Basic Information

Insect: Ornithomya chloropus
Gene Symbol: -
Assembly: GCA_963971445.1
Location: OZ020531.1:17816650-17828295[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.1 8.6 7.4 0.8 1 21 57 77 57 78 0.91

2 18 0.026 2.1 9.3 6.5 5 23 92 110 84 110 0.92

3 18 0.0003 0.025 15.4 5.6 1 23 242 264 242 264 0.98

4 18 0.27 22 6.1 0.4 1 10 270 279 270 282 0.93

5 18 3.9e-05 0.0032 18.2 0.5 1 23 286 308 286 308 0.97

6 18 6.4e-06 0.00053 20.7 0.2 1 23 314 336 314 336 0.98

7 18 0.02 1.6 9.7 0.1 1 21 341 361 341 361 0.95

8 18 0.0027 0.22 12.4 0.1 6 23 362 380 361 380 0.97

9 18 0.026 2.1 9.3 6.5 5 23 566 584 558 584 0.92

10 18 0.00035 0.029 15.2 3.4 1 23 779 801 779 801 0.98

11 18 0.0018 0.15 13.0 10.5 1 23 807 829 807 829 0.96

12 18 0.0003 0.025 15.4 5.6 1 23 835 857 835 857 0.98

13 18 0.27 22 6.1 0.4 1 10 863 872 863 875 0.93

14 18 3.9e-05 0.0032 18.2 0.5 1 23 879 901 879 901 0.97

15 18 6.4e-06 0.00053 20.7 0.2 1 23 907 929 907 929 0.98

16 18 0.0024 0.2 12.6 0.7 1 21 934 954 934 954 0.96

17 18 0.0047 0.39 11.7 0.3 6 23 955 973 955 973 0.98

18 18 0.0056 0.46 11.4 0.3 3 23 1058 1078 1056 1078 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.1	8.6	7.4	0.8	1	21	57	77	57	78	0.91
2	18	0.026	2.1	9.3	6.5	5	23	92	110	84	110	0.92
3	18	0.0003	0.025	15.4	5.6	1	23	242	264	242	264	0.98
4	18	0.27	22	6.1	0.4	1	10	270	279	270	282	0.93
5	18	3.9e-05	0.0032	18.2	0.5	1	23	286	308	286	308	0.97
6	18	6.4e-06	0.00053	20.7	0.2	1	23	314	336	314	336	0.98
7	18	0.02	1.6	9.7	0.1	1	21	341	361	341	361	0.95
8	18	0.0027	0.22	12.4	0.1	6	23	362	380	361	380	0.97
9	18	0.026	2.1	9.3	6.5	5	23	566	584	558	584	0.92
10	18	0.00035	0.029	15.2	3.4	1	23	779	801	779	801	0.98
11	18	0.0018	0.15	13.0	10.5	1	23	807	829	807	829	0.96
12	18	0.0003	0.025	15.4	5.6	1	23	835	857	835	857	0.98
13	18	0.27	22	6.1	0.4	1	10	863	872	863	875	0.93
14	18	3.9e-05	0.0032	18.2	0.5	1	23	879	901	879	901	0.97
15	18	6.4e-06	0.00053	20.7	0.2	1	23	907	929	907	929	0.98
16	18	0.0024	0.2	12.6	0.7	1	21	934	954	934	954	0.96
17	18	0.0047	0.39	11.7	0.3	6	23	955	973	955	973	0.98
18	18	0.0056	0.46	11.4	0.3	3	23	1058	1078	1056	1078	0.97

Sequence Information

Coding Sequence: ATGCCAGTTCAAATCATATCATCGACCGGTCAGGTTATGTCGCAAACAACTTTAGTGCAGGCCGCCGCCACAACAAATCCCCATTCAGTGGTTGCTGCTGTGCCCGCTGGCGTCACCcaggcGGCTGCACCGCAACATCAACAGCAGGCTCAGAATAAACCGAAGTCACATTTTTGTGCCAGTTGTGGTAAAGGATTTGCCGCCAAACATGGCCTCATGCAGCATAATCGCCGTCAACCGAACGGTGGCTGCACCGTACACACTCACGTGTGCGAGTGTGGCAAAGCGTTCtttcaaaagaatcatttaatGTTGCATCAGCGCCAACATTTGGatacaaaatcaaatatacaacagcaaacgcaacagcaacaacaacagcagcagcagcagcaacaacagATGCCTTATCTGTTATCAACGGATGGCTCATTAACGGTACAGAAAGATGTAAAAGGTGCTGTGGCGGCCAATAAAGGCGATATATTAGCTGGTATCTCAGTGCAAGTGCAAAAAGTCATACAGGGCTTGGAGGATAATGACGAATCACAGGCGGCTGCTCCCAATTTGAAACTAGAACCGGGTACTTTGGAAATATCACCGAAAAATGAACTTCAagataatattaatttcaatgaGGTGAACGTCCCCACATATGCACCCACTGTGGCTCACAAGCATTGCCTCAACACACATTTGCTGTTGCACTCCACCGATCGTCGGTATCAGTGTGTTGAGTGCAAGAAAAGTTTCACCTTGAAACATCATTTGTTGACACATTCACGTGTCCATTCACGCGATCGTCCCTTTGTATGTCAAGAATGCGGACGGACATTTCATGCTGGCGAACGACCCTACGTGTGCGAAGAGTGCGGTGAAAGTTTCGCCCAAGAGAATCATCTTATTATGCATTCACGATTCCATGGCTCAATTAATCCGTTTGTATGCCAAGACTGTGGTGTGACATTTCCCCGCAAGTTTCAACTGGTCAATCATGCACGCATTCATGGCAAAATACCTCATTCATGCACTGTTTGCGGCAAAGAGTTCTTACAGATACGCACTTTAGTATCGCACATGCgTTGCGGTGAAGGCTTTATGACCAAGGCCGATTTGAATCATCACATACGCAGCACACATGGTGGAATTAATCCAAATTCTTCGACTACGGCCATAGTATCAAGCAATCCCATGATTAGTGCTCATCAAAATACCCAAACTATACAGACTCAGgcacagcaacagcagcaacaacaacatcaacaacagcagcaacaacaacaccagaaTCATCCACAAACCATAACCGTGGTCAGTAATCCGAATAGTTCGACACTATTAACAGTAACCGCAAACGATCCGAACAGACCTCAGTATAGTTGTCGCTTGCAGCCGGGCGGTACAATGGTGGTGGCCACCAATCCCAGCATTATAGCCCAAAATCAAATGCCAGTTCAAATCATATCATCGACCGGTCAGGTTATGTCGCAAACAACTTTAGTGCAGGCCGCCGCCACAACAAATCCCCATTCAGTGGTTGCTGCTGTGCCCGCTGGCGTCACCGTACAGCCCACACATCAACAGCATCAGCATGCCGCTCAACAGTTGGCAAATGGATTTGCCGCCAAACATGGCCTCATGCAGCATAATCGCCGTCATCCCAACGGTGGCTGCACCGTACACACTCACGTGTGCGAGTGTGGCAAAGCGTTCtttcaaaagaatcatttaatGTTGCATCAGCGCCAACATTTGGatacaaaatcaaatatacaacagcaaacgcaacagcaacaacaacagcagcagcagcagcaacaacagcaacaacagATGCCTTATCTGTTATCAACGGATGGCTCATTAACGGTACAGAAAGATGTAAAAGGTGCTGTGGCGGCCAATAAAGGTGTGGTTCGTCGCATGGTATTAGTAAATGATCCATTTACCACCGGAGCCCAAAGaGTTATTACTGGAGCCGCTGCTGCCACCTCCAGTGTTGTGAAGAAGCCGGATCAACAGCAGGTGTTGATTCTTAATTGTGACAAAAATTGTAAGCTCTCGTCCTCTTTACTATTTACAGTTACCCGTTTGTGTGTTGTGGATCCCAAGGCCCCTACGACATTAACAGCAACTGGCGCAGGCGATATATTAGCTGGTATCTCAGTGCAAGTGCAAAAAGTCATACAGGGCTTGGAGGATAATGACGAATCACAGGCGGCTGCTCCCAATTTGAAACTAGAACCGGGTACTTTGGAAATATCACCGAAAAATGAACTTCAagataatattaatttcaatgaGGGTGTTGCTACGATTAAGAAAGAACGTCCCTACAGCTGTGAGGAGTGCGGTAAATCGTTTCTGTTAAAACATCATTTGACCACGCATGCCCGTGTTCATACCGGTGAACGTCCCCACATATGCACCCACTGTGGCAAAAGCTTCGCTCACAAGCATTGCCTCAACACACATTTGCTGTTGCACTCCACCGATCGTCGGTATCAGTGTGTTGAGTGCAAGAAAAGTTTCACCTTGAAACATCATTTGTTGACACATTCACGTGTCCATTCACGCGATCGTCCCTTTGTATGTCAAGAATGCGGACGGACATTTCATGCTGGCGAACGACCCTACGTGTGCGAAGAGTGCGGTGAAAGTTTCGCCCAAGAGAATCATCTTATTATGCATTCACGATTCCATGGCTCAATTAATCCGTTTGTATGCCAAGACTGTGGTGTGACATTTCCCCGCAAGTTTCAACTGGTCAATCATGCACGCATTCATGGCAAAATACCTCATTCATGCACTGTTTGCGGCAAAGAGTTCTTACAGAAACGCACTTTAGTATCGCACATGCgTTGCGGTGAAGGCTTTATGACCAAGGCCGATTTGAATCATCACATACGCAGCACACATGGTGGAATTAATCCAAATTCTTCGACTACGGCCATAGTATCAAGCAATCCCATGATTAGTGCTCAGCAAAATACCCAAACTATACAGCAAGTACATCAGACTCAGgcacagcaacagcagcaacaacaacatcaacaacagcagcaacaacaacaccagaaTCATCCACAAACCATAACCGTGGTCAGTAATCCGAATAGTTCGACACTATTAACAGTAACCGCAAACGATCCGAACAGACCTCAGTATGGTTGTCGTGAATGTGGAAGTGCCTTCAATAGTCGCGAAACATTCGCTTTACATCAACGTTTGCATACAGGCGATAAAAATCTTATGACCGATTTGTGTGCATTGCGGCCAGCTTGCAGCCGGGCGGTACAATGGTGGTGGCCACCAATCCCAGCATTATAG
Protein Sequence: MPVQIISSTGQVMSQTTLVQAAATTNPHSVVAAVPAGVTQAAAPQHQQQAQNKPKSHFCASCGKGFAAKHGLMQHNRRQPNGGCTVHTHVCECGKAFFQKNHLMLHQRQHLDTKSNIQQQTQQQQQQQQQQQQQMPYLLSTDGSLTVQKDVKGAVAANKGDILAGISVQVQKVIQGLEDNDESQAAAPNLKLEPGTLEISPKNELQDNINFNEVNVPTYAPTVAHKHCLNTHLLLHSTDRRYQCVECKKSFTLKHHLLTHSRVHSRDRPFVCQECGRTFHAGERPYVCEECGESFAQENHLIMHSRFHGSINPFVCQDCGVTFPRKFQLVNHARIHGKIPHSCTVCGKEFLQIRTLVSHMRCGEGFMTKADLNHHIRSTHGGINPNSSTTAIVSSNPMISAHQNTQTIQTQAQQQQQQQHQQQQQQQHQNHPQTITVVSNPNSSTLLTVTANDPNRPQYSCRLQPGGTMVVATNPSIIAQNQMPVQIISSTGQVMSQTTLVQAAATTNPHSVVAAVPAGVTVQPTHQQHQHAAQQLANGFAAKHGLMQHNRRHPNGGCTVHTHVCECGKAFFQKNHLMLHQRQHLDTKSNIQQQTQQQQQQQQQQQQQQQQMPYLLSTDGSLTVQKDVKGAVAANKGVVRRMVLVNDPFTTGAQRVITGAAAATSSVVKKPDQQQVLILNCDKNCKLSSSLLFTVTRLCVVDPKAPTTLTATGAGDILAGISVQVQKVIQGLEDNDESQAAAPNLKLEPGTLEISPKNELQDNINFNEGVATIKKERPYSCEECGKSFLLKHHLTTHARVHTGERPHICTHCGKSFAHKHCLNTHLLLHSTDRRYQCVECKKSFTLKHHLLTHSRVHSRDRPFVCQECGRTFHAGERPYVCEECGESFAQENHLIMHSRFHGSINPFVCQDCGVTFPRKFQLVNHARIHGKIPHSCTVCGKEFLQKRTLVSHMRCGEGFMTKADLNHHIRSTHGGINPNSSTTAIVSSNPMISAQQNTQTIQQVHQTQAQQQQQQQHQQQQQQQHQNHPQTITVVSNPNSSTLLTVTANDPNRPQYGCRECGSAFNSRETFALHQRLHTGDKNLMTDLCALRPACSRAVQWWWPPIPAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -