Onob017751.1
Basic Information
- Insect
- Orthonevra nobilis
- Gene Symbol
- -
- Assembly
- GCA_963555765.1
- Location
- OY743226.1:62945654-62946066[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-08 8.9e-05 22.7 0.0 1 40 14 52 14 54 0.94 2 2 1.1 1e+03 0.1 0.0 3 11 54 62 52 65 0.85
Sequence Information
- Coding Sequence
- ATGCCTAACCCCAATAAaggaaagtatgaaaaaaaatattcagaagaTGACTTGGTGAAAGCTGTAAATGCTGTTAAGAATGTAATGCCCAAGAAAGAGGCGGCTAGAGTCTTCAAAGTGCCAAGAACCAGCATTCAGTCGAGATTGAACGGTAGAAAGGACGACATTCAAGCAGCTGTAAAGGCATTCCTTGATACATCCAACAGAAAGGTCCCctttattgacaataaaccaGGTAACACATGGTATAAAGCCTTTCTAAAAACACATCCCGAGATCGTTGCAAGGACTCCGGAGGCAGTAACAGACGCCAGCGCCAATGTTTCAGAAATAGACATTGAGTTGgtttacttaaattaa
- Protein Sequence
- MPNPNKGKYEKKYSEDDLVKAVNAVKNVMPKKEAARVFKVPRTSIQSRLNGRKDDIQAAVKAFLDTSNRKVPFIDNKPGNTWYKAFLKTHPEIVARTPEAVTDASANVSEIDIELVYLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01522493;
- 90% Identity
- -
- 80% Identity
- -