Ochl020345.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ornithomya chloropus
Gene Symbol
JARID2
Assembly
GCA_963971445.1
Location
OZ020532.1:26370152-26379013[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6e-22 2e-18 66.9 0.0 7 89 2010 2090 2005 2090 0.92

Sequence Information

Coding Sequence
ATGGTGGTCTCCAAAGACTCGAAGCGTAAACGTAAGGAGTCTTCGACACCtacgcaacaacaacaacaacaatcgtCATCTACAATAGAGTCATCACCAGAAATGCCCAAAAGAAACAAGGTACAAGCGCAGCGTAAGTTTGCTCAAGGCCAAAGTGCTCCCCAATCATCGTATAGTTCGATAATAGCGTCCTCATCATCCAACACGGGACCGAGCACATCGTCTGAGAGCCGTGAGCCGCCTACCGAAATACTACCGAACAAAAGACCAAAGACCGAagattttttaacatttctaTGCTTTCGCGGTACATCAGCATTACCGCCACATTTAGATTTTCTGAATCAAGGTCGTTCCCGAGAGCCCCCGAGGCCGGTTAGAAAGTCACCCAACAAGCGCGTTAATAAAAAGggtaaaaaaaccaaaagctCCCCAACCAAAACTGTTAAAAATCAAAACTATGCAACTGATACCAAGCAGAATAATGAAACACACGAAGACAGCAATGACGGTGATGAGGATGAGAAAACTGAAAATATAAAGGGCAATAATGCAATCGATCAGGCGGGTGTAGAAGTGCAAAACAAAGAAGCGAAGAACCCAACAACTTGTGATGAGGTGCCAACATATGCGGTACGCAAACGAGCCGATATTGTAGTTGAAGGTAATCGTCGCAACAATACAAGTAACAATAAGGAGTTAGACAAGTGCAGCAACAGTACCGAGTGTAATGTTACAAAACGGTCCAGTCGTTCCATGGTACGTGACGCTAGAGTTATTTTAAATCCTCTACCCAAAATTGAAGCGGATCATCCCATACCATCTACTTCAGTGCAACAAGTAGCAAGTAAAACCGTACATGCTCAAAATGATActaatgaacaacaacaacaagttacTGGGATTAGTAAGACTTGCTTAAAGACTGATCGAAAATCGGAGACACCATCTAAGGAAAGTGAATTCACCACAGATAGGTCCCGTAAGGGTAATCGGAAGAAGGATtcagaaataaaaaatgtccCAGTAAAGGAGATaccatcaaaaactgaaattaGAGATGTAAAAATCCCGATTAAGAGGTCGAGACAAAAGGAATCAcccatttttataccatcaCCAGAGCCTTCAGGGCGTATGACACGGCAAAGAGCATTCTTTGAACCGGTTAAAGTGCTCCCCAAAGAGGtcaaacaacaacacttaGCCAACGCTAATGAAAAATCATCAGAACAATCTGTAAAAGGGtctgaaattaatttaactgATGAACATAAGAACAAAGACGAAAGTGTTTCTAACAAGAAAGTCGAACCAAAACCTTTGAATGTTAAGAAAGAAGTTAACGACACAAAAAAAAGCACTCTTAAGAGCAATAATGTTGATGTGAATAAATTGAAGAGCGATTTAAATGTATTTGATTTTTCATCCGATGATGAACAACCCTTGGCCAAAGCTATGAAGTTTAAAAAAGGTGGTGGTGGTCGTTCTAAAAAGATCGCTCAGCGAGGTAATAAAAAGTCTAGTGGcaataaaataatagaaaaagctGAAGCGAAGGCGAAAGAAAAAGGAGAAGtatcaacaaaacaaaatgaaatcaGCACAAAAGCACCCGAAGTGGAACGAAAGGAGGAACTGttatcatcaacaacaattaaaggTAAAGGCAAGCGGGCCACCTCAACTGTAAACAGTAACGCCAAGAGCGCCAAGTTGAAGAAGGATTCAGATTTGAATAATGAGCAACAATCCACTGAAGTGTTAATTAACGACAAAGATCTCATCACACCAACATCACCAAAGAAAACTATGGCATATAATCGTCCGGGTCGAAAGAAAATCAAAGGCGGAGATAACAATAATGAGGGTGCCGAAACCGAAATAGATAATCCAAACAGCCCTCCACCCGTGCGTGCACAGAGGCTTTCCAGAAAAACTAAAGAGGCAGCCACCATATATATGGGTATAATTGGACATCGCTTACAGTTGGGagatgatgaagatgatgacATTTCTTTGAGCAGTTTCGACCGGCCCAATGTACgtgaaatggaaaaaatggaGAATGAATTAAAGCGAAATGCAGCTTTGAGCGGTAAACAGCAAACGCAGAATCATGAATCATCGCCCGTACCCtccaaacaaatgaaaaaccaAACGGAGGAGTCATCTCCACCCACGGCCGCCTCCGTTTCAGTTTCGAGCAATGAGAAGGTTAATACGGGGCGTAGGGGTCGGCCACCAAAACATCAAAAGCAGCCAACCACTTTGCCGCTGCCGCCACCAGTTAAGCGCGAAATTGAAGGGATGCTGGTAAAGAAGGGAGCTCTAGCCAAAATGGCACACCAACAAAACATGGCGGTAGCAACAGAAAATTTGTTCGAAATCAAAGATATTAATAGAGAAGCATCTAAAAGCGCCACCAACGAGGAGGATGAAGATTTTCTGTTAAATGAAGAGCTCAACGAAACCAAACGGAAATTAGAGAAGAGTTTCAGCGACTCCGATGATGAGCCTCTGGCTATAAAAGCTCATATAAAGCCCGGAGACCGAGATGATAATACAGTAGAGCTGATGAGAGAACATCATCATTTGGCAGCTACTGGTTCTGTCACAGGTCCACAGTCAATGGCACAACCCGCAGTAGCGACGAATATTTCAACATTGACAATGTTACCTCTAACGACAAAACCCATCACCACAGCACCAACTCCGCCACCACCTACCACCACCCTAACTGCTACCATGTCCTCAGCATTGGTTGGGGGAGGCTCCAGTGCAATAATACCTTCGTCACCAACAGCAGCGCCAAACATTATTTTTCCAGCAGCTCCCGTCATTCCACCATCACCCTTTAAAGTGATCGAAAAGAAGTCACCCGTGCCGacatcaaaaatattaaatgttcCCGCAACATATGGTATACCGCCGGCCTCCCCCACTGGCGTCATGCCCAGCTCCATGGCAAACAGCTTCGGTAAAACTCCCATGTATGTACCACAATCTCCAGTACACTATCATTCGCATATACGGCCAACCAGCAACATACCGCCACCATTATATTCCGGTCAGCAAACGCAAACCAAATCGGCAGCCACAGTACCAGCGTCAACCGCAGCCAACAGTTCCCATTTAAATGCATCAGCTCAGACATCGTCCCTAAAGTATCAGACGCCACCCACGACATATCCGCCACCCATTGAAGCGTACCCATCTCCAAAAATTAATCCCAATTTTTTGACACCGAAATTTGATCGCAACACTTTACCACGTCACAGCAACTTGGCAAGTACGCACAATTCCTTTACTTCCCCATCGCCGGTCAAGTTCGATATGCCCACAACAACTCTGCTAAAGAACTCGCAATTATCGCAAGCAATTGCGACCAGCGTCAATTCAAAGAACATGCCGTCATATCCATGCAACATCATAGCAAACAATTTAGCAACCGCTTCAACTTCATCGGTTGCCGCAACTACAGCTGtaactgctgctgctgctgctgccgctAACATTAATGCTAATGCGTCAAGCAGTGATCCTCTAAAAGATGAGATCGGTAGTATTTTGGCTGCCAATTTAATGCCCAGTAAAGAAGAGTCGGGGAAAATTTTCGGTATTGCTAGCGTAAGTTTGGCGCAGAGTTCCGGTCCGGATAACACCAAGTGCACCTTGGGCAAATGCGGCTCTATACATAAACCTGTTCTCGGTCCGGTCGTGCCCACCGAAAGTTACATTGGGGATCAACTGTCGGGCAAAGAGCGTCGCAAAGCCAAAGTTAACATGACTCACGAGCAAATCCATAAATGGTTGATTGAGTGTTCTTCGAATCCAGATGAAATACAAGATGACCTGGACGATGATTTCGATTCCGATTTAAGGCCCAACAATTACAGCACAACGCCGCCACCAACGCGTGATGATAAAGAGAGTACTTCGTTCAGTTCCTCATCGAAGGCCACCAGAGATTTGGGTAAAAGTGAAAGTGCTTGGTCGGCAAAGGGTCCCTCATTAAAAGCTACACCCGTAGTGGCTACCAATAGTGGAAATGGTGGTGTCAACAACAATCGCACCAAAGATGATgcaaaattaaatgaaacgGCCAACAGTCCACACGAGGATGAATTGGACAAAACTTCACCGATTCTGATTATAATGTCGCGTGAAAAAGTCGCCATAAATAAGCAAACGACGTCGTCCCCTATAAGTATTGAAGAAAAGTCGTTGAGGAATACCGACAGGAAACCGGAGAGGAAACATcaccacaacaacaaggaGGAAAAGACGCCAATCGTAAAGGAGACAATGAAGCATTCGGAAAAGGACTCAACACCAATCACTAGTAAAACTGGTGGCGGCGCATACGGAAAACAGATTACCCATCAGAAAGTGACAAATCAAAAGAAAGTAGAATCTCCAGTGGATAGtcctacaacaacaacaacaacaagtaccGCAGCGAATAAATCAAATCGCAAGAAGGCTGCAGCTGAAGTTGTCAATGCAGAGCCCAGTCCAGGAAGACTTGGCGAACAGTCTTCGGACGTAAACGCGGACAATATGAATCGCACCCCCAAACGCATGCCAGTATATCAGCAAAAACAAGCCGCGAAACACTTACAACGCTGTGAACTGAAAGAGACAACAACTACCAGTCACAAGAAGACAGCACCATTTTCGTATGGCGGAGCATTCTCGGCGGACAATGAGAAATCGATTTACTCCTTCGATAAAGATGATGACCACGGTAACGAAGCAGAAGGCACCACCAATCATAAATCGGCAGGTACATATCGGCGCCAGCAGCACTTGGGGGATGAGAGTACCGTTAGGGATACCATCCCCACTCCCACCCCCACATCCTCCACTACTACACCGACAACTAATCAACAAGGGCGGGTTGTGTCAAAGAAAAGATCATCTGCTGCAATGGTTgaaaaagcaaataaagaatTGACGAATGCAGcgacacaacaacaaattagtTCCGTTTCGTTGACTTTAAGTCCCACAGAGAAAAGTAAGCTGGTAAAAGTCAGTTTGGATGCGGACGCGGCATTGCCAGGGAAGCCCTTAAAAGGCTCTACTACTAAAAGTGATAGCGGTGAGAGAGAGAACAGTGTTGGAGCGGGTAAGGTCAACAAGAGAAATGTAGAAACTGTTGCAGCCAATAATGAGGCTGATTCAAACGATTCCGCCGACGGACATACATTCTATATTCCGTTACAAGGAATCGGTGCTAGTGGTGAAGGGGAGGGTGGTATACAGGGAGTGGCTGTAAAATTGGGCCGTGAAGGTCCTGACGGTCCCAATCAAAAAGTGATTATGCACGCTACTCTGGTGACGAAAGCTCAAATGGGTGCGAACCCTAAACCGTTGCCCGAATCCATGAACGTTTCAGACATTGTGAAGAATCTTATGAACAGCGATAAAAAATCTACACCAAGTACTTCAGCAGCAGCTGCGGTCACCATCACCACGGTCGCGCCTCCCACACCAAATTCCGCTTCCAACAGCCTCAAAAATGTGCCCATCGGTACCGTACAACCTCGCTTTAAGGGTGAAACGCCTCAGCCGTCAACGTCTACATCGGCAGTGGCTGGCGGAAACTTAGTGCGCGTTAATTCCAACTCATCGCTGTTGTCGGGTTCGGTGAAATCTCGTAATGTTGCTGCTGGTGCGTCCGGCAGTGCTGGTCAAGGTGTCACCTCGTACAGCTCCAATAAGAAATTCAAAGATGACACACCCATTAAAATGGCCAACAATACTGCATTTCCACGTCACGACGATCCTACGCAAATGGTCGAGGCACCCATTTTCCGTCCGACCGAAAAGGAATTTGCCGATCCCATTGAATTCATTGAGCGCATCACCCCGATAGCGGCTCGTTTTGGCATTTGTAAAATAATACCACCGACCAGCTTTAAGCCGGAATGTCGGATATCAGATGAAATGCGCTTCACCGCCTACAATCAATACGTGCACAAAATGTTACACCGTTGGGGTCCCAGTGCCAAAGAGTTCAGTGCTATCAAGAAGTATTTGGCCACTCAGAGCATTGTTATGAATCATCCGCCATGGATTGGTGGTATGGAAGTGGATTTGCCTCGTCTGTATCATACGGTCCAGGAATTGGGCGGTTTGAAGGAGGTGATTGAGAAAAAGAAATGGGCTCGGGTGGCGGAAGAGATGTGTATACCAAAACTAGCACAGGATCGGGTGACCAAGTTGGATGACATTTATTGCAAGTATTTGTTACCCTATGACACTTTATCGCCGGCCGAACGGCAAAAATTATTCGACGAAGTGGAGGCCGATTGGGCCAAGCGGGAAGCACGCGCTCGTCGCAATGCTGATCGATTTGTTAACACGGAAAGTGTTTCCAATGAGGAGGATGATGTCACAAGTGAAAACGACGAAGAAGAATCAGAAGAAGAGGTGGATGGTGTGTCAATGGAGTGTATTGTGAAGGGCCGTAGCATGCCTTTGAGCCAATTCTATCGTATAGCGCGCAACACGATGGCGCTATGGTTCAAAAATACCGAGCCTATTGTGAACGAGGTGGAGGCAGAATTTTGGCGGCATGTAGCTGTAAGAGACAGTCACGTTTGCGTACATTCCGGTTCAATAGATTCCTCGGGTTGGGGTTATGGTTTCCCCAGTCCCGGCCCAAAAGGAAAGGGCTCCAATTATGCCCGACATCCTTGGAATTTGAAAGTCATGACCAACAATCCAGGTTCCGTGTTGCGTTCATTAGGTCCGGTAATGGGTGTAACGGTGCCTACACTGCATGTCGGTATGCTCTTCTCAGCCTGCTGCTGGTATCGTGATCCGCACGGCTTATCCTGGATTGAATACCTGCATACGGGCGCCTCCAAACTGTGGTACGGCATACCAGACGATCAAAGTGCTAACTTTAGAGCAGCCCTCACCTCACTCATTCCTACGCATTGTCAAAACAAGACCATTTGGTTGCCCTGTGATACGGTAATGGTGCCTCCGCATATGTTGACTGATCGTGGTGTCTCTCTATGTCGCATCGAACAGAAACCAGGtgaatttattgttgtttttccaCGTGCATACACCTCCAGCCTTGCTACCGGTTATGTGGTGTCGGAAAGTGTTTATTTTGCAACATCCTCTTGGCTAGATTTGGCCAAAGATGACTTTCGGgACATACACGACAGCTGTGAACCGGCCATGTTCTCTTTAGAACAATTACTGTTCGCTTTAGGTTATGATACGCGTGTACCACCTGATGCTCTGCAACAAATGTTGCCAATGCTGCAAGAAGTGTACGAAAAAGAAACGGCAGCTAGGGAACAACTTAagGCGGCCGGTGTTACCTCCACGGAAAAGGTGACGACTGAAAAGGGTGGGAAAAGTAAAAAGCAACAATTGCCGCCATACAAATCAATTGAAAGTGAATGCGACCTGTGCCGTGCCAATCTTTACATATCCATGGTGCGTACAGATGAGGGCAGCGTTTATTGTCTGCAGCATGCATTAAAGAATTTGAATAATGGGAATATACAGGCGAAAAAATGTAAACTCATTTATGCCTACAATGTGGACGATATTGAAAATCTGATTAGAACGTTAAAGGAACGCATGCAGCAGAAGCGtaacacgaatgctggtaaaaaacaaaaatag
Protein Sequence
MVVSKDSKRKRKESSTPTQQQQQQSSSTIESSPEMPKRNKVQAQRKFAQGQSAPQSSYSSIIASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGTSALPPHLDFLNQGRSREPPRPVRKSPNKRVNKKGKKTKSSPTKTVKNQNYATDTKQNNETHEDSNDGDEDEKTENIKGNNAIDQAGVEVQNKEAKNPTTCDEVPTYAVRKRADIVVEGNRRNNTSNNKELDKCSNSTECNVTKRSSRSMVRDARVILNPLPKIEADHPIPSTSVQQVASKTVHAQNDTNEQQQQVTGISKTCLKTDRKSETPSKESEFTTDRSRKGNRKKDSEIKNVPVKEIPSKTEIRDVKIPIKRSRQKESPIFIPSPEPSGRMTRQRAFFEPVKVLPKEVKQQHLANANEKSSEQSVKGSEINLTDEHKNKDESVSNKKVEPKPLNVKKEVNDTKKSTLKSNNVDVNKLKSDLNVFDFSSDDEQPLAKAMKFKKGGGGRSKKIAQRGNKKSSGNKIIEKAEAKAKEKGEVSTKQNEISTKAPEVERKEELLSSTTIKGKGKRATSTVNSNAKSAKLKKDSDLNNEQQSTEVLINDKDLITPTSPKKTMAYNRPGRKKIKGGDNNNEGAETEIDNPNSPPPVRAQRLSRKTKEAATIYMGIIGHRLQLGDDEDDDISLSSFDRPNVREMEKMENELKRNAALSGKQQTQNHESSPVPSKQMKNQTEESSPPTAASVSVSSNEKVNTGRRGRPPKHQKQPTTLPLPPPVKREIEGMLVKKGALAKMAHQQNMAVATENLFEIKDINREASKSATNEEDEDFLLNEELNETKRKLEKSFSDSDDEPLAIKAHIKPGDRDDNTVELMREHHHLAATGSVTGPQSMAQPAVATNISTLTMLPLTTKPITTAPTPPPPTTTLTATMSSALVGGGSSAIIPSSPTAAPNIIFPAAPVIPPSPFKVIEKKSPVPTSKILNVPATYGIPPASPTGVMPSSMANSFGKTPMYVPQSPVHYHSHIRPTSNIPPPLYSGQQTQTKSAATVPASTAANSSHLNASAQTSSLKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLPRHSNLASTHNSFTSPSPVKFDMPTTTLLKNSQLSQAIATSVNSKNMPSYPCNIIANNLATASTSSVAATTAVTAAAAAAANINANASSSDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLDDDFDSDLRPNNYSTTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVATNSGNGGVNNNRTKDDAKLNETANSPHEDELDKTSPILIIMSREKVAINKQTTSSPISIEEKSLRNTDRKPERKHHHNNKEEKTPIVKETMKHSEKDSTPITSKTGGGAYGKQITHQKVTNQKKVESPVDSPTTTTTTSTAANKSNRKKAAAEVVNAEPSPGRLGEQSSDVNADNMNRTPKRMPVYQQKQAAKHLQRCELKETTTTSHKKTAPFSYGGAFSADNEKSIYSFDKDDDHGNEAEGTTNHKSAGTYRRQQHLGDESTVRDTIPTPTPTSSTTTPTTNQQGRVVSKKRSSAAMVEKANKELTNAATQQQISSVSLTLSPTEKSKLVKVSLDADAALPGKPLKGSTTKSDSGERENSVGAGKVNKRNVETVAANNEADSNDSADGHTFYIPLQGIGASGEGEGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGANPKPLPESMNVSDIVKNLMNSDKKSTPSTSAAAAVTITTVAPPTPNSASNSLKNVPIGTVQPRFKGETPQPSTSTSAVAGGNLVRVNSNSSLLSGSVKSRNVAAGASGSAGQGVTSYSSNKKFKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPTSFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKEFSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVTSENDEEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTEPIVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVMTNNPGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDTRVPPDALQQMLPMLQEVYEKETAAREQLKAAGVTSTEKVTTEKGGKSKKQQLPPYKSIESECDLCRANLYISMVRTDEGSVYCLQHALKNLNNGNIQAKKCKLIYAYNVDDIENLIRTLKERMQQKRNTNAGKKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00384361;
90% Identity
iTF_01114797;
80% Identity
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