Basic Information

Gene Symbol
Mblk-1_1
Assembly
GCA_963555765.1
Location
OY743225.1:37136073-37159696[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-14 8.3e-11 42.0 0.1 1 44 317 361 317 362 0.92
2 2 2.7e-18 2.6e-15 56.4 0.0 1 43 812 855 812 857 0.95

Sequence Information

Coding Sequence
ATGGGACGCAGGAAATGGAAGCAATATCAGGAAGCTCTAACGCGATCCCAATTAAGTGCAGATATCTCAAATCTAGATCAAAACgatatttcaagACAAAAACACGAGCAAAAACTGGAGAAGGCCAAGGAAAATtcacatcagcagcagcagcaccaaccgTTCGAAAACGacgtttcaaaaatcaaaaccgaAGTATTCGACACAAGCGAAAGAACTTTGAATTCGCCGCacataaaaaaagaaaacttCAAAAGTGATTCAGAAGTAACGGGGGAAAGTGTAAAGCTTAATAACAATACAACATcacatatatataataataatagtaaaaagaATAACGAGGAGTTGCTGCCACCCACCAGTCCGACACCGCCGCCACCAATACCAATCGATTGGATACCGAATGAGAAGTGTAATTTTTGTATTGACGGTAAACTCCTCACAGTGAACGAGAAGGGTGAATTAGTGGCCGAGTCGAGCCCGGCTTTGTCCGAGGCAGATCTCGCCAATAGAcgaCCAGGAGATACGGATAGTGACTCTAGCGATAGTCTGGTGCCGAATAATAGGGTCAATGCAAATACAATACTAACATCACGTCTAATAGATCCAGTTCCATCGAACATGACCTCATTAGAGTCAATGGCAGCACAGTGGAATGCAATTCAATCGATACCGGGACTACCATCAGGCTTAGGGCAATTGTATCCAAGTATATTGTACAATTTAACTCAGCATGTGAACTCGGCCACACCAACTACCTCAGAGACATCGGCCGCCGCTATTAGTCCCTCACTCAAGGATTCTCCCAGTCCCAGTGATTTAACGGGTGAACAGCCATTAGATCTTAGTTCAAAACCATCACCAAATTCTTCAATCGGTGGAGATGCCAGGCATATGCatcgagcGAAACCTCGGGTGACACCCTGTACCGGTCGTCGCACTTATACCAATGAAGAACTCAATAGTGCACTGCAGGACATCATAAGTGGTCGATTGGGCACAAGACGCGCTGCAGTACAATACAACATTCCACGTTCGACATTGCGTAACAAGGTGTACAAAATTTCATCTGGCGCAAAGCGCGAAACACCAACATCGTTGCGCCATTTGACTAGTCTCGAGGACCTAGCCGATGTCGACGATGATAAACAAGATCTATCAGCCGATGAGGAAGACAGCAGTGGTGATAAGATACTTAGTAGTTCCTTAGCGTCACACGGAGGCGATGATCTTGCCAGTCGTTTTGCTGATGCAAATCTCGCGGCGAGTATCCAAAAGATTTGTGTCGAACAAAATAGCCTAACAACGTCTCAGCAGCAATCACATCACCAGGCGCGTAGTGATATTCAGTTACACAGTAAACCGTCAACATCACTTGAACTACAGCCGAAGCGTAAAGTCTCAACACCACAACCTCCGCCACCACAAACATCACCATCACAGAATGCGTGGCAGAATGTCTTACTGCATAGTTTGCTTCTATCCGGGGGTCTTCCCATACaccaaaatattgaagaaactttacaatttttcaatgctCTTTTGTTGAAGCAGGATGCAGGCTTGATTAATCCCCAACTGCTGATGCAACTGCAGCAGGCGAGGCAATCGCCGCAATCAGGACAGCAACAGCAACCACATCATCTGCACCCGAATGCAGCAGGACATCCAACAGCTGCAGCAACCGTTGCTGCATCCTTTCAAAATCGTCAACCAAAGTCTGAAACACCAGAAACCGCATCTTCAGTGGACCTGAACGAAGCGCTGGCTGATGATCCatcagttattttaaaaattccgtCCTACAAACCGGTAGCTGGATCCTCAACTTCATCGACATcctcagcagcagcagcagcggcagcagTTGCGGCAGTGGCGTTATGCAACAACAAGAACGGTGAAAATCTGTCATCGACGTCGCCGAAAATTTCGACGCCGTCAAGCCTGATGGGTGCCAATTCACTGACGCAACAGCTGCATCACCATCACCAATTGCATCAGCATCACAATCCTTCAGCGACAACAGCCAATAACATCGCAGGCATATCGCCTTCCTCAATACGTCACACCAGTGGCGAATCACAGTCACCGCCAAGTCTTTCCCTGCGTGAAGTCATCGCCAACAGTATCAGTCGAACATTTAGTCAGCAAGCAAACAAGGAAGCCAGCAGCTCGAGTCCCGCTCACTCGGCGTCATCGGCAATGGATCACAATGAGCAGTACAAACGGCCCAGCATATCAGTGATTAAAAACATAGGCGGAACGGACACCTCACGCTTCGCCACCGCTCCAAATCTCCTGGGCGGTCATCACAACTCCAATCACCATCAGCATCACCACCATCAGCACCATAGCCAAAATGTGGCAAATAATAATTTGGCCGGTGGCAAGGGAACACGACCGAAGCGTGGCAAATATCGAAACTATGATCGTGATAGTCTGGTCGAGGCTGTTAAGGCAGTACAACGTGGTGAAATGTCAGTGCATCGTGCTGGTAGTTACTATGGCGTGCCTCATTCGACGCTCGAATACAAGGTGAAAGAGCGCCACCTGATGCGACCACGAAAGCGTGAACCCAAACCGCAGCCGCCTCTTGACGACCGGACGGGAGGCAGCACGTCGGGCACCAATTCCGCGGGATCCGCCTcgaacacaacaaaaaactcAAACATTCCAGGTCTATCGGCTGTAAATAGTTTAGATAAATTGAGTAAAAGCGGCAGTGGTGTCGCCGGACCCAGTGTCAATCAAAAAACTTCAGCCGCCGGCAAAAGTAACCCACCATTCCCTACGACATCACCAAATGGCATGAAAATGCCTGTTTTCGATCAAGGTCTAGCTCAGCTTCAGTATCCAACGCACCTTTTCTGGCCAGGTCCATACGGTCCACTTCAAATGCTGCAGCAAAATGCAGCTGTTGCAGCTGCTGCGGCGAGTGGTGGTCCTGGGAATTCTTCATTCGCAGCCAATGccaatgatttatttaaatcccAAATGATCCAGAGATTTCATGAAGAACGAGGTCCACCCAACTCAATCGGCAGTCCTCCAGCGGCAGCAAGTCTAAACAACCCCTCGACCAATGTCAGCACTAACAATAACAACAGCAAAAGTGTACGCGACATCCCTGAGAATCTCTACGATACCAGCGGCGCAAATGGCTCCTTCTTAGATGGCATCATACGCAAGACTTTAGACCGCAAGAGTTCCGATTTAACACAGGGCGCATTATTAGACCAACTGGTTAAAAATAGCAAACCTCCACCTCCTCGTCTAATGATCAATAATGAACGTACGACGGGTGACATGTTTAATCTGAAACGACCCGCAAGTCCCATGGCCTATCATCCAGCGATGGAGATAAAACGTGAGCGTGCCAGTCCAACATCGGATTCCTCGATGAGCGATTCAGAGCAAAACCATCGACGGGACACAGATTCAGAACCATTACCACCATCGGCATCACAGCACCATGCGGGTGGATTGCATCACTCCCTCCTATGTACGAGTAGTGATTTAAATGGCGCCCAACACGGACCCACGAGTTCCGAAAATAACGTGCTAGCGTCTCAATTTAAGGGGACAACCACTAGCTTACACGAGACACTGGGACAAATCAAGTCCGAAACAGAGGATAGTTTATAG
Protein Sequence
MGRRKWKQYQEALTRSQLSADISNLDQNDISRQKHEQKLEKAKENSHQQQQHQPFENDVSKIKTEVFDTSERTLNSPHIKKENFKSDSEVTGESVKLNNNTTSHIYNNNSKKNNEELLPPTSPTPPPPIPIDWIPNEKCNFCIDGKLLTVNEKGELVAESSPALSEADLANRRPGDTDSDSSDSLVPNNRVNANTILTSRLIDPVPSNMTSLESMAAQWNAIQSIPGLPSGLGQLYPSILYNLTQHVNSATPTTSETSAAAISPSLKDSPSPSDLTGEQPLDLSSKPSPNSSIGGDARHMHRAKPRVTPCTGRRTYTNEELNSALQDIISGRLGTRRAAVQYNIPRSTLRNKVYKISSGAKRETPTSLRHLTSLEDLADVDDDKQDLSADEEDSSGDKILSSSLASHGGDDLASRFADANLAASIQKICVEQNSLTTSQQQSHHQARSDIQLHSKPSTSLELQPKRKVSTPQPPPPQTSPSQNAWQNVLLHSLLLSGGLPIHQNIEETLQFFNALLLKQDAGLINPQLLMQLQQARQSPQSGQQQQPHHLHPNAAGHPTAAATVAASFQNRQPKSETPETASSVDLNEALADDPSVILKIPSYKPVAGSSTSSTSSAAAAAAAVAAVALCNNKNGENLSSTSPKISTPSSLMGANSLTQQLHHHHQLHQHHNPSATTANNIAGISPSSIRHTSGESQSPPSLSLREVIANSISRTFSQQANKEASSSSPAHSASSAMDHNEQYKRPSISVIKNIGGTDTSRFATAPNLLGGHHNSNHHQHHHHQHHSQNVANNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPLDDRTGGSTSGTNSAGSASNTTKNSNIPGLSAVNSLDKLSKSGSGVAGPSVNQKTSAAGKSNPPFPTTSPNGMKMPVFDQGLAQLQYPTHLFWPGPYGPLQMLQQNAAVAAAAASGGPGNSSFAANANDLFKSQMIQRFHEERGPPNSIGSPPAAASLNNPSTNVSTNNNNSKSVRDIPENLYDTSGANGSFLDGIIRKTLDRKSSDLTQGALLDQLVKNSKPPPPRLMINNERTTGDMFNLKRPASPMAYHPAMEIKRERASPTSDSSMSDSEQNHRRDTDSEPLPPSASQHHAGGLHHSLLCTSSDLNGAQHGPTSSENNVLASQFKGTTTSLHETLGQIKSETEDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223304;
90% Identity
-
80% Identity
-