAAATGCAAACGAGtttttacAATGCTCTCCACTTTGAAGGATCACATGCGAACCCACAGCGGCGAGAAACCATTTCTCTGTTCAATCTGCGGCAAGGGCTTCAGTCAGAATGCAAATCTCAAGCAGCACGTCATGCGGCACAGTAAAACCAAACCTTTCAAGTGCGAGCATTGTCCCCGAGCATTCGTCAGCAAAGGCGAACTCTTCTCCCACCTTCGCAGTCACACCGGTGACCATCCGTTTGTTTGTGAATTCTGCAAGGCGGCGTTTACAACATCCAGCACTTTGGTCAAACACAAACGCATCCATACGGGTGAACGACCATATGGCTGCGATTTCTGTCCAATGCGATTTACAGCGCTCAATACGCTCAAAAATCATCGGCGCACGCACACCGGCGAGAAGCCATACAAATGCAATACATGCAATCGAGGATTTGCCCAAAAGAGTGACTGCGCGAATCACATGCGAACACACACTGGGGATAAAAGGTATGTCTGCCAGGTCTGCGGTTCCATGTTCCTGCAGGTGGGCAGTCTGCGTACTCACATGCGAATTCACTTGAAGACAGAATTAAAGTCATCTTTTGAACTGCAGGAGAAAGCAGATATGGAGGAAGAAGCAGAATCTCATGCGGAAGTAGTAACCATGTCCGCAGAGGAAATGGATCAAGATCCGGAAAAGGACCAACAAGAGGCCGAGGAGAAAAGGTCCTTTAGAACGCTGACAGAGgacttgaatgaaaatgaactgCTTAACTATGCCATTGAGGAGTGCTCAAGCGATAATGAATACAGCGCAGATTCTTCGACGCTGAACTag
Protein Sequence: MALEITKICRACLALEGVLLSIYDNKGSSGTSGCVADMLGYLTNIQPKRFDGLPERVCFGCISEINRCYSFKIKCENSDRTLRQLLEIPEDVTEEEMDEDEEEEEVEDVKKKSYEHPKEQNMGGVKIENDESHSTDLNEMFALQAEEELEASYFVIGSEGDDNDNDVDKTIQNQDESSIDVHQEEPQQIESDTRIEPVKRRVLPQKKEEIKCPHCPMTFVLQRNLEKHISRHHSNQEEVNVASRVSMEEGKSTLSSAQNTDLSDAITIENKPFVKRRQEDESINRYQCEQCGAGFALPKSLKIHMRQDKCTVEKFTCRKCQKVFISAENLKAHVASHRDELSCHACHKVFHEMEELHEHIADAHTVKKKNQCPKCKRVFTMLSTLKDHMRTHSGEKPFLCSICGKGFSQNANLKQHVMRHSKTKPFKCEHCPRAFVSKGELFSHLRSHTGDHPFVCEFCKAAFTTSSTLVKHKRIHTGERPYGCDFCPMRFTALNTLKNHRRTHTGEKPYKCNTCNRGFAQKSDCANHMRTHTGDKRYVCQVCGSMFLQVGSLRTHMRIHLKTELKSSFELQEKADMEEEAESHAEVVTMSAEEMDQDPEKDQQEAEEKRSFRTLTEDLNENELLNYAIEECSSDNEYSADSSTLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -