Ofri009370.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- bab2
- Assembly
- GCA_963978525.1
- Location
- OZ021692.1:2883165-2885027[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.1e-07 0.0011 18.7 0.0 8 39 393 424 391 427 0.88 2 4 2.6e-15 5.6e-12 45.3 0.0 2 44 443 485 442 486 0.96 3 4 0.01 22 5.0 0.0 27 37 515 525 511 530 0.88 4 4 1.5e-16 3.2e-13 49.2 0.1 4 41 553 590 553 592 0.92
Sequence Information
- Coding Sequence
- ATGAATCATTTAAAGTGGATGGGGCACTCGGCCACCATATTagatatacataaaaatttacgtaGTGATTTGGAGAGTTGTGAAGTGACGCTAATCGCAAAGGGACATACAGTAAAGGCACATCGTTTTGTTTTGTCCTCCTGCAGCGATTTATTACGTATCTTGCTAAGCGATGTGCCACTGGGTCAAGAGTGCACTGTTATGGTACCCGATATTAAAGGACCATTGCTGGATAGTGTCTTGGCTTTCATATATATGGGTGAAACATGTATATCATCCAGTAATCTATCGGAGTTTTTAGAAGCCATAAATGTTTTAGGCATTAAATCGGCGATTAGTTTTGAATGCAATACCAACGCTTTGCAAAATGCCTCCCCAACCACCCTAAATACAATTGCCAATGGTGGCAGCCCCAGTACAGCGCAAACTGTAAGTGACTGTGCTGTAACTGGTGATACCGTAACGTTAACTTCAGCAGATATTATAGCTCATGACAATTTAATGGCACCCAAATTGGGATCTTCTCATATTATCGCTACCAATTCGCGGGAATTGGAACTTCTTGATGTGTACCAGGAAGGGGCACATCATAAAATTACATATTCCATTGAACATATACCAGGTGCTGACAGTGGTAGTGAGTTTATATTAACTGAAAATTCGGGAACATTTACGATAACACAAAATCCCAAAATTGAATCCACTTCTAGCACAGCATCTGGCCAAATGGATGTTAGCGAAGAAGATGATGCTGATACTGTTGAAGCGCATATCATTGAAGAGTACAACAGTACGGAAGATCCTTTACTACAATTAACAGAAAATGCTAACGAAAGCGCAACTGAGGTGAACGTTACACAAACTCAGACTACTGACTCCAGTACGCCTCTTTTTCATGCTAAACCAACCAAGAGCagatatttgaaatttaaaccACAAGGTGGCGCCaccaatgtacaaaaattagaaCAAAATCTTAATAGTGTTATGGATACGACTGAATCCGGCTCAGATGATCAGCTTGGTAGTAGTACATTGCAAATATCCAATGAAAGTTGTGACATGGATAAAGACAATAAGGACATTAGCAATGAAATAAGCACCATTAATGAATCAAACTCAAAGTATTTTACAGCCTCAGCAACCAACAGCAGCGGTTTAAGTGCCACCGATTTGGCATATCAAGCCATGGTAAATGATAATTTAAGTTTGCCGAAAGCTGCCGTGAAATTCAATGTTTCCAAAACGGAATTATGGCGGCGAGTACGAAATACTGGTGTAGACACCTACATAACATCCGAGGCTCAAGCTAAACCCTCCCGCCAAGAAGAAGCCATCGACTTGGCCTGTCAGGCGGTCATCTCTGAGGGTTACAGTTTGCAAAAGGCTGCCGTAAAATATGACATTTCTAAGACGGTTTTATGGAGACGGGTGCGCAAGCATCCCGATTATATGAAAACGGTACGTGAGAATCCGGTAATAACGAAAGCATATGAAAGATTGAAAACGGGTGAATCATTGAAAAGTATTAGTCGCGATTTGGATATACCCATGTCTACGTTGCACCGCCACAAAGTACGTCTCTCCCAACAAGGCCAACTTCCCCACTTTGTAACCTGCAAACGTCGTGACATCTCCAAAGatgatttgaaaattaaattagcTAAAGCGGTACACGCCTGTGTACATGAGGGTATGTCACAAAATCATGCCgctaatttatatgaaatatcgAAAAGTACTTTGTGGCGTCATTTGCAAAAACGCGTTGCTGAAGCTGAATCGGCTGATGTGGCTGAACTGCAATCCATGGAATCAATGGTAGATGATGATGAGGTCAAAGACGAGGTCATACTTTCTTAG
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRSDLESCEVTLIAKGHTVKAHRFVLSSCSDLLRILLSDVPLGQECTVMVPDIKGPLLDSVLAFIYMGETCISSSNLSEFLEAINVLGIKSAISFECNTNALQNASPTTLNTIANGGSPSTAQTVSDCAVTGDTVTLTSADIIAHDNLMAPKLGSSHIIATNSRELELLDVYQEGAHHKITYSIEHIPGADSGSEFILTENSGTFTITQNPKIESTSSTASGQMDVSEEDDADTVEAHIIEEYNSTEDPLLQLTENANESATEVNVTQTQTTDSSTPLFHAKPTKSRYLKFKPQGGATNVQKLEQNLNSVMDTTESGSDDQLGSSTLQISNESCDMDKDNKDISNEISTINESNSKYFTASATNSSGLSATDLAYQAMVNDNLSLPKAAVKFNVSKTELWRRVRNTGVDTYITSEAQAKPSRQEEAIDLACQAVISEGYSLQKAAVKYDISKTVLWRRVRKHPDYMKTVRENPVITKAYERLKTGESLKSISRDLDIPMSTLHRHKVRLSQQGQLPHFVTCKRRDISKDDLKIKLAKAVHACVHEGMSQNHAANLYEISKSTLWRHLQKRVAEAESADVAELQSMESMVDDDEVKDEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115135;
- 90% Identity
- iTF_00384497;
- 80% Identity
- iTF_01115135;