Ofri016226.3
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- kn_2
- Assembly
- GCA_963978525.1
- Location
- OZ021694.1:24498157-24500792[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-118 1.6e-114 383.5 0.0 205 385 1 211 1 213 0.99 2 2 9.2e-08 0.00044 18.8 13.5 421 514 213 307 211 322 0.65
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGGTTGTTATAGCCACCCAAGTGAGTGTGGAGGGTCCTTTATTAGCCATTTCGGACAATATGTTTGTGCATAACAATTCTAAGCATGGAAGGCGTGCCAAGCGTTTGGATACTACGGAAGGTACAGGCAATACTACAACCCTGTCCATAACGGGGCACCCCTTACAGCCCGACAGTACCTATGATGGTCTGTACCCGCCTTTGCCCGTGGCCACGCCTTGCATTAAAGCCATATCACCTAGTGAAGGCTGGACCACAGGAGGCGCCACCGTTATCATTGTGGGCGATAATTTCTTTGATGGTCTGCAAGTAGTGTTTGGCACAATGCTGGTATGGAGTGAACTAATCACTTCACATGCCATACGCGTACAAACACCGCCCCGGCATATACCCGGAGTGGTTGAAGTCACTTTATCctataaaagtaaacaattctGCAAAGGTTCTCCCGGTCgttttgtatatgtttTAGCCCTTAATGAGCCCACCATAGATTATGGTTTCCAAaggttacaaaaattaataccaCGTCATCCTGGAGATCCGGAAAAGTTGcagaaagaaattattttaaaaagagcCGCCGATTTGGTAGAAGCTTTGTACTCAATGCCCAGgTCCCCTAGCGGTTCTACGGGTTTTAATTCATATGCCGGCCAATTAGCGGTTAGCGTGCAAGATACCGGCACCGGTCAATGGACCGAAGATGATTATCAGCGGGCACAGTCAAGTAGTGTTAGTCCACGTGGTGGTTACTGCAGCAGTGCTTCTACGCCACATAGTTCAGGGGGTTCATATGGAGCCACCGCTACTACAGCTGCTGCGGTAGCAGCCTCAAACGGTTATGGCCCCACCCACAATATGGGCACATTGTCTTCTTCACCCGGCAGTGTTTTCAATTCAACATCAATGTCCACTACATGGCATCAGGCTCTGGTACAACATCATCACACACATCCGCATCATTATCATCCACACCAGCCGTGGCATAATCCAGCAGCATCAGCAGCTACAGCAGCCGtctaa
- Protein Sequence
- MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTTTLSITGHPLQPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVLALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPSGSTGFNSYAGQLAVSVQDTGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTAAAVAASNGYGPTHNMGTLSSSPGSVFNSTSMSTTWHQALVQHHHTHPHHYHPHQPWHNPAASAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00384362;