Basic Information

Insect: Orthonevra nobilis
Gene Symbol: -
Assembly: GCA_963555765.1
Location: OY743224.1:5226527-5229731[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00011 0.012 16.6 1.1 2 23 399 420 398 420 0.97

2 16 0.0023 0.26 12.4 1.2 1 23 426 448 426 448 0.98

3 16 0.00023 0.027 15.5 0.6 1 23 454 477 454 477 0.98

4 16 3.5e-05 0.004 18.1 3.5 1 23 492 514 492 514 0.98

5 16 0.00023 0.026 15.5 0.7 1 23 547 569 547 569 0.94

6 16 4.2e-05 0.0048 17.8 1.9 1 23 575 597 575 597 0.98

7 16 8.2e-06 0.00093 20.1 1.0 2 23 703 724 702 724 0.97

8 16 4.7e-06 0.00054 20.8 3.1 1 23 730 752 730 752 0.98

9 16 5.9e-06 0.00067 20.5 0.7 1 23 758 781 758 781 0.98

10 16 0.00012 0.013 16.5 1.8 1 23 792 814 792 814 0.98

11 16 3.4e-05 0.0039 18.1 0.4 1 23 826 848 826 848 0.98

12 16 0.016 1.9 9.7 1.8 1 23 854 876 854 876 0.97

13 16 2.2e-05 0.0025 18.7 0.3 2 23 882 904 881 904 0.95

14 16 0.18 21 6.4 2.7 1 23 912 935 912 935 0.95

15 16 0.65 74 4.7 0.8 3 23 945 966 944 966 0.93

16 16 0.00059 0.068 14.2 1.3 2 23 972 993 971 993 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00011	0.012	16.6	1.1	2	23	399	420	398	420	0.97
2	16	0.0023	0.26	12.4	1.2	1	23	426	448	426	448	0.98
3	16	0.00023	0.027	15.5	0.6	1	23	454	477	454	477	0.98
4	16	3.5e-05	0.004	18.1	3.5	1	23	492	514	492	514	0.98
5	16	0.00023	0.026	15.5	0.7	1	23	547	569	547	569	0.94
6	16	4.2e-05	0.0048	17.8	1.9	1	23	575	597	575	597	0.98
7	16	8.2e-06	0.00093	20.1	1.0	2	23	703	724	702	724	0.97
8	16	4.7e-06	0.00054	20.8	3.1	1	23	730	752	730	752	0.98
9	16	5.9e-06	0.00067	20.5	0.7	1	23	758	781	758	781	0.98
10	16	0.00012	0.013	16.5	1.8	1	23	792	814	792	814	0.98
11	16	3.4e-05	0.0039	18.1	0.4	1	23	826	848	826	848	0.98
12	16	0.016	1.9	9.7	1.8	1	23	854	876	854	876	0.97
13	16	2.2e-05	0.0025	18.7	0.3	2	23	882	904	881	904	0.95
14	16	0.18	21	6.4	2.7	1	23	912	935	912	935	0.95
15	16	0.65	74	4.7	0.8	3	23	945	966	944	966	0.93
16	16	0.00059	0.068	14.2	1.3	2	23	972	993	971	993	0.97

Sequence Information

Coding Sequence: ATGTCTGTCACACTAGATGACACCGTGTGCCGCGTATGTTTGAGCTCCTCGGGAAATATAGCAATATTCGATGGGTGTGGAAAAGATGATCAATTTCGTTATTGTACATCTCTGGAGGCCGCCGAAGATGATGGACTTCCGTCCAAACTTTGCAAGAAGTGCAATGATCACCTGAAGGTAGCCtatgattttcgatttcaggccATATATGCGGAGAAATATTTTCGCAAAACTATTTTCCTGCCGTCGCTGAAGAAGGAGGAGAATGGAGGAGTTGCAACTGCTACGGATGAACCGAATTGCACGGATGAACTGGACGAGAATATGGCCGAGATTGATATGTTGCTGGCGATACACACGGAGGCTGTTGACGAAGTTgacaatgatgatgacgatgtggACAATTCGGGATTCTATGATGAAGAAAGCGTCGATGTCTGTGAAAAACAGGTGGAGGTCATCGGCATGGAAACGTTCGAAAAGGAGCAACGCGAACAAAAAGAGcaaaaagtcaaaattgaaGGTGCAAATGTTCCTCCTGTTGTTGTTTCGACGACAGAGACGGAAAACACGGGGCATCTGACAACGCTTCCATTGATGAACTCGACTATGCAATCTACAAATTCTTTATCGAGTAATGTTAGCGAAGGGCAGCAGCCGCACGTGGAAGTCAGCGGAATTCAACAGTATATGACAGCGAGTCCGTTGTTGACACATAGTGTGCAGAATATTCGCCTGGAACAAGAGGGAAACAGGTCTACGCAGCTGGAAATTATGCCTATTTTGAAGAATGATCCGTCGACATACGATTACAATACTACTACGTCAGTGGTGGCAGAAGCCTACGAAACGTATTCGGCGCCGACGCAAATGCAATTTCAGCAAACCTTACCCATGCATCTTCAATACGATACTGCCTCAACACACCATTCAACGTCAACATTACAGGATTCTGTGGTTCCCACTCACAACTACGAATTTTCCTACCAGCAACAATTCCCTCCATTCCCTACTCAAACTGAGCAGGAGCCAAGTCACGCAGTTCGGCAAGAAGAAGAAATAGAATCAATGGCCGAAGATCCAAGAACTGAAGACATTCAAACCGAAACTACAACAAAGACTGAAAATCTAGAACCCGTCAACCCGAAGCCCAAGAAAGCGAAACGCGAAGCAAATTATCAAAGAGGTAAAATCGAGTGCAATATCTGCGGAAACATCTTCACACATTTGAACTCGCTTAAGACACACCTGCTCAAGCATTCTGGCGAGAAACCCTTTAGGTGCGAGTTCTGCATGAAGGCCTTCGCCAGAAAGACAGTCCTTAACATCCATCGCCGGTTGCACACCGGAGAAAAGCCTTACAAGTGTTCTCTATGCACAAGTGCATATGTTACTAAAGAAGCTCTAACGCGTCACTTGCAAAAGGACCACGAACAGGAAGTAGGTGCCAACTTCCGGAAAGATAAAGTTTCCTACATCTGTTCTATTTGCAACAAATCTCGCTGTTCGAAATACTCTCTGGCCTCGCATATGAAGACGCACTCGAACGAAACGAAGCCCCGCCGTAAGCCTGTTCGTCGGAACAGAGAGAAAGGTGAAGGATCTTTCGGTACCTCAACAAACAGTCTTCTTCTGAAGTATCTTTGCAAAATCTGCCAAAAGGGTTTCACCAGCAAGTGGGAACTGAGCACTCATTCCGAATCGCATGCCATGCATAAGACATTCGAATGCGATATATGTCAGCGAACGTTCGAGAAGAAATTTCAGCTGCTCTATCACTTGCAAACTCATGATGGCGGCGACGAACTATTAAAATCTAAAGTACAGACGTCGGGGAATACCCCACCAGATGTGCCCAGTGAAGCCAACAAGGAAGAGAAACCATCATCGGctgcaaagaaaattaaaaggcGTACATCGACGAGGAAGCGTGGGAAACGAAAAACCACAACTTTAGAAGAGCACACTAAAGATGGTGCAGAAGAGGATGGCAGCAATAACGACGAAGAACACTTCAAGGAACCGCAGTCCAGGAAAAGCACAATAAAGAGATCGACTCGTGCTAAGCGAGAGAATTTGAAAGCGTTGCGGGCGAGCAGTAAAATTGAGTGCCATATATGCGAAGCTGTGTTCACGCATCCAACGTCCCTTAAGACCCACATGCTCGTGCATTCGGGCGAGCGCCCATTCAAATGCGATCACTGTGATAAATCATTTGCAAGGAAAACTGTTCTTAACATACACCGGCGACTGCACACAGGAGAGAAACCCTACAAATGTCCTCTCTGCGACATGGCATGCGTCACCAAAGATGCGCTTATgCGTCACATGTCGAAAGACCATGACGATGATAGAGAAACTGATCGTATAAAGTTCACCTGTGGAATCTGTCACAAGTCGATGGGAACGAAGTACTCCTTGCAAGCCCACATGAAACTTCACGAGCAGAGCACATGGCCAGGCAAACCAGTGAAATACAGTTGCAACACATGTACAGAGTCCTTCGATACTAAGGCTGAATACACTGAACACATGGAGGTGCATGATTCCCATCGGAATTTCCAATGCGACATCTGCCAAGCAACCTTCGAGAAGAAGTTTAAACTACTTTTCCACTTGCAGACGCACAAAATCGAGGACCTCCCCTGCAAGAAGTGCGGTGAGACATTTACAATCAGGGAAAATCTCATTCAGCATATCAAGCTGCAGCATATGGACCCACGCAACATGGATTTCCAGTGTCCGCACTGCCATATTGGACAGTACGATACGCGTGATTTGAAGCTACACATGCTCAACACCCACGACGTAACCATGGGGGGCCTTAACGCGTGTGATTTGTGTGGAGAGAGCCATGCCACAGCCGCCGAGTACTACAAACACATGCACGATAAGCACGACACCATCAGTAAAACGTGCAACGAGTGCGAGAAGTACTTTGACTCGAGGAAGGCATTCGATAAGCATATTTTGACGCACTACATGTAG
Protein Sequence: MSVTLDDTVCRVCLSSSGNIAIFDGCGKDDQFRYCTSLEAAEDDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSLKKEENGGVATATDEPNCTDELDENMAEIDMLLAIHTEAVDEVDNDDDDVDNSGFYDEESVDVCEKQVEVIGMETFEKEQREQKEQKVKIEGANVPPVVVSTTETENTGHLTTLPLMNSTMQSTNSLSSNVSEGQQPHVEVSGIQQYMTASPLLTHSVQNIRLEQEGNRSTQLEIMPILKNDPSTYDYNTTTSVVAEAYETYSAPTQMQFQQTLPMHLQYDTASTHHSTSTLQDSVVPTHNYEFSYQQQFPPFPTQTEQEPSHAVRQEEEIESMAEDPRTEDIQTETTTKTENLEPVNPKPKKAKREANYQRGKIECNICGNIFTHLNSLKTHLLKHSGEKPFRCEFCMKAFARKTVLNIHRRLHTGEKPYKCSLCTSAYVTKEALTRHLQKDHEQEVGANFRKDKVSYICSICNKSRCSKYSLASHMKTHSNETKPRRKPVRRNREKGEGSFGTSTNSLLLKYLCKICQKGFTSKWELSTHSESHAMHKTFECDICQRTFEKKFQLLYHLQTHDGGDELLKSKVQTSGNTPPDVPSEANKEEKPSSAAKKIKRRTSTRKRGKRKTTTLEEHTKDGAEEDGSNNDEEHFKEPQSRKSTIKRSTRAKRENLKALRASSKIECHICEAVFTHPTSLKTHMLVHSGERPFKCDHCDKSFARKTVLNIHRRLHTGEKPYKCPLCDMACVTKDALMRHMSKDHDDDRETDRIKFTCGICHKSMGTKYSLQAHMKLHEQSTWPGKPVKYSCNTCTESFDTKAEYTEHMEVHDSHRNFQCDICQATFEKKFKLLFHLQTHKIEDLPCKKCGETFTIRENLIQHIKLQHMDPRNMDFQCPHCHIGQYDTRDLKLHMLNTHDVTMGGLNACDLCGESHATAAEYYKHMHDKHDTISKTCNECEKYFDSRKAFDKHILTHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -