Basic Information

Gene Symbol
ct
Assembly
GCA_963555765.1
Location
OY743224.1:88013098-88048128[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-26 1.7e-22 79.7 0.0 3 71 778 847 776 853 0.94
2 3 5.1e-32 6.9e-28 97.0 0.0 3 77 1202 1277 1200 1279 0.96
3 3 6.8e-31 9.2e-27 93.4 0.0 3 77 1415 1490 1413 1492 0.96

Sequence Information

Coding Sequence
ATGTCCTGTATGGCATATGAGGAGCAAAGGGCAACTTTGGCTGAAAAGGAAGTAAATACTTTGAAGGAACAATTGCTGACAGTTTCAACTGCAtcaacaactacaacaacgtCTTCGACGACAACAACTACTGCATCTTTGATACATTCGTCGCCGTCATCACCGTCATTGGTGGGCACAACTACAATTCCAAATATAAAATTGCCCCCAACGATAAATAACAATATTAGtttcaataataacaacaacaataataataataataatagtagtaACAAGTTAAATAGTGTTGCCATATCACAGCATTTGCATCAAAACGGAAATTTGTTGGCGGCAACACCGTCACCGTCGCCACCATTATCCGAGAACGGAAGCGCACTAAACGGTTGCCTTAATCCGGCAAAGTTGCTCTTCAATCATAATCAAATGATGGAAACAACTGCATCGAGCACATCGACCGATATATCCGCGGCGTTagttacaacaacaacaaacacaacaaCCGCGACTACGCATATGAATAGCGCACCAGACGCAAGTAAGCTTATAACTGCAATGACTGCCGAAATGAATCTCCACCAAGACTCCAGCGATTCAGCAACACTTGCGAGCAATCAAATATCAAACCGACACAGTCCGCTCATGTTATCATCAGTTGAGACCAGTGGAAACACAGAGGCAACAcgaaacaataataacaataataatagtaCTAGTAACAATAATAAGAATACAGATAGTAATAGCAGTAGTAGTTGTAACATAAATTTAGCTGATGAATTGGCTGCCAAAGAGAAAGAGatTAAAGCACTTATCGACGAGGTTAACCGACTGCAAGCCCTCCAAGAAACCCACATGGTACAAATTCAAAGACTTGAAGATAATCTTGAAGTGAAACGTCAACACATTCTTAGACTAGAGGCAAGCCTGGATAAGCAACAACTCAAATGTGATGCATCAACTGCACCCAAACCAAGTGTGGATCTGTATCGACGTGAAAAGGAAATAGCGGTTCCATCCGCCATTCCAGATCATCCGTCAGACTCATCGGAGgagcttcaaataaaaaaggaaaatcaAATATCAGCAACATCAGCAACATCACTTGGACATGATATTACAAGTCAGACGGTGGCGGCAGCTGCTGCTGCAGCGGCTGTAGCCGCCAATGACCCTAAACAATTCCAGGAACTTTTGCTGGAGAAAACAAAGGCATTGGCGGCGGCTGCTCATGCCTCAAGCGAGGCACTGAAAGCCGGCGAAGGGATAACCAGTGACACGATCTCAACGGACACCTCCAAGACTCCTGAAAATGAGTCCGCAGCCTGTGGGGTCCTTAATAGTAATTTAAACGAATCGAGCCTACAAGATCAGCAACATCAGGAATTGCGAACTTCAGCTTCGGAATCGATAGCATCTTCTACATCCGTAGAGCAGATTCCTTCGTCGAATTTCCAAAGTGTTGACCAGTTTGGTTCACTGCTCGGGGGCGAGTTGGTAAACTCATATTGGCGTCGTGGCTTTGAATTGTCAGCGGAGCTTAAGTTGCCGCCACCCCATCATCTGCCATTAGTTCCGCCACTTCCATTACCCCCGCAACAGACTTCACCAGCAATAGCCGCCGTTTCAATATCGCACACATCACCGTCAATAGCAACAACAAATCCAACATCTAAAACGCCAACAtcgctttttcaaaatttcccaTCGATGCTCTCGTGCCGATCGTCTCCACCACTCTCAATGTCGTCCACAGGGCCATCAACCACCACCCTTTTGAGTCAGCTAGTCAATTCAACATTCTCATCCCATTCAACTCCTTCTCTTCGAACAGATACTCAATCGTCGTTGTTGTCTTCATCGTCTGCGACCACGACAACGGGTGCCCATATGCAACAGTCGTCACACCATCACCTCCATcaacaccagcagcagcaacaccCTGCTCTGCAGCATCATCCgctgcagcagcaacagcatcagGACTATGAAAAGGCTAACAGCCATCACGATTCCTCATCTACGGCGAGCACGCCAAATCTTCATGATCAACGTTCCAACGATGAGCACATAAACGGAACTAAATGTGCCAAACCCCAAGAGGACAACAACAATTCGTTGGGATCGTTGGCACACTTACCACCAGCATTCCTGCCAGGCCTGCCATTCCAATTTCAAGATCGTGGCCACTTCCGTTTCGCCGAAGACATTCAATTACCTCCAGGCGCCTCCATGGCTGGCCGCCTCGGAGAATCTCTTATACCGAAAGGTGATCCCATGGAGGCCAAACTTCAAGAGATGCTACGCTACAACATGGACAAATATGCCAATCAAAGCCTGGACACATTACACATATCACGCCGAGTGCGCGAACTTCTTTCCGTGCACAACATCGGCCAGAGGCTCTTTGCCAAATATATCCTCGGATTGTCACAGGGCACTGTTTCCGAGCTCCTGTCCAAACCAAAGCCGTGGGATAAATTGACTGAAAAGGGCCGTGACAGTTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTACTTAAGTCTTTGATTCCAAAAAAGGATTCAGGCATGCCACAGTATGGTCGTAACGAGGATTCTATGTCAGATGATCGCATTGCGCATATTTTGAATGAAGCTTCAAGTCTAATGAAGACTCCGCAGGGTCCTGGCGGACCCTTACAGCAACAGATGCAGCATGAAGCCCAGCGTCAGCAACAACACCAACAGCACGCATCGTCACTTGAAGACTCGCATAGCAACGAAGACTCTAAATCGCCGCACGCGTCGTGCACTTCGCCATTCTACAAGGAGTCGCCAGtgcagcaacagcagcttcAACTGCAACAGAGACAAGAAGTACAGCGGAGAAGCATTAAACCGGATGAGATGTGTCAAGACAAAATGGCGCGAATATATCAAGAGGAGCTGGCCAAACTTATGACGCGTACCCCACGCGACACATTTCCAAGTTTTTTGTTTCCACACTTTTTCAGTGCGGCAGGTGGCCTTCCGCCAGCCGCCAACAGCGCAATACCACCCGAAGACAACATTCGTGTGGCTTTTGAAGCCTACCATCGCGAAATGGCCAAATTGCAGCAGAATAGCAGTGGCAACATACCAAACTTTCCGAATTTCTCCAGTTTAATGGCGTTGCAACAGCAGGTACTAAATGGTGCACAGGATTTATCCGTCCCGaaagaaaacgaaatgaaaGTGAACGGCCAACGCAATTCCATAGAGAACTGCGATTCAAATACAACCAAAGAAACCAACGATGACCCCGGACTACGCCATTCAAGTGCATTTAGTTTAGTTCGTAATAAACAAGAATCAACACCCATACCAAATTCTAATTCAAACACAAACACCAACTCCGCCGCGCCAAGTCCTCTCAGCAATTCCATTCTGCCACCCGCAATGACACCCACTGAAGACTTTTCAACAGCAGCCAGCCCTCTGCAGCGAATGGCATCAATCACAAACTCACTGATAACACAGCCTCCAGTGACACCCCACCATACCCAGCCACAAAGACCAACAAAGGCAGTCCTGCCACCCATCACACAACAGCAATTCGACATGTTTAACAATCTAAACACTGAAGACATTGTTCGCCGAGTGAAAGAAGCCTTGTCACAGTATTCTATAAGCCAGAGGTTGTTCGGAGAATCAGTACTGGGACTGTCGCAAGGTTCTGTATCAGACCTCTTGGCAAGGCCCAAACCGTGGCATATGCTGACACAAAAAGGCCGCGAACCTTTCATTCGTATGAAGATGTTTCTTGAGGACGAGAACGCCGTTCACAAATTAGTAGCGAGCCAGTACAAAATTGCGCCCGAAAAGCTAATGCGCACTGGAAGTTACAGTGGAAGTCCACAAATACCACAGGGTCTGGCCAATAAAATGAATAGCATTCCAATGCAGAAGATGATGAATGAGCTTAAAATGCAGGAGCCACAGGCTCAGCATATAATGCAGCAAATGCAAGCGGCGTCTGCAATGGCGGCAGCCGCCGCAGCCGGTCACATGCAGAATGCCCAACATCAGGGTATGCTGCTTACCACCCCAGGACTTCCACCACAGCATGCAATAAGCCTGCAGCAGGCAGCCAACGAAAAGAAACCAATGATGATGCCTATTCATTCTCCACACCAAGCCAATGCTATAAGGAGTAGCATGCACCAGCATATGTCTCCGACAGTGTACGAGATGGCTGCCCTGACCCAGGACCTTGACACACAGGTTATCaccacaaaaataaaggaagctCTATTGGCTAACAATATTGGGCAAAAGATTTTCGGGGAAGCAGTGCTAGGCTTATCACAAGGGTCCGTTTCAGAACTGCTTTCGAAACCAAAGCCTTGGCACATGCTCAGTATAAAAGGACGAGAACCCTTTATTAGAATGCAGCTGTGGCTTTCCGATGCGAATAACGTTGAGCGATTGCAGGTACTGAAGAACGAACGTCGTGAAGCTAGCAAACGCCGTCGATCGACAGGACCTAACCAACAGGATAATAGCTCAGACACGAGCAGTAACGACACTGCTGATTTCTATACAAGCAGCCCTGGGCCAGGTTCAGTCGGCTCTGTAGGTGCACcgccaaacaaaaaacaacgagTACTGTTCTCGGAAGAACAAAAAGAAGCACTACGTTTGGCATTCGCACTCGATCCCTATCCTAATGTAGGTACTATTGAATTTCTTGCAAACGAACTGGGTTTGGCAACGCGCACCATTACCAACTGGTTCCACAATCATCGAATGCGTCTCAAACAGCAAGTTCCTCACGGCCAACCCACAGAGCCGGTCCCCAGTCGAGAAAACACCAACGCAACACCCTTCGATCCCGTCCAATTTCGTATACTCCTTAATCAAAGACTGATGGAATTGCAAAAGGAGCGCATGGGCCTAAGTGGCGCACCGATTCCCTACCCACCGTATTTCGCTGCCAATCCCAATTTAGCGGCGCTAATTGGACGTGGCCTTCTTCCAGGTGGAGGTGAGCCTGATTTGCAAGCCCTTAACAATGCCTTCAAGGAGCAAATGAGTGGCCTTGATCTATCTTTGAAGCGAGAGCGTGACGATGATTTTGAGGACGACGGTGAAGGCGATAGTCATTTGTCTGACAATGAATCCATCAACGGTAGCGATGAAAAGTCTGAGATGAGTGAGACACCTAGGTCTTCCCTTTCTGGAGCTGGCATGCAATCGAGAACCTCTCGACGCAAACCAGCAGCTCCACAATGGGTTAATCCAGACTGGCAGGGAGATGGTAAATCTGGTCTAATACCTCCAATGCCGGCCGGTGCAACTGACAAAGAAGTCATCATTAATGGAGTCTGCGTCATGCAGCAACGAGCGGCCGACTACAGTCGCAAAACGGTGGCTGCAGATGATGACGACGAAGGAGCATCTGATGCGAATGATGACGAACCCACATCTAATCACCCTACACAATCATCCGATTGCGAAGAACCACCAGCTGATATCGATCAAAGATTCATGGAGCCCGAGGTTCGAATCAAACAAGAAGAAGACTGCGACAGCAACGATAGCCACCAAGATGATCATAACACCGATCTAAGGAAGCCAACACATCATCGCGACGAAGAGGACGACACTCCTGGTGCATGGAATTATTAA
Protein Sequence
MSCMAYEEQRATLAEKEVNTLKEQLLTVSTASTTTTTSSTTTTTASLIHSSPSSPSLVGTTTIPNIKLPPTINNNISFNNNNNNNNNNNSSNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSALNGCLNPAKLLFNHNQMMETTASSTSTDISAALVTTTTNTTTATTHMNSAPDASKLITAMTAEMNLHQDSSDSATLASNQISNRHSPLMLSSVETSGNTEATRNNNNNNNSTSNNNKNTDSNSSSSCNINLADELAAKEKEIKALIDEVNRLQALQETHMVQIQRLEDNLEVKRQHILRLEASLDKQQLKCDASTAPKPSVDLYRREKEIAVPSAIPDHPSDSSEELQIKKENQISATSATSLGHDITSQTVAAAAAAAAVAANDPKQFQELLLEKTKALAAAAHASSEALKAGEGITSDTISTDTSKTPENESAACGVLNSNLNESSLQDQQHQELRTSASESIASSTSVEQIPSSNFQSVDQFGSLLGGELVNSYWRRGFELSAELKLPPPHHLPLVPPLPLPPQQTSPAIAAVSISHTSPSIATTNPTSKTPTSLFQNFPSMLSCRSSPPLSMSSTGPSTTTLLSQLVNSTFSSHSTPSLRTDTQSSLLSSSSATTTTGAHMQQSSHHHLHQHQQQQHPALQHHPLQQQQHQDYEKANSHHDSSSTASTPNLHDQRSNDEHINGTKCAKPQEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGGPLQQQMQHEAQRQQQHQQHASSLEDSHSNEDSKSPHASCTSPFYKESPVQQQQLQLQQRQEVQRRSIKPDEMCQDKMARIYQEELAKLMTRTPRDTFPSFLFPHFFSAAGGLPPAANSAIPPEDNIRVAFEAYHREMAKLQQNSSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEMKVNGQRNSIENCDSNTTKETNDDPGLRHSSAFSLVRNKQESTPIPNSNSNTNTNSAAPSPLSNSILPPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAANEKKPMMMPIHSPHQANAIRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSEMSETPRSSLSGAGMQSRTSRRKPAAPQWVNPDWQGDGKSGLIPPMPAGATDKEVIINGVCVMQQRAADYSRKTVAADDDDEGASDANDDEPTSNHPTQSSDCEEPPADIDQRFMEPEVRIKQEEDCDSNDSHQDDHNTDLRKPTHHRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_01116341;
80% Identity
iTF_01116341;