Ofri008600.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- grn
- Assembly
- GCA_963978525.1
- Location
- OZ021691.1:30632867-30664232[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-19 5.7e-16 57.9 4.7 1 35 387 420 387 421 0.98 2 2 7.2e-19 2e-15 56.2 6.3 1 35 447 480 447 481 0.97
Sequence Information
- Coding Sequence
- ATGTGTCGACCGCATTTTCATCCGCCTTTAAGTTCATGGTTAACAAGCGATCATAAATCATTTGCACCTGCCAGCCCCTGGGGCAGTCCGTTTGCGTGTCCTCAGGAACCACAAATCGATCACAAATTATCTCAAGTTGGCCAAACGCATCAGTCGGCGGTCACAGCAGCCGGACAACATTCATTTCCATTCCCTCCCACACCACCAAAGGATTCAACACCCGATTCGGTACAAACGGGACCTTCAGAATACCAggCTGTTGTCAATGCCTTTATGCATCAAGCGCAAGCGACGGGTGCTACAAATTTAACAGATACCAGTTGTGCGCTAGATATTAAACCCACCATACATAGCAGTAGCAGTTCAAATCTACATAACGGTGCCAATTCGCAGTCATCGGCACCAAAACAACGTGAAggtactaataataataataacaattcctccaacaacaacaataataataataatagtaatacaaataataataacaacaataataataataataatagtagtaGTACAAGTAATAGAACACATACCCAAGCGTCTGCCTCCTCATCCTCGGCCTCAACAACAGCGGGCGGTGCATCCTCAGCCCAACAGAATGGCCATCATACTGCCCTGAACACCACCCAACACCATcagcaacatcatcatcatcatgctGTAAATGCGGCGGCACTGAATGCTGCCAACAGTGTGGGCAGTTTGTTTGAGGGGGCAGCTCAAGTTCATTATGGTAACTTGGGCAGTAATGGtgcaaataatattaataccaATAGCGGTTATGATAGCAATTATGCGTCATATGCGGCTCATCATCACGCAGCGGCTGCTCAACATCAAGCGGCGGCCGCTGCAGCAGCCGGCATGTTTCAAAGTTCCTCTTTAGTAGCGGCAGCAGCTGCccgccatcatcatcatcaccatcatcatcatcaagtCATGGGTGGAGGTGGCGCGGCGGGTATTGGTAATAATTCCTCCTCCTCCTCAGCTTCCGCTCATTTATCAGGCATGGGTGGTGGTGTGGGTTCACACCATGGTGGTGGCATGTCTTCCACGGGTAATAGTACGGGTTTTAATAGCTCGTCAGATGTTAAGCCAGATGTTAAGCCACGTACTAAACCACGGACCAGTGCGGAAGGACGTGAATGTGTAAATTGTGGTGCCACGTCAACGCCACTATGGCGACGTGATGGTACCGGTCATTATTTGTGCAATGCCTGcggtttatattataaaatgaatggacaaaatcgaccATTAATTAAGCCAAAGCGAAGACTGACCCTGCAGTCACTACAAAGTGCCGCCAAACGAGCGGGGACCTCATGTGCAAACTgtaaaaccacaacaacaaccctTTGGCGGCGTAATGCGAGTGGTGAACCCGTCTGTAATGCCTGTGGCCTCTATTATAAGTTACATAACgTTAATCGGCCTCTTACCATGAAGAAAGAAGGTATACAGACGCGCAATCGTAAATTGTCATCGAaatcgaaaaagaaaaaaggttTGGGTGGTGGTTGTTTACCGATTGGCGGTCATTTGGGTATGGGTGATTTTAAACCCTTAGATCCATCGAAAGGTTTTGGTGGTGGCTTTTCAACAATGGCACAACATGGCCATCTTTCCAGTGGTTTACATCCAGCACATGCGCATATGCATGGCGGTTGGTATACGGGCGGTATGGGTGCATTAAGTGCTTCCAGTGGTCTGCAAGGTGGCTTCTCAACAGCTGGTTCCTTAAGTGGCGGTGTCGTGCCACATTCACAACCTTATCATTTGGGTTTGGGATCTATGggCACTTGGCGTACTGACTATACGTGA
- Protein Sequence
- MCRPHFHPPLSSWLTSDHKSFAPASPWGSPFACPQEPQIDHKLSQVGQTHQSAVTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVVNAFMHQAQATGATNLTDTSCALDIKPTIHSSSSSNLHNGANSQSSAPKQREGTNNNNNNSSNNNNNNNNSNTNNNNNNNNNNNSSSTSNRTHTQASASSSSASTTAGGASSAQQNGHHTALNTTQHHQQHHHHHAVNAAALNAANSVGSLFEGAAQVHYGNLGSNGANNINTNSGYDSNYASYAAHHHAAAAQHQAAAAAAAGMFQSSSLVAAAAARHHHHHHHHHQVMGGGGAAGIGNNSSSSSASAHLSGMGGGVGSHHGGGMSSTGNSTGFNSSSDVKPDVKPRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSTMAQHGHLSSGLHPAHAHMHGGWYTGGMGALSASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01114671;
- 90% Identity
- iTF_01114671;
- 80% Identity
- -