Basic Information

Insect: Ornithomya chloropus
Gene Symbol: -
Assembly: GCA_963971445.1
Location: OZ020529.1:58998693-59005455[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 6.4 5.3e+02 1.8 0.0 5 21 1161 1177 1159 1178 0.90

2 8 0.025 2.1 9.4 2.3 1 22 1391 1412 1391 1412 0.95

3 8 1.1e-05 0.00089 20.0 0.3 2 23 1433 1454 1433 1454 0.97

4 8 0.00018 0.015 16.1 4.1 1 23 1460 1482 1460 1482 0.98

5 8 8.2e-06 0.00068 20.3 3.3 1 23 1488 1510 1488 1510 0.98

6 8 0.05 4.1 8.4 1.5 1 23 1516 1538 1516 1538 0.95

7 8 0.0014 0.11 13.3 0.0 2 23 1545 1566 1544 1566 0.96

8 8 0.002 0.16 12.8 4.6 1 23 1572 1594 1572 1595 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	6.4	5.3e+02	1.8	0.0	5	21	1161	1177	1159	1178	0.90
2	8	0.025	2.1	9.4	2.3	1	22	1391	1412	1391	1412	0.95
3	8	1.1e-05	0.00089	20.0	0.3	2	23	1433	1454	1433	1454	0.97
4	8	0.00018	0.015	16.1	4.1	1	23	1460	1482	1460	1482	0.98
5	8	8.2e-06	0.00068	20.3	3.3	1	23	1488	1510	1488	1510	0.98
6	8	0.05	4.1	8.4	1.5	1	23	1516	1538	1516	1538	0.95
7	8	0.0014	0.11	13.3	0.0	2	23	1545	1566	1544	1566	0.96
8	8	0.002	0.16	12.8	4.6	1	23	1572	1594	1572	1595	0.96

Sequence Information

Coding Sequence: atGTTGCTTCATAATCTTAATAATGATGTTCATTCTTCAGCAATTACaagaacaacagcaataacaacagcaacagctgCGGATGCAGTGACATCAATTAAATACAACGATCACATTAAATGCGGTGAAGTGTATACGTGGTGGTGTGAAGATGTTTCGTATGCAATCGAGTGTCATTTGTGTCTTGATCGTCCCATCTGTCCCCTAACCGAGTATGCCCAACATATGAACGTTTGGCATTTGAAATgggaaaataataataacaaagaagaagaagaagaagatatgttacaacaacaagaggATGGAAATGGAGATGCTGATGTTACGGTAACAAATGAAAGTTATACTATACAAATAGCATGTCAAGCGACTGAAGAAATTCAAAAAAGTAAATGTGAAATGTTAAATAGTGACGACGCAGACGTAGCAGCTGATGTAGAAGAAGAGGAAAATCTTGATGAACTACATCCACAACCATTCGAACAGGTTTTAATTGAACAAGACAACAGCGACCTAAATGACCTATATAATTTGATCGATgaacaagaagaagagaagCAAGAACAAGAAGATGGTGAGAACAGTTGTAATCATGTTATACGAGAAGAACAAAAAGACGAAGAAGGAGTCGAAGAAGATGATggacaaaaacaaatacaaccaacaccaacaacaacaacaacaaaccccACCAAAAttcaatatgaaaaattacaaaatgagCgTCAAGAAGAAGAGGacgaagaagaacaagaaaaacaacTTTCCAATCATTTATTAAACGATTTAAAAATAGAACAAAATCTTCAAAAGCAAATAGATGCTATGAAAGAATGTTACCGAaagcaacaccaacaaaaTATGCTTAATAGCGTCGAAACCATTAATCAGTATGAGACTCGAAAAAGTAATGAAATTGTAAGAAACGGTAAACAAAGCAACCAAATGATTATAAATGGTATTGGAAGGCAACAACCGCAACAAGACAATGACCACCACGTGAAAGAAGCGGGAATTGATAGAAATTATAAAgatattaatcaaaataaaagtCACAATGTGGAAGAACAATATTCCATAACACCAAAAGAAGAAGCTGCCACAAAGAACCACTGTCCAGAAGGTCTGCTAGAAGAAATTTCAACAAAGAAGGCTAAAAACGAAGAAACTTCAACGAAGATTAGTCAACAAAAAGAATCTCCAAAAAGAAATATGTTACAAGAAGATCTGTTGACGAAGAAAGGTACAAACCAAGAAGCTTCGTCAAAGAAGAGTGTACAAGGAGAATCATTAATGAAGAatgacataaacaaagaaGCTTCCTCAAAAGATAGTCTGCAAGAAGAAACTTTAACTTTAGCTTTAAATAAGAGTATAATTCAAGAAGCTTCATCAAAGAATTGTCTAGAAGAAAAAGTTTTAGTGAAAAAGTATACAAACCGAGACACTTTATCAAAGAATGATTTACAAGAAGAAGCACTAATGAAGAAAGAAAATGTTCTACAAGAAAAAGCAATAATGAAGAAAGGTTCAATTCAAGCAGCTTTATCAAAGAAAGGTCTACAAGAAGAAGGATTACTGAAGAAAGGTACAAGCCAAGAAGCTTCATCGAAGAATAGTCTACAAGAAGAAACCTTTAAGAATAAGGAGATGATAGGGAGGCTTTCAAACAATAATCTACAAGAAGAAGTTTTAATAAGaaacaaaacatatatacaaactCCAACAAATGATGATAATCATGAAATGGAGCTCCATGAACAAGACGACCCTCTAACAAAGAGCTGTAAACTAAAAGAAGCtcttacaaaaaaccataaacaaGAACAAACGTATCAAATGCTATATGGGCCTGAAGATGCTTTAACAAATCAGAGTAAAAATGAAGCACCACAACATTATACATTACAAGTTCCATCTAAGACCCTGCAACCAGAAGAAACAAATCAGACAAACTTTACACAATTTGCTGAAAAAATCTTCAATAATATCACGGAAACATACGATTTAAATGGTAATACCGAGCAATTGGAAAGAATTGATGACAACTTATTACCAACAATATGTATGAATTATTATGAGAATGAGATTATTGAAGAATTGTTTCGAGAAATGGAAAATTACAGTGGCAGCGATGAAGATTGGTTGTACGTTGTGGAAAACTCTCTAAACGGCGATATTATggaagaaataataaatggtTATGAAAAACCGGAAGAGAATAACAACTTATTAGGCTTGGACTGCAAAACGATTGAAGAAAAGCAACTAATTGCTGAAACTACAGCTCAGTTGTATAAAAAACCCGAGGAACCTTgcgaaaaagaaagaaaagaaaagaataagAAAGAAACACAAGAATCCCAATTGCTTATTCAAAGAGAAAATTATGAAGAAGGCAGAGAAAATGTAGTTATTGCAGAAAAAGAACCAGACAAGCCATGCGCCACACATCCCCCTGACACTGTTCCTACAAAATACTTGTTGCATGAAAAATTGACACCCCATTACACCATTAAGCTTATAAATCTTTATAAGCAGGAACCTTGCTTGTGGAATGAGAGCCATAGCGACTTCTTTAGTCCTTTACCAACTAGAAAAGCCTGGCAGAATATAACTCATGAATGGAACAAGTTAAGTTCACGTAAATTTACCACAACCGATATACGCATCAAAATTTCCAATCTATGTCAAAGTTATCTGAAAGAGAGGGAACGTCTCTTGCAAAACGGCCAATTTAATGGTAATATAAAGTTTCAATATTATCATGAAATGTCATTTCTGGAAGAACAGCAATCCTTACAAAAGAGGCGTGAACTGTACGATCAGcagaatacaaaaattatagaaacTTATCGTTATTTTCCATTATTATGGCATCGAcgttattataaattaaagtaTACCAGCGAGAGGGAGAAAGCCTGGGAGTGCATCAGGTCCGCTTTGAAGTTATGCGGCTATAATGTATCGCGCTTCTTAATACAACAGCGGATACGATCGTTGCGTAAATGTTATCGTTTGGAAAAGATCCGTTTCTTGCATACTTTAGTACAGAATCAACCGTTTGAAGCGACTTTTAAGCACTACGAAGAAATGCAATTTCTCCATGAACACATTGATCCGTATCGTTGTGGCAATTGTAAGGGAATATTCGAAAATCTGTTGAATTATCGGTTTCACTTTAAGCGCTTGGATAAGAAATACAATTGCATTGAGGAGGATCAAGATTTGGGTGATGATGAGGAACGAGAAATTATGAAATTgcataaaaagaaattagaAGAACCACCAATGGCAACACCACTCCTccaacaagaagaagaacagCAACACCAAGCTCCACTTCAGGTCCAAGTTCAGGTGCAATACGCtgataatataattaatttacaaatacctTTGAGCGATGACAAAGACTCAACGTCTAGCCAGTTCAAagataaaaacaacaataaaacaaaaCCACCACCCACAGACTGTGATAATTCCTTTATCCGTTTAACTGAAACGGAAGCCCATCAATTAATAgctttatataaaagttttccaCAACTTTGGAATCCCAACCATTTAGATTATAATATCCGTTCAATGAAACAACAAAACTGGCAATCGTTGACCCGCCGCTTCAATGAATCAATGGGTAAAAAATATCGCTGTCATATAATATATCGTAAGATGAGTGATTATGTGAAATATTATAAGAAGGAAAAGTTACGTCTGGAAAATACCATAAAGGAGGAGAAGGAGAGAGAAGAGGGCAGCACACTGACAATGTGGGCATTATTTGAGGATTTTAAATTTCTTGATGATGTGCTCACCATTAACCAGGAATTGCAAAGATGTCTCCAACAAAAGGAAAACAGTTACAAAATAATCGAGTTGTACAAGTCACTGCCACAGTTATGGGATATTAATCATCCGGATTATAACAAACACACCAGCAAGCAACGCAACATACAAATAATGTGCCAACAATTGCAGCAACAATGTCAATTAAATTTAACACCCGAgcgtttaaaacaaaaactgaccGAGTTTAAGAGTCAATATCGCAAGGCTAGAGAACAACAGCCAGTAAAAGCATTGAAGGGTAAAAATTATAATGGACGACAATTTGAATTCTAtgagaatttaaaatttctggAGCAACATGTTGCACCATTCAATTGCAACGTATGCCACATGGAATTCAATGTGTACAAAGAGTTTAATAAACATCGGAGATCATCACAGTGTAGCAAAAAGATGGAAAGCGGTTTCCTCAAGTCTAGCCAAACGTTGGATAATGTTTGTGACATTTGTGGCTTAACATTTACGTTGCGTAGCAATCTGATGGTGCACTTGAAGCGGCACGAAGGCGTACGCAATTATCCATGTGCCCATTGTCCGAAACGATTTTTCAATTCGCATACGCTGAAGGTGCACGAGCGCTCTCACACCAAGGAAACACCGTTTACATGCGAAAAATGTGGCCATTCGTTTGTGGACAAAAGTAAATTGAATTTACACTTGAAACGTCACACCGAAATACGAGATTatttatgtgaatattgcCCGCGTGCTTTCTTCACCGCTCATGAACGAGATTATCATGTACGACGCCATTTAAATATACGCGATAAAGTGTGTAAAGTGTGTGGCAAAACGTTTGCTGCCGGTTCAGCATTATACGCTCACCTGATGTTACATAGTGAGGTGAAAAGATTCCAATGTGATAAATGCGAGTTGAAGTTTGCTCAATATTCTGGCTTATATAAGCATAAGAAGAAGcatcattaa
Protein Sequence: MLLHNLNNDVHSSAITRTTAITTATAADAVTSIKYNDHIKCGEVYTWWCEDVSYAIECHLCLDRPICPLTEYAQHMNVWHLKWENNNNKEEEEEDMLQQQEDGNGDADVTVTNESYTIQIACQATEEIQKSKCEMLNSDDADVAADVEEEENLDELHPQPFEQVLIEQDNSDLNDLYNLIDEQEEEKQEQEDGENSCNHVIREEQKDEEGVEEDDGQKQIQPTPTTTTTNPTKIQYEKLQNERQEEEDEEEQEKQLSNHLLNDLKIEQNLQKQIDAMKECYRKQHQQNMLNSVETINQYETRKSNEIVRNGKQSNQMIINGIGRQQPQQDNDHHVKEAGIDRNYKDINQNKSHNVEEQYSITPKEEAATKNHCPEGLLEEISTKKAKNEETSTKISQQKESPKRNMLQEDLLTKKGTNQEASSKKSVQGESLMKNDINKEASSKDSLQEETLTLALNKSIIQEASSKNCLEEKVLVKKYTNRDTLSKNDLQEEALMKKENVLQEKAIMKKGSIQAALSKKGLQEEGLLKKGTSQEASSKNSLQEETFKNKEMIGRLSNNNLQEEVLIRNKTYIQTPTNDDNHEMELHEQDDPLTKSCKLKEALTKNHKQEQTYQMLYGPEDALTNQSKNEAPQHYTLQVPSKTLQPEETNQTNFTQFAEKIFNNITETYDLNGNTEQLERIDDNLLPTICMNYYENEIIEELFREMENYSGSDEDWLYVVENSLNGDIMEEIINGYEKPEENNNLLGLDCKTIEEKQLIAETTAQLYKKPEEPCEKERKEKNKKETQESQLLIQRENYEEGRENVVIAEKEPDKPCATHPPDTVPTKYLLHEKLTPHYTIKLINLYKQEPCLWNESHSDFFSPLPTRKAWQNITHEWNKLSSRKFTTTDIRIKISNLCQSYLKERERLLQNGQFNGNIKFQYYHEMSFLEEQQSLQKRRELYDQQNTKIIETYRYFPLLWHRRYYKLKYTSEREKAWECIRSALKLCGYNVSRFLIQQRIRSLRKCYRLEKIRFLHTLVQNQPFEATFKHYEEMQFLHEHIDPYRCGNCKGIFENLLNYRFHFKRLDKKYNCIEEDQDLGDDEEREIMKLHKKKLEEPPMATPLLQQEEEQQHQAPLQVQVQVQYADNIINLQIPLSDDKDSTSSQFKDKNNNKTKPPPTDCDNSFIRLTETEAHQLIALYKSFPQLWNPNHLDYNIRSMKQQNWQSLTRRFNESMGKKYRCHIIYRKMSDYVKYYKKEKLRLENTIKEEKEREEGSTLTMWALFEDFKFLDDVLTINQELQRCLQQKENSYKIIELYKSLPQLWDINHPDYNKHTSKQRNIQIMCQQLQQQCQLNLTPERLKQKLTEFKSQYRKAREQQPVKALKGKNYNGRQFEFYENLKFLEQHVAPFNCNVCHMEFNVYKEFNKHRRSSQCSKKMESGFLKSSQTLDNVCDICGLTFTLRSNLMVHLKRHEGVRNYPCAHCPKRFFNSHTLKVHERSHTKETPFTCEKCGHSFVDKSKLNLHLKRHTEIRDYLCEYCPRAFFTAHERDYHVRRHLNIRDKVCKVCGKTFAAGSALYAHLMLHSEVKRFQCDKCELKFAQYSGLYKHKKKHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -