Basic Information

Insect: Orthonevra nobilis
Gene Symbol: -
Assembly: GCA_963555765.1
Location: OY743224.1:60150083-60158399[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.073 8.3 7.6 0.2 1 23 122 145 122 145 0.95

2 16 0.0011 0.13 13.3 1.1 3 23 152 173 151 173 0.97

3 16 1.5e-05 0.0017 19.2 5.6 1 23 181 204 181 204 0.96

4 16 1.7e-05 0.0019 19.1 6.3 1 23 304 327 304 327 0.96

5 16 2.8e-05 0.0032 18.4 8.8 1 23 421 444 421 444 0.96

6 16 2.8e-05 0.0032 18.4 8.8 1 23 538 561 538 561 0.96

7 16 8.6e-08 9.8e-06 26.3 3.2 1 23 696 718 696 718 0.98

8 16 2e-05 0.0023 18.8 4.0 1 23 724 746 724 746 0.98

9 16 7.4e-05 0.0084 17.1 0.8 1 23 752 775 752 775 0.95

10 16 1e-05 0.0012 19.7 3.6 3 23 786 806 784 806 0.95

11 16 0.0004 0.046 14.7 0.4 2 23 812 833 811 833 0.97

12 16 5.5e-06 0.00062 20.6 2.7 1 23 839 861 839 861 0.96

13 16 1e-07 1.2e-05 26.0 1.0 1 23 867 889 867 889 0.99

14 16 1e-05 0.0012 19.8 0.6 3 23 897 917 895 917 0.96

15 16 2.8e-06 0.00032 21.5 3.6 1 23 923 945 923 945 0.99

16 16 0.00072 0.082 14.0 0.4 1 21 950 970 950 973 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.073	8.3	7.6	0.2	1	23	122	145	122	145	0.95
2	16	0.0011	0.13	13.3	1.1	3	23	152	173	151	173	0.97
3	16	1.5e-05	0.0017	19.2	5.6	1	23	181	204	181	204	0.96
4	16	1.7e-05	0.0019	19.1	6.3	1	23	304	327	304	327	0.96
5	16	2.8e-05	0.0032	18.4	8.8	1	23	421	444	421	444	0.96
6	16	2.8e-05	0.0032	18.4	8.8	1	23	538	561	538	561	0.96
7	16	8.6e-08	9.8e-06	26.3	3.2	1	23	696	718	696	718	0.98
8	16	2e-05	0.0023	18.8	4.0	1	23	724	746	724	746	0.98
9	16	7.4e-05	0.0084	17.1	0.8	1	23	752	775	752	775	0.95
10	16	1e-05	0.0012	19.7	3.6	3	23	786	806	784	806	0.95
11	16	0.0004	0.046	14.7	0.4	2	23	812	833	811	833	0.97
12	16	5.5e-06	0.00062	20.6	2.7	1	23	839	861	839	861	0.96
13	16	1e-07	1.2e-05	26.0	1.0	1	23	867	889	867	889	0.99
14	16	1e-05	0.0012	19.8	0.6	3	23	897	917	895	917	0.96
15	16	2.8e-06	0.00032	21.5	3.6	1	23	923	945	923	945	0.99
16	16	0.00072	0.082	14.0	0.4	1	21	950	970	950	973	0.90

Sequence Information

Coding Sequence: ATGAAGCAGAACATTAATGAAGTGGTGGACTTTGATATAGACAAAATATGCCGAGTGTGTTTGGAGACAACAAATTTCGATTTATCTCATCTGTTCGACGAGCAAAATGCTGTAAATGGTGTCACCATATCCGAAATGATTTCCGAGTGCACTATGTACACAGTTCGACGGCATGATGAATTTCCCCACCTCATTTGTGGTGATTGCATGGACAAAGTGCGTAATGCTTATCTTTTCAAGAAACAATTCGAAACATCCCATCGTACCCTAATTAAATTCCTAGAATCGGTCAACAAATTCGAAATAGAAGCAAAACCAAGTCTGTCCAATGATAAGTGTATTCAAACTGATGAATCCACTCTCTATCCTTGTGAGAAATGTGATGATAAGTTTCTCAACTACGCTCAGCTAAGAgcgCACAGAGTTACCGCACATCGAGGATCTGAAAACCTCTGTCggatatgttttaaaaaattcaaacgaaTAATTGATCTTAAAAATCATATAGCTACACGCCATCCAGGTTTAGGTCATACTAGTCACGAGTGTAAAGTATGCAACAAGAAATTCACACGTAAGGAACATGTGAATAGACATCTGCGAAACATTCATAAACTGGAAAATGAAGCAGAAAACGGAGTTACCAAAAATGAGGAAAGTGATTTGAGTAAAAATTATACTTTAAATGAGACTCAAATAGACTTTGGGAATATTGCACAGGCAGAGCCATGTGACGATTTATTATCAAATTACGATTCTGGAGGTTTTGAAGGACATGTTAGCTGCAACGATAATTTTGACGCAACCGATCCGATCAGTAGCGGCGAGGAAGATGAAAAACCTTTGGCTAGCCCACAGAGAATAAGTAATTCAAACGAAAGAACTAAACGCCATCCAGGTCATACTAGTCACGAgtgcaaaatatgcaaaaagaaaTTCACACAAAAGGAACATATGAATAGACATCTGCGAAACATTCATAAACTGGAACCAGAAGCAGAAAACGGAGTCATCAAAAATGAGGCAAGTGATTTGAGTAAATATTATACTTCAAATGAAACGGAAATAGACTTTAGGAATATTGCACAGGAAGAGCCATGTGATGATTCTGGAGACTTTGAAGAACGTGTTTGCTGCAACGAGAATTTTGACGCAACCGATCCGATCAGTAGCGGCGAGGAAGATGAAAAACCTTTGGCCAGCTTACAGAGAATAATTAATTCAAACGAAAGAACTAAACGCCATCCAGGTCATACTAGTCACGAGTgcaaaatgtgcaaaaagaAATTCACACATAAGGAACATCTGAATAGACATCTGCGAAACATTCATAAACTGCAACCAGAAGCAGAAAACGGAGTTATCAAAAATGAGGAAAGGGATTTGAGTAAATATTATACTTCAAATGAAATGCAAATAGACGTTGGGAATATTGCACAGGCAGAGCCATGTGATGATTCTGGAGACTTTGAAGAACGTGTTTGCTGCAACGAGAATTTTGACGCAACCGATCCGATCAGTAGCGGCGAGGAAGATGAAAAACCTTTGGCCAGCTTACAGAGAATAATTAATTCAAACGAAAGAACTAAACGCCATCCAGGTCATACTAGTCACGAGTgcaaaatgtgcaaaaagaAATTCACACATAAGGAACATCTGAATAGACATCTGCGAAACATTCATAAACTGCAACCAGAAGCAGAAAACGGAGTTATCAAAAATGAGGAAAGGGATTTGAGTAAATATTATACTTCAAATGAAATGCAAATAGACGTTGGGAATATTGCACAGGCAGAGCCATGTGATGATTCTGGAGACTTTGAAGAACGTGTTTGCTGCAACGAGAATTTTGACGCAACCGATCCGATCAGTAGCGGCGAGGAAGATGAAAAACCTTTGGCCAGCTTACAGAGAATAATTAATTCAAACGAAAGAAtttcaaatgaaatttccGTTAAGCTCGAAGAACCAGAAGAGAATGTTGACCTGAATTTACCAAAGCTCACTGAGATAAATGTACAAAGTCCTTTAGTAATCGAAGATATAAAACCATCGGAACCACCTCAGGATTCAACGAATCGAAAATACAACTGCAACGAATGTGATAAATCATTTATCAGAAATAGTCACTTGAAGCGGCATTTATTGTCGCACAGAGACGTCAAACCATTCTCATGTGAAATGTGTGAAAAGCGATTCAGCAGGACTGACCACCTTAAAATTCACCAAACTAGACATGcggaaaataaagaatttcaatgCGATGAATGTGGACGATCCTACTACGGTGCTGAGCTTTTGAAGAGACACAAACAGCAGAAGCATGgtgaaaacatttcaaaccaAGCCCATTTATGTGGACTATGCAACAGATCATTTAGCAGCAAAAATTACCTTCAAAAGCACATGCGTCTGCACAGTGAGGGAGGTTGGAAATGCAAATTATGTCCCGTTCAATTTGAATCCAAAGATTCCCTAAAGGAGCATGCCAAATCGCACAGCAAAGAGAAATCGTTTCTTTGTTCCGAATGCGGTCAGTGTTTTATGCGAAAGGATTATCTTTTGGTTCATATGCGAAGACATAAAGGTGAAAAACCGTACAAATGCAAATACTGCGATAAGGCCTTCCCTCGTGCTACAGATTTGAATGTCCATCAAAGATATCATACAGGGGAGAAGACACATCTATGTACGATTTGCGGCAAAGGTTTTCAGCGCGGGTACAACTTGGTAGTACATATGCGAGTCCATACTGGCGAGAGACCGTACAAATGTCAACAATGTTCAAAGAGTTTTGCTCAGTGTAACGACTTGAAGGCGCACATAAGGCGACACACTGGAGAGCGTTTCAAATGTGAGCTATGcgatattgattttataaaagcaTATAACTTGACGCAGCATAAATTTGCCGTTCACGGAATCGAAGTGGAGTCACGAATTCGACGAGTAGCTAAAATCTTAAACGAGGCAATCGAGGACGGATCACTTTCTCAAGCTGATGATGTGAAGGAGCCATTCAGGCTGGAATTCAAATTGGAACAAACGTGA
Protein Sequence: MKQNINEVVDFDIDKICRVCLETTNFDLSHLFDEQNAVNGVTISEMISECTMYTVRRHDEFPHLICGDCMDKVRNAYLFKKQFETSHRTLIKFLESVNKFEIEAKPSLSNDKCIQTDESTLYPCEKCDDKFLNYAQLRAHRVTAHRGSENLCRICFKKFKRIIDLKNHIATRHPGLGHTSHECKVCNKKFTRKEHVNRHLRNIHKLENEAENGVTKNEESDLSKNYTLNETQIDFGNIAQAEPCDDLLSNYDSGGFEGHVSCNDNFDATDPISSGEEDEKPLASPQRISNSNERTKRHPGHTSHECKICKKKFTQKEHMNRHLRNIHKLEPEAENGVIKNEASDLSKYYTSNETEIDFRNIAQEEPCDDSGDFEERVCCNENFDATDPISSGEEDEKPLASLQRIINSNERTKRHPGHTSHECKMCKKKFTHKEHLNRHLRNIHKLQPEAENGVIKNEERDLSKYYTSNEMQIDVGNIAQAEPCDDSGDFEERVCCNENFDATDPISSGEEDEKPLASLQRIINSNERTKRHPGHTSHECKMCKKKFTHKEHLNRHLRNIHKLQPEAENGVIKNEERDLSKYYTSNEMQIDVGNIAQAEPCDDSGDFEERVCCNENFDATDPISSGEEDEKPLASLQRIINSNERISNEISVKLEEPEENVDLNLPKLTEINVQSPLVIEDIKPSEPPQDSTNRKYNCNECDKSFIRNSHLKRHLLSHRDVKPFSCEMCEKRFSRTDHLKIHQTRHAENKEFQCDECGRSYYGAELLKRHKQQKHGENISNQAHLCGLCNRSFSSKNYLQKHMRLHSEGGWKCKLCPVQFESKDSLKEHAKSHSKEKSFLCSECGQCFMRKDYLLVHMRRHKGEKPYKCKYCDKAFPRATDLNVHQRYHTGEKTHLCTICGKGFQRGYNLVVHMRVHTGERPYKCQQCSKSFAQCNDLKAHIRRHTGERFKCELCDIDFIKAYNLTQHKFAVHGIEVESRIRRVAKILNEAIEDGSLSQADDVKEPFRLEFKLEQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -