Basic Information

Insect: Ornithomya chloropus
Gene Symbol: -
Assembly: GCA_963971445.1
Location: OZ020530.1:53219771-53222638[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.018 1.5 9.8 4.4 1 23 395 417 395 417 0.99

2 8 3.2e-06 0.00027 21.6 0.8 1 23 422 444 422 444 0.98

3 8 2e-06 0.00016 22.3 0.6 2 23 453 474 453 474 0.97

4 8 5.7e-07 4.7e-05 24.0 0.4 1 23 480 502 480 502 0.99

5 8 1.7e-07 1.4e-05 25.6 4.1 1 23 508 530 508 530 0.98

6 8 4.4e-07 3.6e-05 24.3 1.9 1 23 536 558 536 558 0.98

7 8 3.9e-06 0.00033 21.3 4.8 1 23 564 586 564 586 0.97

8 8 0.00044 0.036 14.9 1.1 1 21 592 614 592 615 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.018	1.5	9.8	4.4	1	23	395	417	395	417	0.99
2	8	3.2e-06	0.00027	21.6	0.8	1	23	422	444	422	444	0.98
3	8	2e-06	0.00016	22.3	0.6	2	23	453	474	453	474	0.97
4	8	5.7e-07	4.7e-05	24.0	0.4	1	23	480	502	480	502	0.99
5	8	1.7e-07	1.4e-05	25.6	4.1	1	23	508	530	508	530	0.98
6	8	4.4e-07	3.6e-05	24.3	1.9	1	23	536	558	536	558	0.98
7	8	3.9e-06	0.00033	21.3	4.8	1	23	564	586	564	586	0.97
8	8	0.00044	0.036	14.9	1.1	1	21	592	614	592	615	0.94

Sequence Information

Coding Sequence: ATGAATGATTTGAAAATGGGTTGCAAGCATAATCTGTTGCAACGCTTAGAAATGGCCATGCCTTACCGGCCACAATCCACCGAACAGAATCCTAGTGAAACAAATGCTACTCATGTAACGGACTTTAGTATACAAAGAATTTTGGGTGAAACCAAGACAGCAGACGCCACCATACCCGCACAgaatattgaaatgaaaaaatcaaaaaattcaTCTCCCTTTGAAATaataataccaacaacaacagcaagaacaacaacaacaatatccaATAAATTATCATCCACAATACCATCTGcgacaaccacaacaacaacaagcgcAACTTCACAATTCCAAGTTATACAGCCGTTAGCGAAAAAAGCTTTAAACACTTCAGATATTTTGGATTTATCTACAAATAAATCATCTCAATATCCTTACAGTGTCACAACAGCCACAACAGCCATACTACCGATCAatcattacaattacaataattatccCGCACGCTTGCCGTACGACAGCCTATATCCCGGAGTGTTGGCCGCTATGGCGGCCGTAAATgctcaaaaattttattcacaaTTTCTGCCACACATGTTTGCCGCCGGCTTTTACAATACCAATGctaaccacaacaacaataataataataatcgttTACCATCAGTAATCCCTTCCCATTATACTAAACGTTACTTTGCTCCTTACATAATAAATCCCCCCACCCCTCAAAGGACAACAATCGCACCACCAATTCCAGCGATAAGCCCAACACAACAACGAGAAACGAATTTGTTGTCTACGTCCGGTAGAAtcaataatagtaataaattttcttgtACTCGATCCGATTGCTTGGAATGtttgaatatatattataaaaatgttgcttcaTTGAATGTACaccagcagcaacagcagcaacagcagcagcaacaacaggtTTCCTTTAAAACGTCAATAGCTTTACGGACTAGCACGGCCATTAATAGTACAGCTACGGGTTTATATCACATCAAAAGTAAAGCGTGCAAGGAGGCGACGGCGGCGTTATTCTCACCATCATCAGTAACGAGTAAAATATCTGCgctaaatacaacaacaatcaacatTCCACTAGATAATGGTACCAAAATGGCGGGCAGTATATTGTTTAGTCCATCAATGGCTATGTCCCCGAATTCAGAAGAGATTAGTTATAAATGTTGCATTTGCGAGAAAGTATTCGGATGTTCACAAACTCTACAGgCCCACGAAAAGACCCACAAATCACCACGTTACGAATGTTCAGATTGTGGCAAAGGATTCTCCCAATTACGCAACTATAAATATCATTTATCCGTGCATCGGGGTACCAAAGAATTTGCTGCCGAATGCCCGGAATGCCGTAAAACATTTAATGATAAAGGTTACCTTAGCAGTCACATGAAAATACATCGCAACAAGAAAGAATATCAATGTCCGTATTGTCCCAAATCATTCAATCAACGTGTAGCCTTCAATATGCATGTACGGATTCACACCGGCGTTAAGCCGCACAAGTGCGTCGAGTGCGGTAAACGCTTCTCCCGTAAAATGCTATTGAAACAGCACATGCGTACGCACAGTGGCGAGAAGCCGTATCAATGTTCGGTATGCGGGAAATCATTTGCCGATCGCAGTAACATGACGCTGCATCATCGTTTGCATTCGGGTATTAAACCGTTCAATTGTCCGATTTGCCCGAAGGCGTTCACCAAGAAGCATCACTTGAAAACGCATCTGAACTATCATACGGGTTGCAAGCCGTATGTGTGCCCGCATCCCAATTGTCATCAGGCTTTTACCCAATCGAGTAATATGCGGACGCATGCCAAGAAATGTCAATATCGACGATTACAGTTAACATATCCGGCGGTGAGCATAGCAACGCCAGCAGTAGAGGCAatggcagcagcagcaacagcagcaaaagGTACCTTATTTACTTCATTTAGTAATAGTTCAGCAACGTCAGCAACACAATCGCCATCAATGATCATTAGCGGTAATTTGACGATGGTGCAACCATCCAACGTAACAGTACCTGGTTTAGCGGTCACCACCACAGCAATTAATAGTCTTTTCCAGAGCAACAATAACGGTGGtggtagcaacaacaacaacattccaACGACGACATTAACGGCCGGTATTCGGATGTTAAACACAATCGCTTCAGTTTCGCCGTCAGCCTCAACTTTTTCAACATCTATACCATTTCCGCCTTCCCAACAGCCTTTGTTATCCACATTGCGACCGTTTTAA
Protein Sequence: MNDLKMGCKHNLLQRLEMAMPYRPQSTEQNPSETNATHVTDFSIQRILGETKTADATIPAQNIEMKKSKNSSPFEIIIPTTTARTTTTISNKLSSTIPSATTTTTTSATSQFQVIQPLAKKALNTSDILDLSTNKSSQYPYSVTTATTAILPINHYNYNNYPARLPYDSLYPGVLAAMAAVNAQKFYSQFLPHMFAAGFYNTNANHNNNNNNNRLPSVIPSHYTKRYFAPYIINPPTPQRTTIAPPIPAISPTQQRETNLLSTSGRINNSNKFSCTRSDCLECLNIYYKNVASLNVHQQQQQQQQQQQQVSFKTSIALRTSTAINSTATGLYHIKSKACKEATAALFSPSSVTSKISALNTTTINIPLDNGTKMAGSILFSPSMAMSPNSEEISYKCCICEKVFGCSQTLQAHEKTHKSPRYECSDCGKGFSQLRNYKYHLSVHRGTKEFAAECPECRKTFNDKGYLSSHMKIHRNKKEYQCPYCPKSFNQRVAFNMHVRIHTGVKPHKCVECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFNCPICPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCHQAFTQSSNMRTHAKKCQYRRLQLTYPAVSIATPAVEAMAAAATAAKGTLFTSFSNSSATSATQSPSMIISGNLTMVQPSNVTVPGLAVTTTAINSLFQSNNNGGGSNNNNIPTTTLTAGIRMLNTIASVSPSASTFSTSIPFPPSQQPLLSTLRPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01115170;
90% Identity: -
80% Identity: -