Basic Information

Gene Symbol
-
Assembly
GCA_029030555.1
Location
JARDVY010000017.1:7665943-7669191[-]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-13 4.8e-09 36.7 4.3 2 29 368 395 367 395 0.98

Sequence Information

Coding Sequence
atgACAAATCTCGACGTAAGCAACAGCAGCACTGATAGCAGCTCTGGATCCACTTCGGATTCAAGTAGCAGTGGTAGTTCTTCTACTAGTTCTGGGTCTGGATCAAGTAGTTCTGACTCTGAGTCATCAACCTCTGATACTCCACCAGTAACTGCGGCAGCTGTCCCTCCAAAGTCACCAACAAAACCGACAGAGGAAGCAAACAAGAAGGAAGAACCTAAACCCCGAAGGTCCTCAAAAACTAAGACGTCATCAAGTGAAGAGGAAGCACCAAAACCAGTTAGTCCTAAAGCAGCAACGCCAAAAAGAAGAGGTTCAACAAAACCAAAATCTGCCACTTCTGTTCTTGCTAAAGGGAAGCCAGCATCACGAACATCAACCACAGGTGCCAAAGCAAAAGCTATTTCAAAAACTATATCCAAAAGTCAACCAAAATCTGACAATACATTAAAGAAGAAAAGTATTTTCTCTCCCGACAACAGCTCTGAATCTGATACTGAGAGTAAAGATAAACCTAAAGAAAGTCCAAAAGAATCACCAGCTAACAAGAAAGTGACTAGAAAGTCAAGTGAGGAAAAAGAAACTCCAAAAACACCACCTGTGGTAACAGCACCAGAAGAAAGTCCAGCATCCGAAATTAAAGAGAACACTAAAAGAAGAAGCAGTAGAAATAGTGGACCTCCAGCAAAGAAGGCAGTAGAAGATAAAAGTGCATCATCTTGTTCTTCAAGTCAATCTTCTGTTGAGTCTGTTTCTTCGGAAAGTGACAGTGAATCAAACTCTAAGAAGGAAACTCAGAAGACTACAAAAACTAAGCCAAATGTAACAACAAACAAGGTGCAAGAGACAGCAGCAAAAAGTGGTGACTCTGGTGAGTCAGCTGTAAGTACTGTGCCGAGGAAATTGACCAGGTCATTCTTAGCTCGTGCCAACAGGCTGGCTAATGCATCAAGACCTGCTCACACAGACACCGACTCAGAGGCTGAtgacaaaaataatgataaaattaaagatataaagaaaaatttgaaGGGACGAGCACCAGTACCAAGGTCTCCAGTTGTAGCAGACACAGCTCCAGTAATGCCATCAGAACGGTGCTGTCCTGTCAGAGGCTGTGATTCCTCGGGGCATTTGGGAGGTAAAGCGAGCCGTCATTTTACATGGGATGCATGCCCAATGTATCACAACGTGACGGCAGCGTGGTGCGTAGCAGCAGCCGAGGAGCGCGCTGCTGCCACCGCTGCCAGGAGGCGAGCGCTCGCCGCGCTGCAGCAGCGGCCGCGCGCTATGCCCACAATCGAGCAGCGGGCTTATCAACTCAAAGTAAAGGTATCCTCCTCACCCGACAATACTGTGGCGCAGTGA
Protein Sequence
MTNLDVSNSSTDSSSGSTSDSSSSGSSSTSSGSGSSSSDSESSTSDTPPVTAAAVPPKSPTKPTEEANKKEEPKPRRSSKTKTSSSEEEAPKPVSPKAATPKRRGSTKPKSATSVLAKGKPASRTSTTGAKAKAISKTISKSQPKSDNTLKKKSIFSPDNSSESDTESKDKPKESPKESPANKKVTRKSSEEKETPKTPPVVTAPEESPASEIKENTKRRSSRNSGPPAKKAVEDKSASSCSSSQSSVESVSSESDSESNSKKETQKTTKTKPNVTTNKVQETAAKSGDSGESAVSTVPRKLTRSFLARANRLANASRPAHTDTDSEADDKNNDKIKDIKKNLKGRAPVPRSPVVADTAPVMPSERCCPVRGCDSSGHLGGKASRHFTWDACPMYHNVTAAWCVAAAEERAAATAARRRALAALQQRPRAMPTIEQRAYQLKVKVSSSPDNTVAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01495442;
90% Identity
iTF_01495442;
80% Identity
-