Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_963555765.1
Location
OY743227.1:63560756-63564324[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.1 1.8e+02 2.9 0.1 11 46 220 261 218 261 0.79
2 6 1.2e-11 2.1e-08 34.7 0.1 1 44 267 311 267 313 0.94
3 6 8.7e-13 1.6e-09 38.3 0.1 2 42 323 367 322 369 0.92
4 6 2e-10 3.5e-07 30.8 0.0 1 44 377 421 377 423 0.90
5 6 7.1e-15 1.3e-11 45.0 0.2 3 42 431 471 429 474 0.95
6 6 0.082 1.5e+02 3.2 0.0 18 39 556 581 555 584 0.80

Sequence Information

Coding Sequence
ATGgacaatttcgaaaatgaaacaaaatataaaatatgcgAAGAAAGTGAGTGCGCGGCATCCGGTAGCGATGGATGTGCAAGTAATGCCGACGAAGATAGAGAAGACGATGAAGAAGGAGGAAACAATTCTGACCAGTCGGAAAACTTCTTTTTGGATGCAGTCGACTTCGATCACATGTATGAAGCAGTGAAGCTCTTGGAAAACAATGCCGAAGTTAACACAGAAAACGCACTTGTTTTCAATCGCAATTTGCAGGATATGCTTGAATCACTGCGCGATAAAGTGATGGCAATGCTCAGCAAATGTCGCACTCAATACATGGAAAACGAGGCAAAACTTTTAAATCCCGATCCTATGATGTCGTCGTTGAAAGGTATCGGCAATTGTGGTTCACCCTTTTTCAAAGACCCTTGTGGACGACCTTGTCCGCCGAATGCTGACTACATACATCGTAGCGAAGTTGAGAAAGAACTATTTCCAAGCGACTTGGAATTGTTTCCACACTTTATATGGACAGCAACGGATAAACTGGGACTGCTGCAAGGTGTCAAAGAACAGGCCATAGAGTATATCGAACGCAAGGAATCTTACCCATCGACGAGTTCATGTACCAAATCATCTCAAATAAGCAAGAACGTGAAACTGCACTCGCTTAAGCTCTTGGAAGTACTGAAAAAAGTGGACGATGATTTCTCAATAGATTGGAATCAAATATCTGTTTATAATCTAAAGGCTCGTCACACGGAAAACAGTTGTTATGCAATGTGGAATGTTTATTTGCGACCAGAGATAAATCGTGACGAATGGACGCAAGAAGAGAACaacaaactaaatttgttggcgaaaaagtacaaatttcaaaactggGCAGCTATTGCTTCGGAAATGAAAGGTCGATCCGATTACCAGTGTTTTGTTCAGTATCAGACAGTGGTTTCTATAAGAATGCGCGAGGACAAGGGCGAACGCTGGACAAAGGAAGAGGATGCACTTCTGTTGAAGTTGGTAGAAATGAATAGAATGGGTAATGTGATACGCTGGAACCCAATTTGCTCACAATTTCCCAATAGAACGAAAAAGCAATGCTTCGGTCGCTATAAATACAGCATCAACCCAAATATATCAAGAGTTCCATTTACACCAGAAGAGGACTGCGTGATTCTGGCCGCTGTCGAGGAATACGGTGAAAACTTCCACTATTTCCCTAAGGCGCTCTTCCCCAATCGAACCATAGTGCAAATTCGTAACAGATATTACAATTCCATCAAAGTTCGCGAGAAATCTCGCAGCTGGACACCAGAAGATGATAAGATTCTCCTCCAACTCGTAGCCAAGTATGGCTGTCAAGAGTGGAAGAAAATCGCAGAAGAGATAGAACGTCATTCCCGCACCAGCTGTCGGACACGATTTATCGTCATCTCGAAGTTTCTCAAAGAGAATCCCCTTGCCAGCATTGAAGATCTGCCAAGAAAAAACCGTGGTCCTACCTCAACAGTGACAAAAGGCAATTGGATGAAGAAAATCGCCGAAATCAAGCGCAGCCCAAATGTAAATGGGACCGAACACACACCCTTaaggaaagaaaagaaggaaCTGTATCGTTTGAAACTGCGGAACAACGAATTAAAGTGGtacaattatttaaagttttcataCGACTTTAAATTCGGTActtgttttaacaaaatttcgaCTCATCTAAAAGGTCTGGAGTTTATGCGATGTGCCTTGGATGTACAGCTGCAGTTGCCTATCATTTTGAGTAAACCGTATTCCACTGGAGCAGTACAGGTGACGTTGCAAAAACTTATGCGACTGCATGCAGAAGAGAGCAAGTCATTAGTCATTACACTGCCCCCGGTTGGGTATTGTCTTCCACCTAGCTTTTGTACTTTGCTTGCCTTCCGGGGTCTTTGCATACAATCTTCTAATATAGAAGAACGCGATGCAGCTGTTGTGAAGGAATCAAGCGCTGCCACTGAGGCTAAAAGAAAGTTTCGCGACCGATTTGTTACTCTGTTTTATAAGACTGCCCTTATAAGCCGGCTTAGGCCTGAGAATGTGGTAGAGGATTCCACATTTTACGTCAATTTCGATCCAGGCACGCAGCTAGGGCGAATATGCTGCCTTAATATGGCAGAAATAAAGGTCGCCCAAACGAATGAAATCGCTAAAAACATTGCCATTACCATGCAGAACGCGAAAAGAAAGTCTAGTGTAGATTCCAGTGTCTCATCAATGTCAcagcaagaaacaaaaaaacaaaaacactcgtCGAAATAA
Protein Sequence
MDNFENETKYKICEESECAASGSDGCASNADEDREDDEEGGNNSDQSENFFLDAVDFDHMYEAVKLLENNAEVNTENALVFNRNLQDMLESLRDKVMAMLSKCRTQYMENEAKLLNPDPMMSSLKGIGNCGSPFFKDPCGRPCPPNADYIHRSEVEKELFPSDLELFPHFIWTATDKLGLLQGVKEQAIEYIERKESYPSTSSCTKSSQISKNVKLHSLKLLEVLKKVDDDFSIDWNQISVYNLKARHTENSCYAMWNVYLRPEINRDEWTQEENNKLNLLAKKYKFQNWAAIASEMKGRSDYQCFVQYQTVVSIRMREDKGERWTKEEDALLLKLVEMNRMGNVIRWNPICSQFPNRTKKQCFGRYKYSINPNISRVPFTPEEDCVILAAVEEYGENFHYFPKALFPNRTIVQIRNRYYNSIKVREKSRSWTPEDDKILLQLVAKYGCQEWKKIAEEIERHSRTSCRTRFIVISKFLKENPLASIEDLPRKNRGPTSTVTKGNWMKKIAEIKRSPNVNGTEHTPLRKEKKELYRLKLRNNELKWYNYLKFSYDFKFGTCFNKISTHLKGLEFMRCALDVQLQLPIILSKPYSTGAVQVTLQKLMRLHAEESKSLVITLPPVGYCLPPSFCTLLAFRGLCIQSSNIEERDAAVVKESSAATEAKRKFRDRFVTLFYKTALISRLRPENVVEDSTFYVNFDPGTQLGRICCLNMAEIKVAQTNEIAKNIAITMQNAKRKSSVDSSVSSMSQQETKKQKHSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-