Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_029030555.1
Location
JARDVY010000037.1:11306228-11309743[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-06 0.0036 18.0 0.0 2 31 292 325 291 333 0.86
2 2 3.3e-10 4.1e-07 30.6 0.1 2 43 373 419 372 421 0.87

Sequence Information

Coding Sequence
aTGCGGTACAGTTTAATTGTCTTTTTAGCACTTATGATAAGCGTAGCCGCGTGGGATGATGACGATTTAGAAGTTTTTGACGTTGTTGAAGAAGTTAATCAGAATTTTTACGAATTATTAGGTGTTACACAGgAAGCATCACAATCTGAGATTAAAAACGCATTTAAGAAGCTTACATTAAAGCTACATCCAGATAAGAATAGTGCTCCAGATGCTGATGTGCAGTTCCGAAATTTAGTCTCAGTGCATAATATTCTTAAAGATCCAGGAAAAAGAGAAAAGTACAATGAAGTGCTCAAAAATGGTCTTCCAAACTGGCGAtcagctgtttattattatcgaCATGTAAGAAAAATGGGCCTGGCGGAAGGATCTgtgattctttttattattattacatttggGCAGTATGCTGTTGGTTGGGCAGCATATGCAGAAAAGAGGTTTACAGcaGAACAAATACTGAATAGTAGAGggaagaaacaaaaaaaatcaggCTTTGATACAGGCCTAGCAGAGATATTGGAACAGCTTCCTAAACCGAGCATTAAAGACACACTGCCATTCCAAATACCAAGGTTCATATGGTGGTCAGTGACTGCTATCCCCAGAGGTGTAATAGAGCTGAAGAGGcaaatgaaagaaaaagaagaagaagcaaAGCGACAGAAAAAgaaAGAAGAGGAGGAGAGTGCGCGTGCGGAACGCGAGGCGGCTGCGGCGGAGGCGCGTGCGGCGACTGGGAGCGTGCGCAGGAGGCGTGGCTTCGTGCCACCCGCGCGCGATGCCTGCCTGCTCGACGCGGCCGACGAGCCGCACGCCAACGCTCCGGTCATAGAGCCCGTCAAATCTGCACCACCACTTATAACCGGTGGGCTGTGGACGGACGATGATCTGGCCGAGTTAGTGCGGCTCGTGAAGAAATACCCTGGCGGCAGCTCTGAACGTTGGGAGCGCATTGCGGAGGCTATGTGCCGAAGCGTGCCCGAAGTCACACACGTAGCCGCGCGCCTTAAGGACAACTGCTACAAGATACCTGGACAGGAGCAACAAGAGGAGCCCATCCTGGAACCACCCAAAAAGGTGAAAACTCGCAAAACAGAGGAAGTCAGCGGCGGTAATTGGTCGCAGAGTCAACAGAAGGCGTTGGAAACGGCACTGGCCAAGCACCCGAAGGGTGGTGCAGGTGACCGCTGGCAGAAGATCGCCAGCACTGTGCCAGGGAAaactaaaGAGGAATGCATGCAGaggtgtaaatatttatcagaGGTTGTGAGAAAACAGAAAcagaaggaagaagaagaatcgaAGGAGGCACAGAAGAACGGCGATGTAATGATGCTGGGCGATGAAACAAGCtcgtaa
Protein Sequence
MRYSLIVFLALMISVAAWDDDDLEVFDVVEEVNQNFYELLGVTQEASQSEIKNAFKKLTLKLHPDKNSAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSVILFIIITFGQYAVGWAAYAEKRFTAEQILNSRGKKQKKSGFDTGLAEILEQLPKPSIKDTLPFQIPRFIWWSVTAIPRGVIELKRQMKEKEEEAKRQKKKEEEESARAEREAAAAEARAATGSVRRRRGFVPPARDACLLDAADEPHANAPVIEPVKSAPPLITGGLWTDDDLAELVRLVKKYPGGSSERWERIAEAMCRSVPEVTHVAARLKDNCYKIPGQEQQEEPILEPPKKVKTRKTEEVSGGNWSQSQQKALETALAKHPKGGAGDRWQKIASTVPGKTKEECMQRCKYLSEVVRKQKQKEEEESKEAQKNGDVMMLGDETSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01140870;
80% Identity
-