Onob005742.1
Basic Information
- Insect
- Orthonevra nobilis
- Gene Symbol
- bab2
- Assembly
- GCA_963555765.1
- Location
- OY743224.1:122772244-122774742[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-13 6.7e-10 39.1 0.0 4 45 390 431 387 431 0.92 2 2 0.084 80 3.6 1.1 4 20 519 534 518 534 0.93
Sequence Information
- Coding Sequence
- ATGGGTGGCCCAACCACAACAGAAGGGCAAACCTATTGCCTAAGATGGAACAATCACAAGTCGAATCTCGTGGAGATCCTCGATGCCCTCATCAAAGTCGAAAGTTATGTCGATTGCACCATTGTCGTTGACGACCAAGTGCAATTCAAGGCGCATCGTGTCGTATTAGCCGCGAATTCCCCATATTTCCAATCGATCCTTCAGGATGTGCCCATGGATCATTGTAGCATTCTGTTTCCCGGTGTCCAAGCGTTCGAAATGCGTGCACTCTTGGAATACATGTACACTGGCGAGGTGAATGTCACACAGAGTCAAATTCCGAAAATCATGCGAATAGCTGAGCAATTGGAAGTGAAGGGACTCTTCGATATGGCAGACTTGAAGgagaaattcaataaattcgaAGAAAGTTGCAGTAGTCCGTATGCTGCGTCAGCAGCTGCTGCAGCCGCCGCCGCTGCATCTTCATCGTCATCGATGTTCCACCAACCAATTGAGGCACGCTCAGCGAACTTCAAAGTGAATAGCGAAGCGTTGAACTCATCTCCAGTCATAACAACATCGACAAATATAAGTCCCTCGGCGGCACCAACAAGTAGCTCATCACCTCCGTACTCGTATAAATCGCCCTAcacgaatttgtattcaaagaGTCCCCAGCCCGGTCCATCTGCCATGGATCGCCATTCACCATGGCCCATTTCACCGGGTATGCCCAATTCGATACCTGCCAATGCTGCCGCAATGCTGAGCTCTGTATATGAAGCCGCACCCGATATGAATCCTCTGAAGCGCAAGAAGCTCTCATCGATCTCAAGTATGCTCATGAATCGCGACACGCCGATCTTACGCAACGTTCTGGCTCAAACTCACACCGCAGATTCGTCACAACCTATGCCGTTGGTTTGTCAATCGGTGAAGCCGGAGAAGGTTCAGAAATCTCCACAAATTAGCGGTACTGGAATCAACAGCTGCAATGGATCCGACTACAGTCAGGATAAAAAACCTAAATTCGAAGAACTCCATTCTCCGTACACCGATCGGTCCTTTGAAGATGACGGATTGGACGGTCAGCAATCGTTTACGGGTGAGAATCGTATGAACTCCTTCGGCTCTCAACAGCAACAGAAGCCGGAGTGGAAACGTTACAAGCAATACACCCGCAGTGACATTCTTCAAGCCATTGAATGCGTACGCAATGGTATGAGTGCCTTGCAAGCATCCCGCAAATATGGTGTTCCCTCACGTACACTGTATGACAAAGTGAAGAAACTTGGCATCACTACCGGCCGTCCTATTAATCGAACCCTAAAACGCAGTCCAAGCAGTGGCGGTGGCAATAGTGCTGCTTTCCCGTATGGCCACGGATACGGTCAATCCGAACCTCTGCTCTCGTCCATGCATGATGGTAGTGATCGCGAAAAAGATCACGAGCGTCATCTTCCGCCAACAATTCCGCACCCGGCTGCCGCCCTATTAGATCCTGCGTTCCTGCAACAGGCATTTGAGAGCCGGGGAGGTGACATCGCTGGGCGGGAGGCTCTTCACGCAATGGCGCTGGCTGCGGCGGCTCATGCAGCCGTAAACGGTATGTCCACGAGTCCTGGAACTAATGGCACCGCACGCTCGCCCAGCCCCAGTTTTGCGATGAAATATGCCCGATCACAGAGTCCCACCGCCCATCAGTATCGCGAAAGAGAGCTGATGATGGAGCGCGAAAAAGAACGCGAACACGACATTGAGTGTGAACGTGAACATGAGCGTGAACGTGAGCGAGAGCGAGAGCGAGAACGTGAAAGAGAAAGAGAACACGACCGATCGCGCGAACGAGAACGCGAACGCGAACGAGAACGAGAACGCGAACACGAACGCCGAATATTGGACCGTGAAATGCTGGAAAAGGAGCGTTATCAACGTGACATCGAAATGAACCGCGAAAGAGAACTATCGGAACTCCATCACGAGAATCGCGATGAAGAGGACGATCATGTTGAGGATTTGTCAGTGACGCGTAAGGACAGCATATCACCGAATGCAAACAGCCATCACGGCGTTATTGTCCCACCGATGAGTACAAAACTTCCTCTGAACAGTAACGACAGCTTTCAAATCTGCGAAAGCATAAAACGCGAGATCCTCAGTGAGGATCACGATTAA
- Protein Sequence
- MGGPTTTEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEQLEVKGLFDMADLKEKFNKFEESCSSPYAASAAAAAAAAASSSSSMFHQPIEARSANFKVNSEALNSSPVITTSTNISPSAAPTSSSSPPYSYKSPYTNLYSKSPQPGPSAMDRHSPWPISPGMPNSIPANAAAMLSSVYEAAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQTHTADSSQPMPLVCQSVKPEKVQKSPQISGTGINSCNGSDYSQDKKPKFEELHSPYTDRSFEDDGLDGQQSFTGENRMNSFGSQQQQKPEWKRYKQYTRSDILQAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPINRTLKRSPSSGGGNSAAFPYGHGYGQSEPLLSSMHDGSDREKDHERHLPPTIPHPAAALLDPAFLQQAFESRGGDIAGREALHAMALAAAAHAAVNGMSTSPGTNGTARSPSPSFAMKYARSQSPTAHQYRERELMMEREKEREHDIECEREHEREREREREREREREREHDRSREREREREREREREHERRILDREMLEKERYQRDIEMNRERELSELHHENRDEEDDHVEDLSVTRKDSISPNANSHHGVIVPPMSTKLPLNSNDSFQICESIKREILSEDHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241576;
- 90% Identity
- iTF_01116543;
- 80% Identity
- iTF_01116543;