Basic Information

Insect: Orthonevra nobilis
Gene Symbol: -
Assembly: GCA_963555765.1
Location: OY743224.1:127885093-127894161[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7.8e-05 0.0089 17.0 0.2 3 23 117 137 116 137 0.97

2 10 8.7e-07 9.9e-05 23.1 1.2 1 23 143 165 143 165 0.99

3 10 2.5e-06 0.00029 21.7 2.6 1 23 171 193 171 193 0.98

4 10 2.8e-06 0.00031 21.6 0.2 1 23 200 222 200 222 0.99

5 10 1.2e-05 0.0013 19.6 1.1 1 23 228 250 228 250 0.97

6 10 1.9e-05 0.0022 18.9 0.2 1 23 257 279 257 279 0.99

7 10 4.2e-07 4.8e-05 24.1 1.4 1 23 285 307 285 307 0.98

8 10 0.00029 0.033 15.2 0.3 1 20 313 332 313 335 0.93

9 10 7e-06 0.0008 20.3 1.1 2 23 342 363 341 363 0.97

10 10 3.1e-06 0.00035 21.4 0.9 1 23 369 392 369 392 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7.8e-05	0.0089	17.0	0.2	3	23	117	137	116	137	0.97
2	10	8.7e-07	9.9e-05	23.1	1.2	1	23	143	165	143	165	0.99
3	10	2.5e-06	0.00029	21.7	2.6	1	23	171	193	171	193	0.98
4	10	2.8e-06	0.00031	21.6	0.2	1	23	200	222	200	222	0.99
5	10	1.2e-05	0.0013	19.6	1.1	1	23	228	250	228	250	0.97
6	10	1.9e-05	0.0022	18.9	0.2	1	23	257	279	257	279	0.99
7	10	4.2e-07	4.8e-05	24.1	1.4	1	23	285	307	285	307	0.98
8	10	0.00029	0.033	15.2	0.3	1	20	313	332	313	335	0.93
9	10	7e-06	0.0008	20.3	1.1	2	23	342	363	341	363	0.97
10	10	3.1e-06	0.00035	21.4	0.9	1	23	369	392	369	392	0.97

Sequence Information

Coding Sequence: ATGTTCGAACAGCAAATCAAATCGGAGCCATTGACTTATTATTCTACATGCCCACCTCCCCCCCAGGAGGCTCATCAATCTATTCGAACTCAAAATTCACATCATgttcaacagcaacagcaaaatcAACAGACCAATCAACACCAGCAACGGTCAGTTATTACGACTATcgacaataaaaacaacatactGCATCCACAAATATTGTTGGCTCAGCAGTCAAGTACCCCCATATCTGTTGTTGCTGATGGATTGAAGCCAGAGATCATCCAATCGAATGTCATGTCAATATCATTATCATCAACTAATAGCACTGGATCTGGACAATCTAGAAGTAAGCCTCAAGCATGCAAGGTCTGTGGTAAAATGCTATCATCTGCTAGCAGCTATTACGTACATATGAAACTGCACTCTGGGACTAAACCATTTCAGTGCACAaTATGTGAAGCTGCGTTCTGTAGAAAGCCTTACCTTGAAGTGCACATGCGAACGCACACGGGCGAACGGCCGTTTCAGTGTGAACTGTGTTTAAAGCGATTCAGCCAAAAATCGTCACTAAACACACACAAGCGTATTCACACAGTTCAAGATCGCCCCTTTCAATGTGAACAGTGTCCAGCTACATTTGCACGTAAACCTTACCTTGATATACACATGAGAACGCATACCGGCGAACGTCCATTCGAATGTGATGTATGCCTGAAACGTTTCACCCAGAAGTCATctttaaatattcacaaaactGTTCATAATGTGGGGATACGGCCATTTCAGTGTACTCTATGCCCAGCTGCATTCGTGCGGAAGCCTTATCTTGATATCCACCAGCGTACACATACTGGAGAAAGACCTTTTGAATGTGAAATCTGTTCCAAACGATTTTCACAACGATCAactttaaatattcataaacGAATCCATACAGGTGAGAGGCCCTATGCATGTGATATTTGTAACAAGACGTTTGCCGTTAAAAGCTATGTAACCGCACATCGGTGGTCGCATGTCTCGGAAAAACCTTTGAGTTGTGATCGTTGTTCAATGACATTTACTAGTAAGTCGCAGTTTGCAGTGCATATTCGTACACATTCGGCAGGGCAAAATTTTGAATGTAACGTTTGTGGACGAGCATTTATACGTGATAGTTATCTTATAAGGCATCACAATCGGGTTCATCGGCAAGAGCGAACAACAGCAAATAGTATAGCTACTATCAATAGTGTTGCAACTGGAGAAGATATTGGTAATGCAAGCACTCCGGATCGAGTAGATGTTTTTGAATCAAACAGCCCTCAAGTTTGCGATTTAAGATACGTACCCAATTTAGTTTTAAACAGATCGCCGGTAGTTTCGGAGTTGTCTCCAACTGGCAGCAACCAAACAATAACAATGAATCATCAAGAGAGCAATCGTAATCAATTAAGTTTAAATGAAGTTCGTAGTATGAACATAAGCGAGCGCCTTATACAAGATGCCAGAGTTATTCACGAACGGGTTGTACAAGAGCAACAGCGTGCAATACAGGACAGAGCTAATCAAGAACGTTTAATCCAAGAAACTGCATTCCGGGAAAGAGCGTTACAGGATCAGCAAGCCATACAAGAAAGATTACTCCAAGATTCTGCAGAGCAGGAGAGAGCCATACAAGAAGCAACTGTGCATTCATCTATAAGTATACAACAGGGCCATGTTTTAACtcataataatttattggaTAAATCGTCGGTGATTAGCCCAGGATCTGTCTAA
Protein Sequence: MFEQQIKSEPLTYYSTCPPPPQEAHQSIRTQNSHHVQQQQQNQQTNQHQQRSVITTIDNKNNILHPQILLAQQSSTPISVVADGLKPEIIQSNVMSISLSSTNSTGSGQSRSKPQACKVCGKMLSSASSYYVHMKLHSGTKPFQCTICEAAFCRKPYLEVHMRTHTGERPFQCELCLKRFSQKSSLNTHKRIHTVQDRPFQCEQCPATFARKPYLDIHMRTHTGERPFECDVCLKRFTQKSSLNIHKTVHNVGIRPFQCTLCPAAFVRKPYLDIHQRTHTGERPFECEICSKRFSQRSTLNIHKRIHTGERPYACDICNKTFAVKSYVTAHRWSHVSEKPLSCDRCSMTFTSKSQFAVHIRTHSAGQNFECNVCGRAFIRDSYLIRHHNRVHRQERTTANSIATINSVATGEDIGNASTPDRVDVFESNSPQVCDLRYVPNLVLNRSPVVSELSPTGSNQTITMNHQESNRNQLSLNEVRSMNISERLIQDARVIHERVVQEQQRAIQDRANQERLIQETAFRERALQDQQAIQERLLQDSAEQERAIQEATVHSSISIQQGHVLTHNNLLDKSSVISPGSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00312853;
90% Identity: iTF_01541599;
80% Identity: -