Basic Information

Insect: Ornithomya chloropus
Gene Symbol: HINFP_1
Assembly: GCA_963971445.1
Location: OZ020530.1:53784962-53793582[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0022 0.19 12.7 1.9 2 23 228 250 227 250 0.95

2 16 0.0018 0.15 13.0 1.2 3 23 261 281 259 281 0.97

3 16 8e-05 0.0066 17.2 1.2 2 23 284 306 283 306 0.94

4 16 2.1e-06 0.00017 22.2 0.3 1 23 312 334 312 334 0.96

5 16 1.7e-05 0.0014 19.3 1.3 1 23 340 362 340 362 0.99

6 16 0.0013 0.11 13.4 0.2 1 23 367 389 367 389 0.97

7 16 3.3e-06 0.00027 21.6 2.2 1 23 395 417 395 417 0.97

8 16 0.17 14 6.8 5.0 1 23 423 446 423 446 0.96

9 16 0.0029 0.24 12.3 2.0 3 23 898 919 897 919 0.97

10 16 0.00036 0.03 15.2 0.7 3 23 930 950 928 950 0.97

11 16 4.4e-05 0.0036 18.1 1.2 2 23 953 975 952 975 0.93

12 16 3.9e-06 0.00032 21.4 1.0 1 23 981 1003 981 1003 0.98

13 16 0.00017 0.014 16.2 5.9 1 23 1009 1031 1009 1031 0.97

14 16 0.0013 0.11 13.4 0.6 1 23 1036 1058 1036 1058 0.98

15 16 2.2e-06 0.00018 22.2 1.4 1 23 1064 1086 1064 1086 0.97

16 16 0.024 2 9.4 3.8 1 23 1092 1115 1092 1115 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0022	0.19	12.7	1.9	2	23	228	250	227	250	0.95
2	16	0.0018	0.15	13.0	1.2	3	23	261	281	259	281	0.97
3	16	8e-05	0.0066	17.2	1.2	2	23	284	306	283	306	0.94
4	16	2.1e-06	0.00017	22.2	0.3	1	23	312	334	312	334	0.96
5	16	1.7e-05	0.0014	19.3	1.3	1	23	340	362	340	362	0.99
6	16	0.0013	0.11	13.4	0.2	1	23	367	389	367	389	0.97
7	16	3.3e-06	0.00027	21.6	2.2	1	23	395	417	395	417	0.97
8	16	0.17	14	6.8	5.0	1	23	423	446	423	446	0.96
9	16	0.0029	0.24	12.3	2.0	3	23	898	919	897	919	0.97
10	16	0.00036	0.03	15.2	0.7	3	23	930	950	928	950	0.97
11	16	4.4e-05	0.0036	18.1	1.2	2	23	953	975	952	975	0.93
12	16	3.9e-06	0.00032	21.4	1.0	1	23	981	1003	981	1003	0.98
13	16	0.00017	0.014	16.2	5.9	1	23	1009	1031	1009	1031	0.97
14	16	0.0013	0.11	13.4	0.6	1	23	1036	1058	1036	1058	0.98
15	16	2.2e-06	0.00018	22.2	1.4	1	23	1064	1086	1064	1086	0.97
16	16	0.024	2	9.4	3.8	1	23	1092	1115	1092	1115	0.97

Sequence Information

Coding Sequence: ATGCAATCTGCAAAAACAAGAAGTCCCTCTACTGACActattaatgaaatatattggcATTCGTGGTGTCGGCTATGTGGCAGCCAAGACACCGAtaatgccacaaaaatatccTTCGAAACAGGACGCAAATTATCCTTATATCAGAATTTCATACCAAGTAAAACTATAGAGAAATACTTTGAAATAAATATTACACCAGATGATATGTACCCCACGGCAATATGTGTTGAATGTTATACCTTCACGCAATCGATAATTCAGTTTACTGAACGTGTAGCTGAAGTACAAGGAATCTTTGATGCACTAATAAGTGGCAATAGATATGGAACAAGTGATAACATTGCACAAGCCTTGCCCAAGTTAGATTTAGTGAAGGCCAAGTCCGATATTTTCGAACATCACGTTAGCCCTGCTGTAGTTAAAGGAGAACCTGGGGAATCTGTGGATAGTAAAGAAGACAGGATCTTCATAAATGATGCGGAAACGGAATGCATTGTGGAGGCTGCCAACGACAACAGACATATCGATGAAAATGAAGAAGATCCTTTCGCTAAAATAGATGATGTTAAATCAAGTGAACTAAAATCGAAGGTCAGGGTTTATAAAAGAAGATGCTGCAAATTAAGAGAAGTGAGGGTGAAACAGAAAAGAAAGGATCACAACGCGAAAGAAAATCTCAATTGCAGAAAGTGCGATGAGTCTTTTCCATCATTTGCCTTGTATTGCAATCATATGCGAAATGAGCATGCTGTAAAGGAGAAATCGAAAAATTGGGACTGCCCCAAATGTAGTAAAGTAGTCTATAGCAGCCTGCACTTGGAACGCCACTTTCAAACTCATACTGTACCATGCCCCAAATGTGAGAAATGCTTCTCCACCGACAATCAATTAATGGCGCATATAAAGTTTCAACATACAAACGAAAAACCTTTCCTCTGTGAAGAGTGTGGCGCTGATTTTCGCTCGAGCAGTAATCTAAACTCACATATACAAACGCATAAtgataaatctttatatgagTGTGAAGTGTGtgaaaaaaaactgaaaagtcGTCAGACACTAAAGAGACATATGGAAACACATGGTAATCAAGAGTTTATCTGCCTTCAATGTGGCTTGAAATTAAGTTCAAGTGTGACGCTGAACCGCCATTTATTGGTGCACTCTGATAAAATGCAGCACAAGTGTGATTATTGTGGGCGAGCATTCAAAAGAGCTAAAACGTTAAAGAATCATTTAATTTTACATACTGGACTCAAACTGTACGATTGTGATTTCTGTGAGCGTACCTTTACCAATGGTTCCAATTGCCGGACgcacaaaaagaaaatgcatCCAACAGAGTTGGCTGCCTGGGAGGCAGCCGGTGCTAAAACAGTTACTAAGAACATACCAAAgcttgaaattttaaaaaccctaaCAAAAACGTCGGATAATTTGTTACCGGTGGTTACAAAACAAAGTGGTTCTTTTGCGTTTAGCACGAAATCGAAATCTCATAAATCTCTACCTTACAACACAATCAAACATTCAGAAGCGCAACGTGAAAATTCGACACCAGGGCCCGATGGCATCCCAAATAAAGCTCTGAAGGCTATGATTGAGGAGAGACTTATCTGTCGAAACCTACCAGAAGTGCCTGGAGGATGGTACCTTTCCAAAATGCTGGAAACGACAAACCCTAGTGCTAATACCAAAAGGCGGACCCAAGCCTGCAAAGAGGGCCTTGCTCGCAAACGTCGTTGCCTCAAGGCTTCTCTATGCAAGCCCTGTTTGGGCTCAATGCTTAAAAATCAAACAGCTCAAGCAAAAAACGCAGCAAACGTTATAGCTGGATCCATACCATGGTACATCCTAGCAGACGAAATGAAGCGCATTTTTATTAGGAAGGCTAACTCCTCTCAATCTGCGAAGTCTATAAAAATGGAAGAACGGCAAGTCTCCCTTAACCACTGGCAGAATAAATGGGACTCATCATCGAAAGGAAGAATAGAACGTTTAGAACGAAGGGCTTTGGCTATGgctaacaataataaaatgcaGTGGCAGTCATGGTGTCGTCTATGTGCCAGCCAAGACACCGATAATACCACAAAAATATCCTTAGAAACAGGCAAATTATCCTTATATCAGAATTTCATACCAAGTAAGACTATAGAGAAATACTTTGAAATAAATATTACACCAGATGATATGTACCCCACGGCAATATGTGTTGAATGTTATACCTTCACGCAATCGATAATACAGTTTACTGAGCGTGTAGCTAAGGTACAAAAAATCTATGATACGTTGATATGTGAGGAGAGATTTGAAACACGTGATAACGTTGCACAAGCCTTGGCTAAGCTAGAATTGCTGAAAGCCAAGCCAGATAATTTAGAACATTGCGTCAGTCCAGTCGTGATTAAAGTAGAGCCCGCCGAATCTGTGGATGTCAAAGAACACAGCATCTTCATAAATGACGTAGAGGCTGAATGCATTGATGAGGCTTTTGACGATGACGGACGTTTAGATGAAAATGAAGTGGATCCCTTTAGTAAAATCGATGATATAGAAGCATCTGAACCAACCATTAAAGACAAAGACAAAGTGTACAAAAGGAAGCGTTTCAAAGCCAAGGAGATAAAGTGTAAACGTAAAAAATTGGCAGAAAATGAGGAGCAAAATATAAACCAAAAGGTCGATTGCAAACACTGCGGGGAATCCTTTCAATTGTTGCGCCAGTATTTCAACCATATGAAAATTGAACACGGTATAGAGGAAACGTCCAAAAATTGGGACTGCCCCAAATGTGACAAAGTTGTTAGCAGCGTTCATCGCTTGAAAAGCCATATCCAAACTCATGCTATACCCTGCTCTGAATGTGAAAAATGCTTCTCCAACAATAATCAGCTGGAGGCTCACGTGAAATTTCAACATCAAAACGAAAGAGCGTTTGTTTGTGAAGAGTGCGGAACCTGTCTACGTACCAGAGGCAATCTGAAAATACACATGGACACGCACACCAATAATGCAGCACATGAGTGTGAAGTGTGTAAGAAAAAGTTCAAAAACCGTCATGCCCTTAAGaGACATTCGGAAACACACAGTAGCCGAAAGTACATATGCTCTCAGTGTGGCTTCCAATTGAATTCACGTACCACCTTAAATCGCCATCTCTTGGTGCACTCGGAGGAAATGCAGCACAAGTGTGATTATTGTGGCCGAGCTTTCAAAAGAGCCAAAGCTCTAAAAAATCACTTAATCTTGCATACTGGACTCAAACCGTACGTTTGCGATTTCTGCGATCGTACTTTTGCCAACGGCTCCAATTGTCGTACgcacaaaaagaaaatgcatCCCGAAGAATTGGCTGCCTTGGAGGCAGCAGGTAACaaacaatttaccaaaaacatACCAAAACTGGAGATACTAAAAGCTGTAACGAAAAGTTCCGATAATTTGACACCAGTGGTTACAAAACAAAGCGGTTGTTTTGCTTTTGGCCCCAAATCCACATCGAGCAAATCCATGAAGTGGAACACAAAATCAAGCATTAACAATCTCTTGGCAATGGATGATGATTCTAAAAAAACCTCAAATATTACTGAGAATAGTACGCAATTGGACACGGACGATATTACCAAGGATGagtgtataaataattaa
Protein Sequence: MQSAKTRSPSTDTINEIYWHSWCRLCGSQDTDNATKISFETGRKLSLYQNFIPSKTIEKYFEINITPDDMYPTAICVECYTFTQSIIQFTERVAEVQGIFDALISGNRYGTSDNIAQALPKLDLVKAKSDIFEHHVSPAVVKGEPGESVDSKEDRIFINDAETECIVEAANDNRHIDENEEDPFAKIDDVKSSELKSKVRVYKRRCCKLREVRVKQKRKDHNAKENLNCRKCDESFPSFALYCNHMRNEHAVKEKSKNWDCPKCSKVVYSSLHLERHFQTHTVPCPKCEKCFSTDNQLMAHIKFQHTNEKPFLCEECGADFRSSSNLNSHIQTHNDKSLYECEVCEKKLKSRQTLKRHMETHGNQEFICLQCGLKLSSSVTLNRHLLVHSDKMQHKCDYCGRAFKRAKTLKNHLILHTGLKLYDCDFCERTFTNGSNCRTHKKKMHPTELAAWEAAGAKTVTKNIPKLEILKTLTKTSDNLLPVVTKQSGSFAFSTKSKSHKSLPYNTIKHSEAQRENSTPGPDGIPNKALKAMIEERLICRNLPEVPGGWYLSKMLETTNPSANTKRRTQACKEGLARKRRCLKASLCKPCLGSMLKNQTAQAKNAANVIAGSIPWYILADEMKRIFIRKANSSQSAKSIKMEERQVSLNHWQNKWDSSSKGRIERLERRALAMANNNKMQWQSWCRLCASQDTDNTTKISLETGKLSLYQNFIPSKTIEKYFEINITPDDMYPTAICVECYTFTQSIIQFTERVAKVQKIYDTLICEERFETRDNVAQALAKLELLKAKPDNLEHCVSPVVIKVEPAESVDVKEHSIFINDVEAECIDEAFDDDGRLDENEVDPFSKIDDIEASEPTIKDKDKVYKRKRFKAKEIKCKRKKLAENEEQNINQKVDCKHCGESFQLLRQYFNHMKIEHGIEETSKNWDCPKCDKVVSSVHRLKSHIQTHAIPCSECEKCFSNNNQLEAHVKFQHQNERAFVCEECGTCLRTRGNLKIHMDTHTNNAAHECEVCKKKFKNRHALKRHSETHSSRKYICSQCGFQLNSRTTLNRHLLVHSEEMQHKCDYCGRAFKRAKALKNHLILHTGLKPYVCDFCDRTFANGSNCRTHKKKMHPEELAALEAAGNKQFTKNIPKLEILKAVTKSSDNLTPVVTKQSGCFAFGPKSTSSKSMKWNTKSSINNLLAMDDDSKKTSNITENSTQLDTDDITKDECINN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -