Ofri005196.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- pnr
- Assembly
- GCA_963978525.1
- Location
- OZ021690.1:43077988-43085103[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.85 2.3e+03 -1.6 0.6 1 9 59 67 55 68 0.76 2 2 4.4e-17 1.2e-13 50.5 1.9 1 34 581 613 581 615 0.98
Sequence Information
- Coding Sequence
- ATGTGTggtattttaaatcaattaaacagAATATGTCGTTTGTGCTTGACTCTTTTGCACGAGGATGAAATATCGacacataaaataattacctCAGATCGTGTACAAGGCGAAACTTGTGAATGTTGCAGTGTAAATTGTGAAAACCCGAGCAGacattgcaacaacaaaatatgcaaaaactGTGATAACATAGAAacacaaatttcaatatattctgAAGAACAGTATAAATCAAGAATACCGAATGTGCCTTTGTCACTGACCTCCACTGAAGCCTACATAAATGATCACAATGTTCGTGCCCCTGCATCCACATTAAAACAACATCGAACTCACACGGGTTTATCTGAAAGCAATGATAAGGCTTTGCAATCTATTTTCGCTAACCTTAACGGGGAAGATTGTTGTGATGATTCACCTCTTTTAGTAACTCAAATACTCAAGTGTCTCTCTGTAGAGGTTGTGCCCAACGATGGACTACCAAATGTGGTTTGTTGTAAATGCAGGTCTCAACTCAAAGCATTCTGGAGCTTCAGATCTTTGGCTCAAAAGGCTGATGTGGCACTTAAAAAATATCTCGACATAATTAAAACTGCCGAAAAGGATGCGATGGAGGGTGAAATCTATTTAAATGAGATTCTCAAGTCCAAGTCATCCCCAAAATCATCCTCAGAGAGAATAGCTGCCAAAGCATTAACCGAACTATGTAATTCAGCTAAAGCCAAGTTTGCTTCAATGGAGGCCAACAACGGGAATGCAACCTCTTTAAATGCAGGACTCAAAAGTAATTCAAACAGTATTAAGATGAGAACGATTGCAAAAAGTATGGAGCGCGAGAAGAGCGACACAAAAGATAAAATATCCATTTGTAACATGCCAAGATATGTAAATGAGGGTACGATAAGAGCGCACGAAATATTGGCCAAGGAGGAAAATGACAAACAATTAAGCTTACAAAAGCAACAGCAATTGGAAACAGCGGCAGTTCTAATggatataagtaaaaaagtaattatatCGCCACCCTGCTCGAATCCCGAATCTCCACGAGTGAGTCTGGCCCCAGACTCTAGTATTATTCATTCtgtgataaaaaataaacgtcCACTAAATAACAAGATAAAAAGCACTGAAATGGACTTGTCAGTGAAAAAACCCAAATTTGGTCTCACAAATCTCACAGATTTGTTGCAATCAAAGGAATATGAAAAGGATTTcttgaatataaataattatggaTTAAATGAACGTTTAACTATGTTCGACACCAACGAGAATAACTTATCATCAGAATCTGAGCACAGTTTAGACTCGAATCGTCTTGAAATGGATATAACATCTGTCCCTGAGCGTCGCACACCCGACAGTGTGGCATCAGAAGATCATGGTACCGATGCGGCTACAACTCAATTGTGGCAAGCTCTTGCACATTCAGCAGCCAATAATATTGATAACGAAGCTAATCGATTTTTACAGTTGCTTAACAAATCCTTCGCATTTCCAGTTGTACAGTCGAAAGGAGTTATATTAAATGACATAAGCGAGGAGCCAATACCATTAGTAAAGAGTActgatgaaaaatttcatattaagaAGCCAACTGATgatgttttaaataatgatgaaaacttaagcgaaaatattacaaagcaATGTTCAATCTCTTTAGATACTATACATGACAAAAAGAATACCAAAAACTCCTTAAATACGACCAATACTCAGAAGGATATGTCTTGTTCAAATTGTGGCACATTAACGACAACCATTTGGAGACGAAGTGTACGCGGTGAAATTGTTTGTAATGCTTGTGGCTTATACTTTAAACTGCACGGTATCAATAGGCCGCATTCAATGAGGCGAGATACCATACACACACGGAGACGCCGTCCCAAAGATTGCGAAAAATCGGATAAGAAAAaaaacaaattgGAAAACTACTCTTCCGATCTGTTTGATAAGAAGTATAAGGATGATGCTGTAACATCACTGAAAGAGAAAACAACGGATACTCGACATTTTGAGAACTAtggaaataaagaaattattacatttattaaagaaaatggtTCAATATCGGGTGTAATTGAGAGGGATCATCAATTGCAACCAAATATCAAACATGAAACAAACAAATCCGATGGCAAGAGTAAAAATGTGGATGAATTGATGGCGCCGCTTAATCTTGTTTCCaacgaaaataataaattaacataa
- Protein Sequence
- MCGILNQLNRICRLCLTLLHEDEISTHKIITSDRVQGETCECCSVNCENPSRHCNNKICKNCDNIETQISIYSEEQYKSRIPNVPLSLTSTEAYINDHNVRAPASTLKQHRTHTGLSESNDKALQSIFANLNGEDCCDDSPLLVTQILKCLSVEVVPNDGLPNVVCCKCRSQLKAFWSFRSLAQKADVALKKYLDIIKTAEKDAMEGEIYLNEILKSKSSPKSSSERIAAKALTELCNSAKAKFASMEANNGNATSLNAGLKSNSNSIKMRTIAKSMEREKSDTKDKISICNMPRYVNEGTIRAHEILAKEENDKQLSLQKQQQLETAAVLMDISKKVIISPPCSNPESPRVSLAPDSSIIHSVIKNKRPLNNKIKSTEMDLSVKKPKFGLTNLTDLLQSKEYEKDFLNINNYGLNERLTMFDTNENNLSSESEHSLDSNRLEMDITSVPERRTPDSVASEDHGTDAATTQLWQALAHSAANNIDNEANRFLQLLNKSFAFPVVQSKGVILNDISEEPIPLVKSTDEKFHIKKPTDDVLNNDENLSENITKQCSISLDTIHDKKNTKNSLNTTNTQKDMSCSNCGTLTTTIWRRSVRGEIVCNACGLYFKLHGINRPHSMRRDTIHTRRRRPKDCEKSDKKKNKLENYSSDLFDKKYKDDAVTSLKEKTTDTRHFENYGNKEIITFIKENGSISGVIERDHQLQPNIKHETNKSDGKSKNVDELMAPLNLVSNENNKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00384956;
- 90% Identity
- iTF_00384956;
- 80% Identity
- -