Onob022721.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orthonevra nobilis
Gene Symbol
-
Assembly
GCA_963555765.1
Location
OY743227.1:56203745-56209036[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.00088 0.1 13.7 2.3 1 23 17 39 17 39 0.98
2 29 1.8e-05 0.0021 19.0 2.0 1 23 46 68 46 68 0.98
3 29 0.46 52 5.1 0.1 2 23 98 119 97 119 0.95
4 29 7.6e-05 0.0086 17.0 1.2 1 23 190 213 190 213 0.91
5 29 0.55 62 4.9 7.7 1 23 220 242 220 242 0.98
6 29 0.64 73 4.7 1.6 2 21 251 270 250 271 0.92
7 29 4.7 5.3e+02 2.0 5.7 1 21 281 301 281 303 0.94
8 29 0.00051 0.058 14.4 0.5 3 23 312 332 311 332 0.98
9 29 0.035 4 8.6 4.4 1 23 346 368 346 368 0.98
10 29 0.5 57 5.0 0.5 1 23 439 462 439 462 0.92
11 29 0.074 8.4 7.6 1.5 1 21 471 491 471 492 0.94
12 29 0.51 58 5.0 2.2 1 20 501 520 501 522 0.91
13 29 0.003 0.35 12.0 3.0 2 23 532 553 531 553 0.98
14 29 3.2e-06 0.00037 21.4 0.9 1 23 559 581 559 581 0.98
15 29 0.0052 0.59 11.3 6.3 1 23 718 741 718 741 0.97
16 29 0.058 6.7 8.0 0.3 1 20 748 767 748 769 0.85
17 29 0.0063 0.72 11.0 2.1 1 23 778 801 778 801 0.97
18 29 0.099 11 7.2 1.7 1 23 811 833 811 833 0.96
19 29 0.0011 0.12 13.4 3.5 2 23 851 873 851 873 0.97
20 29 0.021 2.4 9.3 4.5 1 23 914 937 914 937 0.97
21 29 1.2 1.3e+02 3.9 5.1 1 22 944 965 944 965 0.96
22 29 0.79 90 4.4 0.4 1 23 974 997 974 997 0.85
23 29 0.0012 0.13 13.3 1.3 1 19 1003 1021 1003 1022 0.98
24 29 1.8e-05 0.002 19.0 3.4 1 23 1033 1055 1033 1055 0.99
25 29 1.3e-05 0.0014 19.5 0.3 2 23 1075 1096 1074 1096 0.95
26 29 0.00041 0.047 14.7 4.3 1 23 1102 1124 1102 1124 0.99
27 29 1.2e-07 1.4e-05 25.8 3.6 1 23 1130 1152 1130 1152 0.98
28 29 1.7e-07 1.9e-05 25.4 2.6 1 23 1158 1180 1158 1180 0.99
29 29 0.00039 0.044 14.8 0.2 1 23 1186 1210 1186 1210 0.92

Sequence Information

Coding Sequence
atgaaCACCCGAAGTCAAACGAAGGAAAAACTCTCATCGACTGATCGATTCGAATGTGATTCCTGTGGTAAAACATTTGCTTGGAAAAAAGATTTACATCGCCACGAAAGATACCATCAGCCCAATACGAAGAAGTTCTCATGTCCACATTGTGAACGTCGATTCATACGAAAGGACAAGCTTTCGTCGCATTTGCTTGTACACATGACCGGAATAGCTAAatcgaattttttgaaaaaagtgcaaaatttcGCTCACAATTTGTTTACggataaaaagtttaaagaaatcAAGTGCATGTTATGCAATTATACGGCACCTAATGTACCCGAACTGCGTCAGCATTTAAGCCTGCACAACAACATGGAATTGACTGATGTTTTCTTAAGCAAGAGTGAAGTTGTAAAACGATTTTATCCAGAAAAGAATGGACCGGAAATCGTTCAATTAATTGCTAGTCAAATCAGTAATAACCAGTTTGGAAAATTCTACTCGATTACAAATGTGCACAACTATGAGATGGGTATAAGCGATTCGGATGAAACGGATCCAGAAGAGAAGTCTCCATACGTGTGTGAGCTATGCGATCGGGCATTCAATCGAAAATACAAGCTGATGAACCATCATGCTGATGAGCATACCTTTGACGAATGTCCCTAcaaatgcgaaaaatgtaaattgaaatTCACTTGCCAACGAGTACTAAACAATCACCTGCGGCACCACTGTGAAAATCCCGACAGAGAGTTACAGTGTAAAAAATGTCCTGGTCGATTTACTTGgccaaaaaactttgaaaatcatacgTGTAGCAAGAAAAAATCGCCCATCGCGGAGACATTCTATTGTGAAGTTTGTGAAATGGAGTTCAATTGCCCAAAGGACcttcgaaaacataaaaaatgtcacATACCGGATGGAAAATCTCGTGACTGCAACGTTTGTGGTGAGAAATTCCTTCGCTTGGAGAACTTACGATCGCATTTGAagatgcatttgaaaaaaaatcacaaacactTGCTTCttaaaaacaagtttgtttGTATGCTTTGCCAAAAAGAGTTTCCCACAATTCACAGCTTAAAATGCCACTTGCGCACGCATTCCGACGGTCAGACAGATGTGGATTTCAAAAACTGTGGTTTCGTGAGCAATTTCTTCCCCGATGAAATTGAGCCTAAAGTCGCCGAACGTATTCGAAGTTGTTTCGAAGAACAGAAACTTTGGCGGCTTTATATGGCTGTGAATAAACTCGGCATCGAGTTGGTACTTAGTGACTCCGATAGCGATGATGGGCACAGAAGCACTGAAGCTTACATCTGCGAGTTGTGTGACTTGAAATGTTCTCGGATGCAGGCTATCCTTGAGCATCAGTACGTTGAGCATGACTCAAAAGATGTTAGTTTTCCCCATAAGTGTAGTGTGTGCGACGAACAGTTTGTTTGTGCAGCACTTTTAAGGCGTCATACAAAAAATGAGTGCATGAACTCGGACAGAGTGCATGCGTGTACGAAATGCAATATAAAATTCACTTGGCGACAGAATTTATTAGCGCACAAATGTTTGCGAACTGAAAAGGGCGCAGGCGATAAGAAATGCgaagtttgtggaaaaaaattcgTTTGGTTGAAGGATCTACATCGACATAAGCGTAGTCACATTGATGAGAAAAAGTTCGAGTGTCTAGTTTGCGAAAGGAAGTTCAATCGAAAGGATAATATGCGGGCACACATGAAAGTTCATACAGTTGAGTGTAAGGTGCGTGGAAGACAAGCGCTAAAATGGGACCAACAGGATCAAAACATGTGCAGGCCACATGGAGATAAAGTCATTCAATGTAAGATCTGTATGTCGAAACACGGCTCAATAAGGGATCTTAGCAGTCATTTGTTGTCACACAATAATTTAAGGACGACATTCAAAGAGAACGAAGcggaatttttagaattatcGATGCGACTCTACAACAATCCAATGAACCGCGATGATCTTGCAGAGGCGATAACGAAAGATCTGGCCAACAGCAAAAACGATCGTTTTTACTCGATCACGAATGAAGTAGGCTATGAGTTAAATTTAGCTGATTCCGAGACCTGCAGCGACTTGGATGCTAACGATGACGATGAGAGTGAAGATGGCGTTTCAAAGGGATATAATTGTTGTTTGTGCAATAAGAGCTTCGATAGAAAGTTCAAAATGTTTGATCACCAAAGAAAGGATCATCCGTGGGATGAATTGCCATTTGAGTGTACGTATTGTGGGGCAAAGTTCGTCTCTGAGTCGCTTCATAATTTGCATTTACAAAACCAATGTGAAAATATCAATAAGCAATTCAAGTGCAAAAGTTGTCCACTCAAATTCACTTGGAAAGAGAACTTAAAGTCGCACGAAAGATATAACCATTATAAAAACCCAATTATGCAGCAAAAATACGATTGTCAATCGTGCGATAAGAGTTTCCTCTGGCAAAAGGATTTGATGAGGCACAAAAAAAGCCATCAAACCGAAGAGGAGAAGTTCGAATCACGCCCGAACGGCATTAAAGTGGCCAAATGCAAGCATTGCGATCAAAAGTATTCCACAGTGTTTCAGTTGCGTGAGCATATTCAGAGTACACATTTGCAATACCAAATGGTAAATACTGCGCCGAACCCCGCCAGCTATTCGATCACTAATGCACTGGGCTATGAAATGGATATTGACGATTCGGAAACAGAGAGAGAAGAGCAAACAGAAAAGTATACCTGTGATCTTTGTCAAGTGCGTTTTATGCGTCGCTTCAAACTCTTACAGCATCAGCAATCATGCCATTATTCCGACGACATACCTCACAAATGCAGCCATTGCAATTTCAAATGCGTTTCGGAGTCGATATTGAGTTATCATATGCGAACGCAATGTTTGaacgaaataaaacagttccgCTGCAGTAAGTGCACAATGCGGTTTATGTGGCAAGAGAATGTAGAAAACCATGAGAGCCTAATTCACGACAGTCCCCGAAACTACACATGTGAGAATTGCAAGAGAGACTTTGCCACTCAGCACGATCTCCAAAGCCACAGCGGTTGCAAGCCACCTATAGAAgtcaaacttttcaaatgtgATTTTTGTGATCGCAAGTATAACAGAAAAGACCGCCTTATGAAACACATGAAGGTGCATAGCGCTGAGTCCAAGGAACAGCGTCTTAAAATGACTCAGACTTCCGGCAAAAAGTTTTTGTGTGCATTTTGTGGTAAGGAAGTGTCGAGCTCGTCAAATTTAGTGATACATATGCGACGGCATACCGGCGAAAAACCATTCAAATGTGAGTTTTGTAACAAAGGTTTCCCGCGATCATCTGATTTGAGCTGTCACCGTCGGACGCATACTGGGGAGAGACCACATAAATGCACTGAATGTGATAAGGCGTTTTCACGCTCATACAAACTGCAGACTCATATGCGAATTCATTCAGGAGAAAGACCCTACAAGTGTACATATTGCGATAAAACGTTCACACAATCCAATGACTTGACGCTACACGTACGAAGGCATACTGGGGAAAGGCCATATATATGCGAGACGTGCGGCGAAAGGTTTATACAGGGAACGGCTCTAAGGAATCATCGTCGAATGCGTGGACATTATGAAACTTAA
Protein Sequence
MNTRSQTKEKLSSTDRFECDSCGKTFAWKKDLHRHERYHQPNTKKFSCPHCERRFIRKDKLSSHLLVHMTGIAKSNFLKKVQNFAHNLFTDKKFKEIKCMLCNYTAPNVPELRQHLSLHNNMELTDVFLSKSEVVKRFYPEKNGPEIVQLIASQISNNQFGKFYSITNVHNYEMGISDSDETDPEEKSPYVCELCDRAFNRKYKLMNHHADEHTFDECPYKCEKCKLKFTCQRVLNNHLRHHCENPDRELQCKKCPGRFTWPKNFENHTCSKKKSPIAETFYCEVCEMEFNCPKDLRKHKKCHIPDGKSRDCNVCGEKFLRLENLRSHLKMHLKKNHKHLLLKNKFVCMLCQKEFPTIHSLKCHLRTHSDGQTDVDFKNCGFVSNFFPDEIEPKVAERIRSCFEEQKLWRLYMAVNKLGIELVLSDSDSDDGHRSTEAYICELCDLKCSRMQAILEHQYVEHDSKDVSFPHKCSVCDEQFVCAALLRRHTKNECMNSDRVHACTKCNIKFTWRQNLLAHKCLRTEKGAGDKKCEVCGKKFVWLKDLHRHKRSHIDEKKFECLVCERKFNRKDNMRAHMKVHTVECKVRGRQALKWDQQDQNMCRPHGDKVIQCKICMSKHGSIRDLSSHLLSHNNLRTTFKENEAEFLELSMRLYNNPMNRDDLAEAITKDLANSKNDRFYSITNEVGYELNLADSETCSDLDANDDDESEDGVSKGYNCCLCNKSFDRKFKMFDHQRKDHPWDELPFECTYCGAKFVSESLHNLHLQNQCENINKQFKCKSCPLKFTWKENLKSHERYNHYKNPIMQQKYDCQSCDKSFLWQKDLMRHKKSHQTEEEKFESRPNGIKVAKCKHCDQKYSTVFQLREHIQSTHLQYQMVNTAPNPASYSITNALGYEMDIDDSETEREEQTEKYTCDLCQVRFMRRFKLLQHQQSCHYSDDIPHKCSHCNFKCVSESILSYHMRTQCLNEIKQFRCSKCTMRFMWQENVENHESLIHDSPRNYTCENCKRDFATQHDLQSHSGCKPPIEVKLFKCDFCDRKYNRKDRLMKHMKVHSAESKEQRLKMTQTSGKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLSCHRRTHTGERPHKCTECDKAFSRSYKLQTHMRIHSGERPYKCTYCDKTFTQSNDLTLHVRRHTGERPYICETCGERFIQGTALRNHRRMRGHYET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-