Othy001834.1
Basic Information
- Insect
- Ormyrus thymus
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_035582935.1
- Location
- JAWWEM010000002.1:738982-742193[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 3.5e+04 -5.0 1.9 15 19 122 126 122 126 0.85 2 19 1.2 1.4e+04 -2.9 0.2 4 10 157 163 157 163 0.87 3 19 3.4e-08 0.00039 21.3 18.3 1 19 171 188 171 188 0.99 4 19 1.1e-06 0.013 16.4 13.6 3 19 226 242 224 242 0.94 5 19 2.4e-05 0.28 12.2 11.1 1 19 277 296 271 296 0.90 6 19 0.00023 2.7 9.0 9.5 1 18 332 349 332 350 0.97 7 19 0.005 58 4.8 7.7 1 12 384 395 384 395 0.94 8 19 0.7 8.2e+03 -2.1 1.0 6 10 405 409 404 409 0.92 9 19 1.3e-07 0.0015 19.4 14.6 1 19 415 433 415 433 0.93 10 19 0.0011 12 6.9 7.6 9 19 481 491 479 491 0.90 11 19 0.00023 2.7 9.0 6.6 1 12 501 511 501 511 0.95 12 19 1.3 1.5e+04 -2.9 5.8 14 18 542 546 542 547 0.89 13 19 2.4 2.8e+04 -3.8 0.6 9 12 564 567 564 567 0.77 14 19 0.00024 2.8 9.0 7.2 1 12 583 594 577 594 0.91 15 19 1.2 1.4e+04 -2.8 1.7 6 10 610 614 609 614 0.88 16 19 0.058 6.8e+02 1.4 15.3 4 19 624 639 622 639 0.91 17 19 2.7 3.1e+04 -3.9 1.7 9 13 645 649 643 649 0.73 18 19 2.2e-06 0.025 15.5 11.7 1 18 684 703 684 704 0.90 19 19 1 1.2e+04 -2.6 0.7 5 10 733 738 733 738 0.93
Sequence Information
- Coding Sequence
- ATGAGGAAATTTAGAAGAGCTCAAGCACAAAATCATGCTTCCATTGTAAAACATTTGGAAGCAAACATTGAATCTTCTAGTAGTGATGAagaaaatcaagaagaattaGAAACAGCAGTAggaaaagttttatcaaaCTATGAGTGTGAAGGTGGTGatacaaataaaactttagctTATTTGACTGAAACTTTTCAGTCTGGAGGAGCAGTTTGTTTAATATGTATTTCATCAGTTAAAAAAACAGATCCAatttggaGTTGTACAGaatgttttacatttatgCACTTACCTTGTATTCAACATTGGGTTAGAGATAGTTTGAGTTATAAACATGAAAAAGGAATCACTCCTTTATGGGGAtgcCCAAAGTGCAGAGCAGAATATAGAGAAGATCAAATACCAAAAAAATATGTCTGCTTTTGTGGTAAAACGGAAGATCCATCTTATCAACCATGGCTTATTCCACATTCTTGTGGAGATATGTGTGGAAAATTTCTACAACCAAAATGTGGTCATAAGTGTACACTTTTATGTCATCCAGGTCCTTGTCCACCATGTCCAAAAATGGTATTCACTACATGTTTTTGTGGAAAGCAAGCACCTTGTCCCAGAAGATGCAATGCTAAAGAATGGAATTGTGGtgaaatttgttataaaaaatacaaaacatgTGAACATAGATGTGTAGAAAAATGCCATTCAGGTTCATGTCCACCTTGTTCAGAGAAAGTGCTTACATCATGCAATTGCAAAAGCAAGtctgaattgaaaaaatgtactGAATCTTTTTGGCATTGTGATAAAGTATGTGGAAGACGTTTCTCGTGTAATGTTCATGTTTGTGAAGAATTATGTCACAAACCTGGAGATTGCAATACTTGTCCatttgaaagaaatagaaCTTGTCCATGCGGTAAGAAAAAGTATACTATATCTTGCAGACAACAACAAGCACCTACTTGTGGAGATACTTGTGGTAAATTGTTAGATTGTGGAGCTCACTACTGCAACATGAGGTGTCATACAGAAAAATGTGGACAATGTTTAGAAGTTGTAACAAAAACTTGTCGTTGTGGAAGCTTTCAAAAAGAAACTGCTtgcataaaagaatttcactgTAATAAAAAGTGTTCACAAATGAGACTTTGTGGTAACcatttatgcaataaaaagtgttgtgattgtttattaaaaaatacttttaatgctTGTGAAAAAGTATGTGATAATACATTAAATTGCCGTAAGCATAAGTGCTCAGCTCCGTGTCACAGTGGACCTTGTTATCCATGTCCTCGCACTATTGTTATTCAGTGTCGCTGTGGGAATAGCAAAATTACAGTTCCATGTggaacagtaaaaaaaatcaaacctccaaactgtaataaaatgtgtaaaattCCTCCAATTTGCCATCATCCTAAAAGGGAATCCCATAAATGCCATCAAGGAGTTTGTCCACCATGTCGTAAAGTTTGTGGattaacttataaaaaatgtggTCACACTTGTCCAGCGTTGTGTCATACAAAAGTTTGGACTAAAATTCAACCGAATGGTGTCACTAAACCAATAGGACCTTgggaaaatcaaaaagaaagatGGGAATATAAAACATTTCCATGCCCTCCTTGTGAAGTTTCTGTTATGGTTACATGCCTTGGAGGACATGAAACACTACCATGGCCTTGTCACAAAGCTATTCCAAGCTCTTGCCTTAGAGAATGTGGTCAATTATTATCTTGTACAAATCATAATTGTGAAAAACTCTGCCACAAATTAGAATCAACAGCTGAAGACAACGAAGATAATAAATGTATGGAATGTGAAAAACCCTGTAGCTTTCCAAGACCTAAAGGATGCACACATTTGTGCCCAAAGCTTTGCCATCCTCCTACTTGTGAACCATGTAAACAACTTGTAAAAGTTCCTTGTCATTGTGGTATCAATACTCTCTATATACGTTGTGCTAAACTAACATCTGCTACTATTGAGATTCGCAATGAACTTCTGCAGTGTGGAAATCAGTGTCCACGGAATtaTCCCTGTGGTCATCGATGCACTGATAACTGCCATACTGGTCCATGTCAAAATGCTGAGTCTTgcagtaaaaaagtaaaagtcacatgtaaatgtaaaaggataaaaaaagattttttatgtacttcAATAAGAGCTGGAAAAGCAATTGTAAAATGTGATGAAATATgtcaaaaaaagaaggaagagaTGGATCGCGTTCGAGAaattgaagaagaaaagaaaaaaaaagaagaggaattaaaaaatcaaaaagaaattgaaatgtttgaaaagaaatttaaaccaaaaaaaagaggaaaagatCGTTATCATAACAAAGAATTATCAGACAATAGTGGCAGCTCTTATAAATGGATATGGGTAGTTGCTGTACTACTTGCCATATTTTCAGTTGCAATTATGCTGACATTCCaattaaagaaagaattgCTTTATTTAGGATAA
- Protein Sequence
- MRKFRRAQAQNHASIVKHLEANIESSSSDEENQEELETAVGKVLSNYECEGGDTNKTLAYLTETFQSGGAVCLICISSVKKTDPIWSCTECFTFMHLPCIQHWVRDSLSYKHEKGITPLWGCPKCRAEYREDQIPKKYVCFCGKTEDPSYQPWLIPHSCGDMCGKFLQPKCGHKCTLLCHPGPCPPCPKMVFTTCFCGKQAPCPRRCNAKEWNCGEICYKKYKTCEHRCVEKCHSGSCPPCSEKVLTSCNCKSKSELKKCTESFWHCDKVCGRRFSCNVHVCEELCHKPGDCNTCPFERNRTCPCGKKKYTISCRQQQAPTCGDTCGKLLDCGAHYCNMRCHTEKCGQCLEVVTKTCRCGSFQKETACIKEFHCNKKCSQMRLCGNHLCNKKCCDCLLKNTFNACEKVCDNTLNCRKHKCSAPCHSGPCYPCPRTIVIQCRCGNSKITVPCGTVKKIKPPNCNKMCKIPPICHHPKRESHKCHQGVCPPCRKVCGLTYKKCGHTCPALCHTKVWTKIQPNGVTKPIGPWENQKERWEYKTFPCPPCEVSVMVTCLGGHETLPWPCHKAIPSSCLRECGQLLSCTNHNCEKLCHKLESTAEDNEDNKCMECEKPCSFPRPKGCTHLCPKLCHPPTCEPCKQLVKVPCHCGINTLYIRCAKLTSATIEIRNELLQCGNQCPRNYPCGHRCTDNCHTGPCQNAESCSKKVKVTCKCKRIKKDFLCTSIRAGKAIVKCDEICQKKKEEMDRVREIEEEKKKKEEELKNQKEIEMFEKKFKPKKRGKDRYHNKELSDNSGSSYKWIWVVAVLLAIFSVAIMLTFQLKKELLYLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01470178;
- 90% Identity
- iTF_01113122;
- 80% Identity
- -