Basic Information

Insect: Ormyrus thymus
Gene Symbol: -
Assembly: GCA_035582935.1
Location: JAWWEM010000044.1:10934342-10938601[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.21 29 6.3 1.6 1 23 646 668 646 668 0.79

2 17 0.19 26 6.5 1.8 1 19 674 692 674 695 0.92

3 17 1.2 1.6e+02 4.0 0.5 2 23 701 722 700 722 0.95

4 17 0.00039 0.053 14.9 1.5 3 23 731 752 730 752 0.97

5 17 0.008 1.1 10.8 2.3 1 23 759 782 759 782 0.97

6 17 0.00033 0.045 15.1 1.1 1 23 788 811 788 811 0.94

7 17 7.2 9.6e+02 1.5 1.4 2 23 819 839 818 839 0.90

8 17 4.4e-07 6e-05 24.2 2.1 2 23 845 866 844 866 0.97

9 17 1e-05 0.0014 19.9 0.2 1 23 872 894 872 894 0.99

10 17 0.00062 0.084 14.3 2.9 2 23 906 928 905 928 0.95

11 17 0.019 2.6 9.6 1.1 1 23 934 957 934 957 0.95

12 17 0.019 2.5 9.6 2.5 2 23 978 1000 977 1000 0.93

13 17 0.0056 0.76 11.3 1.2 2 23 1007 1029 1006 1029 0.96

14 17 5.9e-05 0.0079 17.5 1.0 3 23 1038 1058 1036 1058 0.96

15 17 0.009 1.2 10.6 2.5 1 23 1064 1087 1064 1087 0.95

16 17 1.4 1.8e+02 3.8 4.1 2 23 1094 1115 1093 1115 0.96

17 17 0.0057 0.76 11.3 2.8 1 23 1121 1143 1121 1143 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.21	29	6.3	1.6	1	23	646	668	646	668	0.79
2	17	0.19	26	6.5	1.8	1	19	674	692	674	695	0.92
3	17	1.2	1.6e+02	4.0	0.5	2	23	701	722	700	722	0.95
4	17	0.00039	0.053	14.9	1.5	3	23	731	752	730	752	0.97
5	17	0.008	1.1	10.8	2.3	1	23	759	782	759	782	0.97
6	17	0.00033	0.045	15.1	1.1	1	23	788	811	788	811	0.94
7	17	7.2	9.6e+02	1.5	1.4	2	23	819	839	818	839	0.90
8	17	4.4e-07	6e-05	24.2	2.1	2	23	845	866	844	866	0.97
9	17	1e-05	0.0014	19.9	0.2	1	23	872	894	872	894	0.99
10	17	0.00062	0.084	14.3	2.9	2	23	906	928	905	928	0.95
11	17	0.019	2.6	9.6	1.1	1	23	934	957	934	957	0.95
12	17	0.019	2.5	9.6	2.5	2	23	978	1000	977	1000	0.93
13	17	0.0056	0.76	11.3	1.2	2	23	1007	1029	1006	1029	0.96
14	17	5.9e-05	0.0079	17.5	1.0	3	23	1038	1058	1036	1058	0.96
15	17	0.009	1.2	10.6	2.5	1	23	1064	1087	1064	1087	0.95
16	17	1.4	1.8e+02	3.8	4.1	2	23	1094	1115	1093	1115	0.96
17	17	0.0057	0.76	11.3	2.8	1	23	1121	1143	1121	1143	0.98

Sequence Information

Coding Sequence: ATGTCTAAAAAACATCTGGATGCAAATATTGCATCTTTTGATGAAGAGGCTTACGATACTGATAATTTTACAGAGTATCTCATAGatgataaaaatgtattgagTAACAATGatcctataaaaaaatatgtattaaatacaATGAAATCTGATAATGAAGATCATAATTATACTGATTTGCAATTGGTAAGAACAGAAAATATGGATAATATAAGAAACACAAATTCAAAGAGTAGTTTTATTTACTCTAAAGTGGCTAATtccggaaaagaaaaatttattggccTCAAAATAACAAATCTTAATGATCTGAAAAAAGCAACACCACGACTTAAATTGCCAGCACTTTTATCTTCGCAAGTTGTTAAGAAAACTCCAGCAGTCCCTGAAGAAATTAAACAGAAATTGCATAAGTATTGTCGTACTTGTGCAGGACTGAAAGTTCCATTAGTTGATATTTTCAGTGAAAAAGGAATTCAAATGAGGTTAGGTCAACAAATACAACACTTAGAAGATATTAATGAACATGACAGTTTGTCAACTCAAATGTGCATGGACTGTATATGTGATATGAAAAtgagttataaattttttatgcaaattaaaaaagctgaaatGAAGTTAAAATCTATTAGTAATACACTCAATGATTCAGTATCTAAATCACCTCAAATAACCAATGAAAGTAAAGAAACAAATGatacaaattctttttctacaGTAGATGATTCAAAAAGTCCAAGTATTGACGATGATTTTACTGTAAATGATGTAAAATATGAATCAGGAGATTACATTTATACcgaaattaatgatttaagtgattttaatgaatctaTTGAAGAATTTGATCCTCTGGTTGATGAAAGTTCTACGAAAAAGATGGTGCATGAAACTCtggaagaaataaatgaatttctgcaagattctaaaaatgtaGCATATAAATATGATGATTCATTGAAAGCATACATTAAAATAGGGTCTAGTCACAATGACGTAACAGATgatactgaaaaattaaatgttgaaaataataGCAAATCAGAATCAACTGAGGCTGAACGCATACATCACCCAAGAAAACCtaatatattgaaaagaaatatatcAAGTGATGAGAATGACGAAATTAACATCAAAAAAGAGTATCGTAATCTAAGTATTGAtctaaaagatttgaaaattccaaaattaaatcttcatGATAAATCTAacataaaaaaggaagaaaatggTGTTATGTATGTTACTGCAAAAGGATCAAAACCTAATGAAATgttgttaataaaagtaaaaaaaatggataaatcTTCAGATAATAAAGAAGAGAAAGGTCATGGAAAGAAACGAAAATCACCTGGATATCATAAAATGTCCaaagataaatataatcaaaaaGATATTGATGAACAAATAGagcaatataaaaagaaaagagtcgAAGTATTGGGAGAAACTGCTCACATATCAGAAATAGATTTTGAAGAAGAAATTCCAGAAATTAGAACTAAAGTAAGTCGAGATGATGATTTGAATAAAGCAGCTGTTAAACAGGAAGAAAAAGTAGATGGGAATAAAGTTGAAAACAAAGTTTCACAGGGGCCTGAAGAAACTGAACCACTTTCACCTGAAAGTAAATCTAGATTAGAAAAGCTAAAACAAAGGTGGCAAGATATTAAAAAGAGACATGATGTCATTAATAGAGATTTGGCTGAAGACTGTTCAGATAGAttaagagaaattttaaaacagaaagaTGAGTACATTCAAgattttgtttcttatttaaaacaaagaagaaTTGTAGTATCTCGTTTACGAGATGAAGACATAATTTCATTGTatgaagcaaaaaataatgtggTATTAGAAAAACCACTCACAGTGAGTGAACCAGTGGAAGAAACAGATCctttcgaaataaaagaagtttatCCTTGTGATTTTTGCGATCACTCTTTTTCaagcagagaaaaagaatatGAACATGCAAAAATTCATGATTTCAAATTAATGCACTACTGTGACGATTGTAAGCAAGAATTTTCAACCCATAAAGCAAAACGAGCCCACAATGCGTCTTGTGTACAAAAGATAATGTGTAGATATTGTGATGTAGTATTAGAATctaaaggaaagaaaagacAGCATGAACAAAAACATTGTGATGAAACTAATGGTCAGCTTTGTGAGTTATGTGGAGAAAAATTCAAGCATCAAGGCACATTAGATCAACACATAAAATCTCGTCATAcacaattagaaaaaattttcaaatgtccTCAGTgctcaaaaaaatttgctttaagGACAAAGTTAACTTTCCATTTAAAAACTGTACATACAACTAGTCGTCCTTATTTATGTGAAGATTGTGGatctgattttaaaaatcctgCAAGTTTGAGGCACCATAGAATACGAAAGCATCAATTggtaaataacaaaaaagaatgttCTGTGTGCCAGAAAATGATTCCAGTGTACAGTATGTCAAAACATATGCATACACATAAAGCATACACAATTGAATGCCCTCATTGtgacaaaatgtttaaaaacactTCAACATTAAAACAACATCTAAGAATTCATGAAGATCAGAGGCAATATAAATGCGATATGTGCGGTGTTGGATTTAACAGACGAGATGGTTTAAGGTTACACTTAAAAGTACATCAGAAAACTGACAGTAGAGGTTTGAAAGAATGTTCTTGTCAAATTTGTGGAGAAAAGTTTCCAAATCACTCAATGCTTGTAATTCACAGAAATCGTACACATAAAGATGGTAGAAATTATACTTGTTTCATCTGCAACAGATCTATGATATCTTCACGATCATTAGAATGGCATTTGTCTCATATACATAATGAAACAATGCCAGGGGTTAAGGATGACTCTAGCATAGATGCTGAAACTAAGCGAGTTTCTTGTTACCATTGCGATAAAACGTTCAAGACCGAGATGATTTTGCGAACACATGTCAAAAACACGCATACAGAAAAAGAGCCTATGAAATGTTTAGACTGTGACTTGTTGTTTACCTCAGAAGTTCGTCTGAAGCATCACATGATGGTAACACATAATCGCTTGGAAGGAACCTTAGCATGTCCTCATTGTCCAAAAAGGTTTGTCAATCAGTTACGATTAAAGACTCATATGATTTCTCATTCGGATGAAAGGCCGCATACTTGTGATTTATGTggttttatgttaaaaacaaaaattcaacttATTAAGCATAAGCAAAACAGACATAGCAATGAAAGGCCACTGCAGTGCAGATATTGTTCATGGAGGTGCAAACAAGTAAGTGCATTGGTTTGCCATGAAAGAACTCACACAAATGAAAGACCTTACAGTTGTAGTGTCTGCaaacaaaagtttaaatatttaggtgataaaaataaacacgaaAGAAGGCACGAAAGTCTCGGAGGTTCAGGATTTAAAAGAATAGTCACTGGTAGAAATACTAATAAGGTACACAGGGTAAAAGAAGGAGACTCAACTGAAATAGATTCTGAACAAGAACAAGATGAACTTGCTGAAGAAACAAAAGAGGATGAGGAATTTGAAGAAAGAATGGACGAAGAAATGGAGAGTTTTGACGAAtcacaaattattaaatttgaaactgGTGAAATTGTTGCCGAAGATACAGATCCAAATTTTGAaaggatgTATGTAGAAGATACGTCACAAGACACTGATGATACAACAACAGAAGTTGTCATGGGAATGGAAGAAACAACAGTTTACACAGAAGAAGTGACGGCTGACCATGTTGGTACAGAAATAATAGCAAGTGACATTATAGATCAACGATTGTTACAACCAGGTACTGTTGTTCATCTTCAGCAAGAAGATGAAACGGGCAAGATTCAAATGATACCAGTTATGTTATCTTTACCAGATTTAACAGATGCCACTTCCGAAGTCGGGTTGGCGACTACTTCTATAatgtacaataattaa
Protein Sequence: MSKKHLDANIASFDEEAYDTDNFTEYLIDDKNVLSNNDPIKKYVLNTMKSDNEDHNYTDLQLVRTENMDNIRNTNSKSSFIYSKVANSGKEKFIGLKITNLNDLKKATPRLKLPALLSSQVVKKTPAVPEEIKQKLHKYCRTCAGLKVPLVDIFSEKGIQMRLGQQIQHLEDINEHDSLSTQMCMDCICDMKMSYKFFMQIKKAEMKLKSISNTLNDSVSKSPQITNESKETNDTNSFSTVDDSKSPSIDDDFTVNDVKYESGDYIYTEINDLSDFNESIEEFDPLVDESSTKKMVHETLEEINEFLQDSKNVAYKYDDSLKAYIKIGSSHNDVTDDTEKLNVENNSKSESTEAERIHHPRKPNILKRNISSDENDEINIKKEYRNLSIDLKDLKIPKLNLHDKSNIKKEENGVMYVTAKGSKPNEMLLIKVKKMDKSSDNKEEKGHGKKRKSPGYHKMSKDKYNQKDIDEQIEQYKKKRVEVLGETAHISEIDFEEEIPEIRTKVSRDDDLNKAAVKQEEKVDGNKVENKVSQGPEETEPLSPESKSRLEKLKQRWQDIKKRHDVINRDLAEDCSDRLREILKQKDEYIQDFVSYLKQRRIVVSRLRDEDIISLYEAKNNVVLEKPLTVSEPVEETDPFEIKEVYPCDFCDHSFSSREKEYEHAKIHDFKLMHYCDDCKQEFSTHKAKRAHNASCVQKIMCRYCDVVLESKGKKRQHEQKHCDETNGQLCELCGEKFKHQGTLDQHIKSRHTQLEKIFKCPQCSKKFALRTKLTFHLKTVHTTSRPYLCEDCGSDFKNPASLRHHRIRKHQLVNNKKECSVCQKMIPVYSMSKHMHTHKAYTIECPHCDKMFKNTSTLKQHLRIHEDQRQYKCDMCGVGFNRRDGLRLHLKVHQKTDSRGLKECSCQICGEKFPNHSMLVIHRNRTHKDGRNYTCFICNRSMISSRSLEWHLSHIHNETMPGVKDDSSIDAETKRVSCYHCDKTFKTEMILRTHVKNTHTEKEPMKCLDCDLLFTSEVRLKHHMMVTHNRLEGTLACPHCPKRFVNQLRLKTHMISHSDERPHTCDLCGFMLKTKIQLIKHKQNRHSNERPLQCRYCSWRCKQVSALVCHERTHTNERPYSCSVCKQKFKYLGDKNKHERRHESLGGSGFKRIVTGRNTNKVHRVKEGDSTEIDSEQEQDELAEETKEDEEFEERMDEEMESFDESQIIKFETGEIVAEDTDPNFERMYVEDTSQDTDDTTTEVVMGMEETTVYTEEVTADHVGTEIIASDIIDQRLLQPGTVVHLQQEDETGKIQMIPVMLSLPDLTDATSEVGLATTSIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01112900;
90% Identity: iTF_01112066;
80% Identity: -