Onob017572.1
Basic Information
- Insect
- Orthonevra nobilis
- Gene Symbol
- retn
- Assembly
- GCA_963555765.1
- Location
- OY743226.1:59635210-59679754[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.62 1.5e+03 0.2 0.0 41 65 90 114 85 125 0.81 2 2 6.2e-20 1.5e-16 61.1 0.1 15 89 218 290 186 290 0.94
Sequence Information
- Coding Sequence
- ATGTTGCTCTCCGTGCGAATGGGATATTGTCCGCTTGTTCCGATAAATTCAAACGACGAACATTCTGAGGACGACATGAGAGACTGTGAGTCAGTTGATGACGAAAACACCAGCCGATTAAACGTCTCGATGTCCAATGGAATGGGCATGGATTATGGGGGAATCGGAGGTGGCAGGAGTCCAGAACAACACAACGCAGAAATTCCAATGAGCCATCATCATGCACAGTTCGCTACGAATCACCCACTCGGAGCTCTGGGAAACTTTATGAGCATGGGCGGCCTACATAGCATCCCAAACCTGCAGCAACATAACGATGTCCTCGAGAAACTAAAAATGCAGGTCCGCGACATAAAAGCCGGTTTGATGGACCAGGAATACCCACCGCATGCAAACTTTGGCTCAAACGTCATTCCAACCCCAATCAACACAGCCTTCACAATTCCATCAACCTCTCACACCTCATTCAATCACTCTCCTCAGAATTTGTCTCAGCAATCCCCACAGCCGCAGCAAACTTTGTTATCAACGCACccacagcaacagcagcagcagcagcaacagcatcagcaacaacaacaacaatcacaaTCTAGTTCCCAATCAATGCCAAATGGTTTCTCGTTCACATCGCCCTCGGCTCCAAGCACAAAAGACGGTACGCCTATAAATCGCTTGCCGATCATGGCGAAATCAGTACTTGATCTGTACGAGCTTTACAATTTGGTTATAGCGAGAGGAGGTCTCGTTGACGTGATAAACAAGAAGCTATGGCAAGAGATCATCAAGGGGTTGCATCTTCCGTCAAGCATAACTAGCGCAGCGTTTACTTTACGCACacaGTACATGAAATATCTGTATCCGTACGAATGTGAAAAGAGGAATTTGAGTTCGCCAGCCGAACTTCAAGCTGCCATCGATGGCAATCGCCGAGAGGGACGTCGTTCCAGCTATGGTCAATTTGAAGCGATGCACAACCAGATGCAGATGccacaGATGGGAAGAAACAATCTACCCGCAGGAATGCAACAAATGTCACCACTTGCGCTAGTCACTCATGGCAACCCACAAGCAGCGGCAGCAGCCGCACATCACAGACTGATGGCACCATCATTTGCTCAGGTCCCCAATTTGGTACAACACGAGCTAGAACAACGTATGATGgaatatttcaaattgattcaAGCAAAAAAGGAACAACCCCGCCCAAGGTCCCAGAGTCCGGAGACAACCACCCGCGAAGCATTAAATGCACTCGAAATGTCGCGTGTGGCTTTGTGGTCGATgtacaacaacaacacaagTCCGCCGGCTTCCGTGAATACCTCACCACAAGGAATCGAACCCCAACGcGAGGCGCTGAACCTTTCGGACTCGCCACCTAATATGTTAATAAAACGAGAGCGAGAACGTGACCCTTCGGAGTTGAGTGTGAACTCGGATAGAGAAGACTTCAACCTACCGCCCCCAGCCAAGAGAGAATTTCCAGGTAATTTGTACATACCCTCGAATCGAAGTGGTTTTCATGAGGAACACGACGACATAGATTCCACAGCAAATACCTCAATGGAACGCGTGGAAATAAACCATCATGACTTGACTTTGAAAGCTCCCGCCAAAAGACTTAGTCAAAACTCACCAATACTATTGTCGCCTCcgaaaaatccaaaaagtttCAACGAACTTAATAGTTTGAAACCTAATAAACATCAGGATCATAAAGAGAAGGTTGCCTCTCCAATACCTTCAAATGAAGAGTTGTCGTTCCTCACAGGGATGCAGTTCAAATTGAAAAGATcgCTCGGTGGAAATGGCGAACCACAAATTGCGGTTAATCTTGAATTAAACGGAGTAAATTTCGAGGGTGTTCTTATTGCCAATCCCCCGTCGTCGTCTCCAAATAGAATGCTTACAATAAAGGCTTCGTCACCCTCACCCACAAATGTGCTTGTGTCAAACGGGCCGGCCATTTCATCAAATGGACCAACTGATGCGAAGAAAATAATAACCCCAGGCCGACAGCCCATTATTCCTCACGCAccgataaattaa
- Protein Sequence
- MLLSVRMGYCPLVPINSNDEHSEDDMRDCESVDDENTSRLNVSMSNGMGMDYGGIGGGRSPEQHNAEIPMSHHHAQFATNHPLGALGNFMSMGGLHSIPNLQQHNDVLEKLKMQVRDIKAGLMDQEYPPHANFGSNVIPTPINTAFTIPSTSHTSFNHSPQNLSQQSPQPQQTLLSTHPQQQQQQQQQHQQQQQQSQSSSQSMPNGFSFTSPSAPSTKDGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRNLSSPAELQAAIDGNRREGRRSSYGQFEAMHNQMQMPQMGRNNLPAGMQQMSPLALVTHGNPQAAAAAAHHRLMAPSFAQVPNLVQHELEQRMMEYFKLIQAKKEQPRPRSQSPETTTREALNALEMSRVALWSMYNNNTSPPASVNTSPQGIEPQREALNLSDSPPNMLIKRERERDPSELSVNSDREDFNLPPPAKREFPGNLYIPSNRSGFHEEHDDIDSTANTSMERVEINHHDLTLKAPAKRLSQNSPILLSPPKNPKSFNELNSLKPNKHQDHKEKVASPIPSNEELSFLTGMQFKLKRSLGGNGEPQIAVNLELNGVNFEGVLIANPPSSSPNRMLTIKASSPSPTNVLVSNGPAISSNGPTDAKKIITPGRQPIIPHAPIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -