Basic Information

Gene Symbol
Arid2
Assembly
GCA_029030555.1
Location
JARDVY010000011.1:3744454-3770708[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-20 1e-16 61.7 0.0 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATggccaaatttcaaataaatacaaaatcgaaagattatttaagggataaggaaatatttcttaaagatTTAAAGCAGTTCAATgaaagtaaaaaCATCCCGTATAAAATACCTGTTGTGAATGGCATcgaaatagatttatttttattttactcattAGTTCAACAGCGTGGAGGACTAGGGAAgGTAAATCAAAATGACACTTGGGAATCATTTTTAAGACTTCTAAGACTGCCACATCCATGCATTAATGGGTCAACTTTACTCAGGCGGATTTATGGAATGTATTTAGAGAAATATGAAAGAGCAAAAGGTCCACCAGGTcgtgatgatgacaatgatatAGATGAAGATCCCAGGAGAGGCCGGGGTGGTGGAATGCCCCGTATAACTTTTGGAGGTGGGACTTATATATCAGcatCTGGTGAAGCACTTCGAACCAATACAGGAACAAGGATTGCTGGTCCATCTGAGAGACTTACACTATCTTTGCTGTCTCCGATGCCCAATGAACAGGATTTTGCCATCAATGTGTGTACTGTATTGGCTGCAGACCATTCTAATCGCTTGCCATTAAACACAACGCCACATATATTGGATTTTTTGTTGGCACATGCTGGTGTTTATAATCATTCGAGTTTACGAGACACTATTGGACGTTCTTATTATGAGGCACGTGGTCGATATCCGCACGAGTTTTGGCAGATGCGTGCTGGTGGCGGCGGAGCTAAAGAATTGGCTGATGAAAGCAAATTTATGCAACCTGGAATAGAACAGCCTGAGTTAATGGTGCAGGCATTAGCTGCTCACAATACTTTAACTGACTGTTTGATGCAAGACAACGAGATTGAAGAGACGGAGAAAATAATTGATGATGGAGGCTTAgaaatgCTAGAAGATTGGGTAACAGAGCCCTCAGAGGAGGCCCAATTGTTTGCACCAGAGCTACCTGGAGGCGCTAGCTGTGTGTACACGCAAAGGGTACTTCAAATAGCTTCCATTATTCGCTCGTTATCCTTTCATGAAGAGAACATTCAGCACTTAGCCAAGAACACTACGCTTATAAGGTTTCTTCTGCTTTGCGCCAATTGCTGGGTTGGTACTTTACGTCAAAGTGGTTTGGATACCCTTGGTAATGTCTCTACTGAACTTATTATAAAGGATCCAGCCACGTGCCTTATATCCCGGCACATTCTATCAACTATCCAGTCAGCATTGGTGTCACCAGATCGCGCCAGAGTGCTCGCCGCTCTGGAGCTTCTCAACAAATTAGCACAGAACGAGGCAAATGAAGACGCATTGCTGAAAGCGCTAGAAGCTAAAGTATATAGCGATGTGTGCGCCCTGCTGACACTGCGCGATATAATGGTGTTGGTTTGTACGCTGGAATGTGTATACGCGCTAACATCGTTGGGAGATCGCGCCTCGGAGTCCGTGGCGAGAGTCTCTGGTCTCATACATACACTGGTATCCCTTGTTACTGTGGAGGCACAGAGCTACGGGCCGCGCGCGTGCATACTAATGCGCGTGGTGGAGACGGTCAGCGGCCCTAGTGCGGTGCCTGCCAACAACGAGAGAGAATCCATTCCGCCCCCGCCTTTAACTCAGCCAGTGAAACCCGCTCCAGAACCGCCAGCCCCGCCGGTCGCACAGCCATCTCCACCAACTTCTCAGCCAACAACTCCCATTTCTTCCATACAACAGTCACATATGCAGCAACGGACCATACAGGAGAACGAGCATTTCGCGCAGGCGTGGCTACGTTCAACTTACGAGCCGCTGCCGTCGAACGATAACAGCGCGTGCGACGCGGCGGAGGTCTATCGGCAATACCTCGCGTGCTGCACCAAGCTGGGCAGAAAAGGGGTCATCGCACCGGCGCACTTTCCCAGGCTTGTCAGaaCTGTTTTTGGCGGAACAGTTGGCCCCAACACTATTACAATAGCAACCGGTGAAACCCAGCAGGTGTACATAGGGATACGTGCAAGGAATGTGCAGAATAGAAACAGTTCTCCAGCCGGACCATCGTCTCCAATACTGAAAGCGCAGCTAACCAACAAAACAGGGCCTGTGGAGGTAAAACCGGCGGTAGTCGTGCAAGCTCAGGCTCAGAGTGTGCCTGCGCCGGCGCCGGCTGCACAGCCGCATCAGCAGCTCACGCAGGCGTTGGACGCGCCTTCCAACACCACACTCATTAAGCACTTGCTCGCACataaagtaagccctgcccTACAGCAACCGCAAGTAGCACAGCGACAACAAAGCCAACAAAGAGTTGTGGGTCCTTCGACCTCCAGTGCTGTGGTGGTGCAATCTAACGTATCGGGAATGGATGTAGACCCGGAAGCTTTGATCAAATGCACAACCATCACGCCCGGCGGTGTTGCCAGTAACACGCCAACTTTGCAAGGCGATaagGTCATCATCAATACATCGGAGGAAGTTATAGTTCCTAAAGAGGAACCTGTACAGATTCAAATAGATGAGCAAGCTCAGTTGACTATAAAAACAGcgcaaaataaaatgttagccGATCTGCTAGAGAAGAAATCAAACCCGCCGGTGCAAGTAGTACAGATGAGTCCACAATTAAACGCGCCAACAATTCAAATAACTGAAACAGGCCAAATAGTACAAGTGAAACAGGAACCGAATCCAATTATACAGATGAACGCAGACGCTGGTATTGTAACTCAGGGAAGTCCATATTACCAAATTAAAAACGATCAAGGCCAATTGGTACAAATTAAGAACGAACAGggacagataataaatttgaaaagcGACCAGTTGCAGGGATCCATGGTTCAATATAAGAACGACCAAGGTCCGTTTGTTCAGATTAAGAACGACGGTCAGTCTCTGGTCCAAAGTGGACAGATTATACAACAAAGCGTTATTCAATCTTTGAAAAGCGAAAAAGATCAGATTGTAGAAACTGTGGTCACAGATCACTCTTACACCGAGCCGCCGGCGAAAAAGTTGAAGACCGAAGATAAACGTGAGaACAATTCACCTCAGGAGAGTGTTTCCAAGACCGCGGCTAACTTATACGCCGCTCTGGCCGCATCAGCGTTAGAAGATGAGGAGGATTTGCTGCCACCTAAACAAGAAACAGTGGATGTCATCCCGCCTCCGGTTTTAGTAGCGGGGGGTTCTGACAGCGGGTCTGTCATTATTCAGGAGCCTTTGATCCAGGTGCAGCAACCGGCTCTCCAGGTGCAGGCGCCCACGCTGCAGGTGCAACAACCTACTCTCGTTCAGCAGCCAGGAATACAAATGCAAGGTTCTACGATACAGatGCAGCCACCAGCAATGCAAATGCAACAGCCGATGCTGCAAGTGCAGCCAATGGATGTTCAGAACATTATCGCGTCGCAATCCGGCCAGATCATATTGCAAGgaGGCCTCGGTTACATAGCCCAGAATATTCCCGGCAACATGATGCAGAAGACGATTATAATAGTGCAGGGTCCCACGGGTGGTGGTCCACTCACACTTACGGTGAACAACCCCGCGGGGCTGGACGAAGCGACGCTAAACACCCTCATTGCACAAGCAACAGAGGCGATAACCCAACAGCAAATCATACAGAACACTGGAGTAATACAGTCGGCACAGAGGGTGATTGTGAGCCAACCTACATTAGTGAGCACGTCACAGCCGATCACTATGGTCAAAACGGCCATAGCACAGAACACGTCACAGATCACGCCGAGTCAGCAGCCGATAATTACCTCTCAGCCCCAACCGCACAAAGCGCAAATCGTGAACCCCACCCAGACGCAGCAGATTGTCGTATCGCAGAAGCAACCTCCCGCCCTCATAACTACATCCTCCAGCAATCAGTTGAGTGGCAGTCAACAAATTATACAAAGCAATCAACAATTGTTGCAAGGCAACCAACAAATTATCGCCGTTTCTAACAATCAACAAATCATTATGAATGCTCCCATGAAGCCCGGCGTGCATAGAGTGGTGCAGCCGCAGCGGAGTCAAATGGGCAATGCACCAAATTCTGCAAATCAGACCGTACCAGCGCAGATTGAAACGAAGCCCAGCGTGATACAGAGTAGTTCGAAATCGCAACAGCCGGTAGTGCGCCAAGTCATCACGAGACAACCGGTCATGGTGGGGAATACAAAGATAGGTGATAAAGAGGTTGTCAGTCAATCTGTTACAGAGAAACCACCAATACCGAAGCCAACGGTGACTCCGCCGCCAGTTGCTTCAACGTCTGTTATAGCTGAAGACACGCCGTGGATATGTCATTGGAGAGGATGTggaaaGTCATTTGCGAATGCTTCCGAAGTATTCACGCATGCGGCTCGCATCCACTGCCCCACCACGGCCGGGGGCGAAGCGCCATGCATGTGGCTAGACTGCGACCGGGTCCCCAGGAAAACATTCGCTTTACTCAACCATCTGACGGACAAACATTGCACGCCAGCTgcgttaaaaactatattcaaTTCGCGACGGCATGCGGCGGCTGAGGCGGAGGCAAATAAGCCGGTGTCCCTGGGGTACCCGCCCAACGCAGCCCTCGCCGCGCTCAACAAGCACGCCGCCGACATGTTCAACCCTCGcgaactgatgGATGAAAACGAAGGTCCTGTTACGAAGAGTATACGGTTGACGGCAGCATTGATTCTAAGGAATATTGTGATATATTCCAACACGGGGCGTAGATTGCTGCGTCCATACGAAGCTCACCTGGCATCCATAGCTCTGAGCACCGTGGAAGCATCCAGAACCATTGCTCAGGTTCTCTACGATATGAATAACATTTGA
Protein Sequence
MAKFQINTKSKDYLRDKEIFLKDLKQFNESKNIPYKIPVVNGIEIDLFLFYSLVQQRGGLGKVNQNDTWESFLRLLRLPHPCINGSTLLRRIYGMYLEKYERAKGPPGRDDDNDIDEDPRRGRGGGMPRITFGGGTYISASGEALRTNTGTRIAGPSERLTLSLLSPMPNEQDFAINVCTVLAADHSNRLPLNTTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPHEFWQMRAGGGGAKELADESKFMQPGIEQPELMVQALAAHNTLTDCLMQDNEIEETEKIIDDGGLEMLEDWVTEPSEEAQLFAPELPGGASCVYTQRVLQIASIIRSLSFHEENIQHLAKNTTLIRFLLLCANCWVGTLRQSGLDTLGNVSTELIIKDPATCLISRHILSTIQSALVSPDRARVLAALELLNKLAQNEANEDALLKALEAKVYSDVCALLTLRDIMVLVCTLECVYALTSLGDRASESVARVSGLIHTLVSLVTVEAQSYGPRACILMRVVETVSGPSAVPANNERESIPPPPLTQPVKPAPEPPAPPVAQPSPPTSQPTTPISSIQQSHMQQRTIQENEHFAQAWLRSTYEPLPSNDNSACDAAEVYRQYLACCTKLGRKGVIAPAHFPRLVRTVFGGTVGPNTITIATGETQQVYIGIRARNVQNRNSSPAGPSSPILKAQLTNKTGPVEVKPAVVVQAQAQSVPAPAPAAQPHQQLTQALDAPSNTTLIKHLLAHKVSPALQQPQVAQRQQSQQRVVGPSTSSAVVVQSNVSGMDVDPEALIKCTTITPGGVASNTPTLQGDKVIINTSEEVIVPKEEPVQIQIDEQAQLTIKTAQNKMLADLLEKKSNPPVQVVQMSPQLNAPTIQITETGQIVQVKQEPNPIIQMNADAGIVTQGSPYYQIKNDQGQLVQIKNEQGQIINLKSDQLQGSMVQYKNDQGPFVQIKNDGQSLVQSGQIIQQSVIQSLKSEKDQIVETVVTDHSYTEPPAKKLKTEDKRENNSPQESVSKTAANLYAALAASALEDEEDLLPPKQETVDVIPPPVLVAGGSDSGSVIIQEPLIQVQQPALQVQAPTLQVQQPTLVQQPGIQMQGSTIQMQPPAMQMQQPMLQVQPMDVQNIIASQSGQIILQGGLGYIAQNIPGNMMQKTIIIVQGPTGGGPLTLTVNNPAGLDEATLNTLIAQATEAITQQQIIQNTGVIQSAQRVIVSQPTLVSTSQPITMVKTAIAQNTSQITPSQQPIITSQPQPHKAQIVNPTQTQQIVVSQKQPPALITTSSSNQLSGSQQIIQSNQQLLQGNQQIIAVSNNQQIIMNAPMKPGVHRVVQPQRSQMGNAPNSANQTVPAQIETKPSVIQSSSKSQQPVVRQVITRQPVMVGNTKIGDKEVVSQSVTEKPPIPKPTVTPPPVASTSVIAEDTPWICHWRGCGKSFANASEVFTHAARIHCPTTAGGEAPCMWLDCDRVPRKTFALLNHLTDKHCTPAALKTIFNSRRHAAAEAEANKPVSLGYPPNAALAALNKHAADMFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRLLRPYEAHLASIALSTVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01140724;
90% Identity
iTF_01494103;
80% Identity
-