Basic Information

Insect: Ornithomya fringillina
Gene Symbol: stc
Assembly: GCA_963978525.1
Location: OZ021690.1:2343698-2348205[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.9e+04 -4.5 1.6 15 19 714 718 713 718 0.81

2 14 0.099 9.5e+02 0.1 0.6 4 10 747 753 746 755 0.95

3 14 1.2e-05 0.12 12.5 19.8 2 19 754 776 749 776 0.84

4 14 2.9e-06 0.028 14.6 13.5 3 19 814 830 812 830 0.91

5 14 4.6e-07 0.0044 17.1 17.5 1 19 870 888 870 888 0.98

6 14 0.0002 1.9 8.7 17.4 4 18 936 950 929 951 0.86

7 14 0.0028 27 5.0 7.7 1 11 991 1001 991 1003 0.96

8 14 1.5 1.4e+04 -3.7 1.0 4 10 1006 1012 1005 1013 0.63

9 14 6.4e-10 6.1e-06 26.2 15.5 1 18 1018 1035 1018 1036 0.97

10 14 2 1.9e+04 -4.3 0.9 6 10 1065 1069 1065 1070 0.81

11 14 2 1.9e+04 -7.7 11.3 10 18 1083 1092 1072 1093 0.79

12 14 9.2e-09 8.7e-05 22.5 10.0 1 17 1129 1149 1129 1155 0.86

13 14 1e-06 0.0096 16.0 13.2 1 18 1161 1179 1161 1180 0.90

14 14 1 9.7e+03 -3.2 1.5 8 12 1196 1200 1189 1200 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.9e+04	-4.5	1.6	15	19	714	718	713	718	0.81
2	14	0.099	9.5e+02	0.1	0.6	4	10	747	753	746	755	0.95
3	14	1.2e-05	0.12	12.5	19.8	2	19	754	776	749	776	0.84
4	14	2.9e-06	0.028	14.6	13.5	3	19	814	830	812	830	0.91
5	14	4.6e-07	0.0044	17.1	17.5	1	19	870	888	870	888	0.98
6	14	0.0002	1.9	8.7	17.4	4	18	936	950	929	951	0.86
7	14	0.0028	27	5.0	7.7	1	11	991	1001	991	1003	0.96
8	14	1.5	1.4e+04	-3.7	1.0	4	10	1006	1012	1005	1013	0.63
9	14	6.4e-10	6.1e-06	26.2	15.5	1	18	1018	1035	1018	1036	0.97
10	14	2	1.9e+04	-4.3	0.9	6	10	1065	1069	1065	1070	0.81
11	14	2	1.9e+04	-7.7	11.3	10	18	1083	1092	1072	1093	0.79
12	14	9.2e-09	8.7e-05	22.5	10.0	1	17	1129	1149	1129	1155	0.86
13	14	1e-06	0.0096	16.0	13.2	1	18	1161	1179	1161	1180	0.90
14	14	1	9.7e+03	-3.2	1.5	8	12	1196	1200	1189	1200	0.69

Sequence Information

Coding Sequence: atgtcggctgcCGATTCTGAagaaccaccaccaccgccaccttTATCACAATTGTGGCCAGGTTTTGGTTCAACTACATCTGAACTAAACATTGGCTTAAGTGGAAGTAATATATTTGATGCAGGTAGTAACGGAGGTGACGTCAATTCTACCCATAACTTTCATTCAAACCTTGGCCTTTCTAATCTAGCAAGCAAGGGGCATACAAATGacaattatgtaaattttaatcaatttatagAGCAACACAATCTAATGGGAACTACGGGAGTTCGTGTTAATgttagtggtggtggtggcaatGGTGGCAGTGATGGCGTTGGTGATAATGATCGCGGAGCATTTTCCCTAATGGATGCCACTTCCCATGAGGCTGCACACAATCCTTCACCTAATGCTGATGATGCGTTATTctgtttaaagcaaaaaagcaacaacaatcccAGCAGTCATAATGTATATAATGCGGGAGGTGCTTCATTCTTTCAGCAAccaaatCGTTTCTGCTCTACTGGAAGTGATCGCGGTGACAGTGGCGGTGGCGATGGCGGTGGCGCTGGTCCTAATGTTCcatttgatttttctttcaatcaaCATTCTGCTGTGAATAGTCTGTTTAGTGACGGCATGAGCTTGTATGGTGCAACAAATGACGGCCTTCAAAATGTTGCACATAGCGGTGGAAAATTGGCGCAAATTGATGACAACATTTATAAGGCAAGCCCCCTTAATAACGGTCATGGTTATGAAAATTTGTATACACCATTTAGCAATAACGGTACTACATACTATGCTAATCCATTTGCTACCGGTTTCGATTTCACATCGACAAAATTACAACCTAGTGCACCGGAATTTGTGCCACGTTTCGATCAACTGTCAATCAATGACAACAAAagtcaaataaatattattgaaaatacaaCACAATCAAGTACGAAGGAAGAAATCGATGAAGACggtttgaaattgaaaataaatcaagaggagaaagaaaaaaacgcaTCATACAGTCCGTGTGTCGATGGTAGTGGTGAGCAGCGCAAAGAGCAAATTGATCAATTCCAacgaattttcaaaaataacgACAGAAACGTTACGCAACCTAATAATAAAAGtgtcaataattttaatcacAATCAACATCAGAAAAAATCGTATAATCGTCTGGAAAAGAATATGGAGAGGTTTTCGCGGCATTTCGTggacaataaaaaattgaatgacTCATCGTCGAATTCGAATTCGTCGTCAACGTCAGCAGCGGGGTGTTCATCTGTTACAACAATGCAAAATTCCGTGGAAAGTAAGCAAAATGAAAATCATCGTGAAGGAGGAGGCAACCATCAAAATAACAGCAACTACAGCCACAACACCCACAACAGCCACAACAGCAACTACAACCACTACAGCAACTACAATCACAACAGCTACAACTACAACCACAACCACAATAACCACAACCACAGCAACTACAGCAACTATagcaactacaactacaactacagttacaactacaacaataaccataattacaacaattacaacaacaataatatcagAAGAGCACAAAATGTTCGCAATGGTGGCAGTATGATGGTCGGCACAAATAATACTCAAGATTATTCGCGTGAAGAGCAGCGATTCGATCGTTATTTGGAGAGAGGCGAACCGCGTGAGAGGGGAAATTTTAATGGCGGCAGCCGGTACAATCGTGAACGCGATTATCATCAACGTTTCGATAATTATAGGAGCAATAAACGTCGCGATGATTGGAATCGTAATCGTGATCGCGTCGTTGGCTATCGTGTGGAGGAGAAATACTCTTTTGACGGCAGTAGAGAGAGTCCGTTGCAAACGCCGGAAAAGAAACCAATTAATAATGGTtacaattataacaacaacaccaacacggGTGCCGGAACGTCACCGAAAAAGTTTTATGccgaaaatgaaaaattatcgCAACGGGAAAAGTTAATGCGAGACATTGAAATACGGCGTTTGGAGTGCCTGGTGTGTGTGGAGCCCATCAAGGCCCATCAGGCTGTGTGGTCCTGTTACAATTGTTATCACATTTTGCATCTGCAGTGCATTATAAAGTGGGCCTCATCGTCCAAGTCGGAGGACGGTTGGCGCTGTCCAGCCTGCCAGAATGTGGAAAAGGACGTACCTCAcgattattattgtttctgTGGCAAGGTGAAAAATCCACCAAACAACCGGCTTGATTTGGCCCATTCATGCGGTGAGGTGTGCGGTCGGGTGGAGGGTTGTCAGCATGCCTGCACTTTACTGTGCCACCCCGGACCGTGTCCGCCCTGTCAGGCCAACGTAAAGCGCGCCTGCGGCTGCGGCAGGACCACCAAAACAATGCAGTGCTGCCTCAAGGAGACAATTGACTGTGACGCTGTTTGTGCGAAGATGTTGAATTGTGAGGTTCACGAATGTAATGAAAAGTGTCATCTGGGAAAGTGTCCACCCTGCAAGGAAAAGGTGGCACAAACGTGTCATTGCGCCAAACAGGAGCGTGAAGTGGTCTGTACGCGTGACAGTCACGGCAAGCTTGTTTACTCCTGCGGTAAACCATGCGGCAAAGAGTTGTCGTGCGGTAATCACAAATGTAAGGATTGTTGTCACGCCGGTGAATGCCGCACGTGTAAGCTGTCTCCCGAGGTGATCGACTCGTGTCCATGCGGTAAACTAGATTTGGTGCCCGGTGAACGTACCTCATGCTTAGATCCCGTACCCGTCTGTGGGGGTGTTTGCGGCAAGACATTGCGTTGCGGCAAAGCTACTCATCCCCACCACTGCACTAGCAAGTGTCACCTGGGTCAGTGCCCGCCCTGCAACAAGCAGACCGCGGTCAAATGTCGCTGCGGCCATATGGATCAAATGATTAAGTGCCGCCAGTTAAGCACCCGAGCTGATGACGCCCGCTGCAAGAAGAGATGCGTCAAGAAGCGCTCCTGCGGCAAGCACAAGTGCAATCAGGAATGCTGCATTGACATCGATCACGTATGCCCACTGCCCTGCACCTATACGTTGTCGTGCGGTAAGCACAAGTGCGATCAACCCTGCCACCGTGGCAATTGTCCGCCATGCTATCGCTCCTCCTTCGAAGAATTGTTCTGCGAATGTGGCGCCGAAGTGATCTACCCGCCAGTACCCTGCGGCACTAAGCGCCCTCTGTGCAAGCGGCCATGTTCGCGCAAACATCCCTGCGACCATCCACCACAACACAACTGTCATTCGGCCAGCAATTGTCCACCTTGCATGATATTCACCACTCAGTGGTGTTACGGTCAACATGAGCAGCGCAAAACTATACCGTGCTCTCAGCAAAGTTTCAGCTGCGGTATGTTCTGCAATAAGCCGTTGCCGTGTGGTCGTCACAAATGCATTAAGACTTGTCACGAAGGCGCCTGTCAAGTTGCTGGAGAAACGTGCAAACAGAGCTGTCCCACAATAAGAAGCTCGTGCGGTCACAAGTGTATGGCGCCGTGTCATGACGGCGACTGCCCAGAGACACAGTGCAAggaaatggtGGAAGTGCAATGCGAGTGCGGTCATCGCAAACAGATGCGTCCCTGCCACGAATTGGCGCGCGAATACAGTCGCATTGCTACTGCTCAGTTGGCATCGTCTATGGCCGAAATGCAACGCGGCAATTACATGGAGCTAAGCGAAATATTGGCCCCAATCAAACTCACCAACAAGACCAACAAAACGTTGGACTGCAATGAAGAGTGCCGCACTCTGGAACGTAATCGCCGTTTGGCCATTGGCCTGCAAGTGCGCAATCCcgatttgccacaaaaattaatgacaaAATATTCCGACTTTATACGTAATTTTGCTAAACGCGACCCCACCCTGGTGAAATCGGTACACGAAGCATTGACTACGTTGGTGAAACTGGCGAAGGAGAGCAAACAAAGATCGCGCTCACACTCCTTTCCAACCATGAATCGTGAGAAGCGGCAGCTGGTGCACGAGATGTGCGAAATGTTTGGTGTGGAGTCGGTAGCGTACGATGCCGAACCCAATCGCAATGTGGTGGCCACCGCTTACAAAGATCGGTCGTGGCTACCGGCCACCAGCATTATGGAGGTGTTGCAACGTGAATCGGGCCAGAGGCGTGTCCCAGTGCCCAGTAATAATGCATGGGGCTCGAAGAGATAA
Protein Sequence: MSAADSEEPPPPPPLSQLWPGFGSTTSELNIGLSGSNIFDAGSNGGDVNSTHNFHSNLGLSNLASKGHTNDNYVNFNQFIEQHNLMGTTGVRVNVSGGGGNGGSDGVGDNDRGAFSLMDATSHEAAHNPSPNADDALFCLKQKSNNNPSSHNVYNAGGASFFQQPNRFCSTGSDRGDSGGGDGGGAGPNVPFDFSFNQHSAVNSLFSDGMSLYGATNDGLQNVAHSGGKLAQIDDNIYKASPLNNGHGYENLYTPFSNNGTTYYANPFATGFDFTSTKLQPSAPEFVPRFDQLSINDNKSQINIIENTTQSSTKEEIDEDGLKLKINQEEKEKNASYSPCVDGSGEQRKEQIDQFQRIFKNNDRNVTQPNNKSVNNFNHNQHQKKSYNRLEKNMERFSRHFVDNKKLNDSSSNSNSSSTSAAGCSSVTTMQNSVESKQNENHREGGGNHQNNSNYSHNTHNSHNSNYNHYSNYNHNSYNYNHNHNNHNHSNYSNYSNYNYNYSYNYNNNHNYNNYNNNNIRRAQNVRNGGSMMVGTNNTQDYSREEQRFDRYLERGEPRERGNFNGGSRYNRERDYHQRFDNYRSNKRRDDWNRNRDRVVGYRVEEKYSFDGSRESPLQTPEKKPINNGYNYNNNTNTGAGTSPKKFYAENEKLSQREKLMRDIEIRRLECLVCVEPIKAHQAVWSCYNCYHILHLQCIIKWASSSKSEDGWRCPACQNVEKDVPHDYYCFCGKVKNPPNNRLDLAHSCGEVCGRVEGCQHACTLLCHPGPCPPCQANVKRACGCGRTTKTMQCCLKETIDCDAVCAKMLNCEVHECNEKCHLGKCPPCKEKVAQTCHCAKQEREVVCTRDSHGKLVYSCGKPCGKELSCGNHKCKDCCHAGECRTCKLSPEVIDSCPCGKLDLVPGERTSCLDPVPVCGGVCGKTLRCGKATHPHHCTSKCHLGQCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHVCPLPCTYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPLCKRPCSRKHPCDHPPQHNCHSASNCPPCMIFTTQWCYGQHEQRKTIPCSQQSFSCGMFCNKPLPCGRHKCIKTCHEGACQVAGETCKQSCPTIRSSCGHKCMAPCHDGDCPETQCKEMVEVQCECGHRKQMRPCHELAREYSRIATAQLASSMAEMQRGNYMELSEILAPIKLTNKTNKTLDCNEECRTLERNRRLAIGLQVRNPDLPQKLMTKYSDFIRNFAKRDPTLVKSVHEALTTLVKLAKESKQRSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKDRSWLPATSIMEVLQRESGQRRVPVPSNNAWGSKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00384967; iTF_01114688;
90% Identity: iTF_00384967;
80% Identity: -