Othy002090.1
Basic Information
- Insect
- Ormyrus thymus
- Gene Symbol
- ZBTB41_1
- Assembly
- GCA_035582935.1
- Location
- JAWWEM010000010.1:2091521-2096888[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00038 0.051 15.0 0.4 1 23 326 348 326 348 0.96 2 18 0.057 7.6 8.1 2.3 1 23 401 424 401 424 0.92 3 18 0.004 0.54 11.7 3.7 2 23 463 484 462 484 0.97 4 18 0.00036 0.049 15.0 0.2 1 23 532 554 532 554 0.97 5 18 0.00043 0.058 14.8 0.1 1 23 560 582 560 582 0.97 6 18 5.5e-06 0.00074 20.8 0.8 2 23 626 648 626 648 0.95 7 18 0.00078 0.1 14.0 0.5 2 23 656 678 655 678 0.95 8 18 0.00023 0.031 15.7 1.0 2 23 700 722 699 722 0.92 9 18 0.00011 0.015 16.7 1.3 1 23 747 769 747 769 0.93 10 18 0.1 14 7.3 0.0 2 20 836 854 835 854 0.95 11 18 0.0026 0.35 12.3 0.1 2 23 873 894 872 894 0.96 12 18 0.029 3.9 9.1 6.9 1 23 937 959 937 959 0.96 13 18 0.026 3.5 9.2 1.3 3 21 979 997 978 1001 0.85 14 18 0.048 6.4 8.4 0.5 2 23 1063 1085 1062 1085 0.93 15 18 0.01 1.4 10.5 3.2 3 23 1114 1135 1112 1135 0.90 16 18 0.0056 0.76 11.3 0.3 3 23 1144 1166 1142 1166 0.87 17 18 0.29 39 5.9 5.0 1 23 1171 1194 1171 1194 0.97 18 18 0.0096 1.3 10.6 0.4 2 23 1226 1248 1225 1248 0.95
Sequence Information
- Coding Sequence
- ATGAGCGATATCGTCGAGGTCAATAGTGGCTTCGAAAATGCCTGCAGGCTGTGCCTTACGACTGAACGAACGAGGTCCTCAATCTTTGCATTGCCGGAGATCAATGTGCCCTTTACCGAAAAAATTCGTTCCTGCGTATCTATTCAGATCTCATCGAATGATAAATTGCCAACATTGGTTTGCTCAAAATGTATCGACAGCATAAATCATTGGCATTCGTACAAAAATTCTTGTCTCAAATCACAAGAAAAACTCCAACAATGGTTGGCAAAACAACCTTCTCTTATTCagACTGTAACTATAAAAGAAGAACCAATAGATAATggatatgaaaataattctgtCCAAGGTGTCACCAATGATACTAATGATGCAAATGCTTCATTAAGCACAAAGAATGCAGGCAAAAAAAGTGATTCTGTTTCAAAAACAACAGCTTCATCAAATCAAACAGCTCAGTTTGAACTTTCTGGACCCGAAAAAGATTTTCGAATGATAAATGAGATAAAAACTGAACCTATAGACACCGAAGATGAAGATGACTGTAATGTTGATATTGAGTCAGTTGCTAGTGgagaacttttaattaatccaaTGGCAGTAGCTGCAGGTAATGCAGTTAATAATGACAGAATCATGGAGGCAGATTCAACTCAGAAGTTCGGTACAAAAAATTTAGCTCCACATGAATATACTGCTAGGGGTCCACTGAGCAAGCCAAAAGCAAAAACAAGTCAAAAGTCATGTCTTCAAGATAATGTAGAGAATGAACCTGAAGATACACAGATTCCTGATTACAGTCCAGAAGATATAGAATATGTGAAAATGCACCTGCCTGGTTTGCGACCTTATACGTGCATTGCTTGCCTCACTGAATTTTCTGATAGATCCATGTATAAACTTCATTGTGGTGCATCCTTTGAATGTGCAATGAAGATTGCTCTTGTAATTCCAAGAACAGgcagtgaaaaatatttcacctgCAATATGTGTCTGCGATCATTTAGCAATCGTCAAGAACTTCTAATGCACTTGGCTGCTCATATGGAGAAACAAAAGCCTCAGCCAGTTCGATCTCCTGCAAAACTTAAGACTTTGACTACTAATTATGCACCGACTACCAGGATGGAAACTTCCCCTTCCAAGAAATCAATCGCAACACTTGCTGGACCATACATGAGTGGAGATCCAGCTTACAATCATATGTGTGATCTATGCGGTATGATCTACCGTTACAGGCCAAATATGATCAAACATCGGGATCTCTGTCATACTCTGGCAGAAGAAATAAGGACTTCCTACAGATGCGTTCATTGCAGCATGACTTATCTagtatacaaaaaattctataCGCACGTTTTCCAAGAACACAAGAAACGAGAGATTACATGCTTCACATGTCATGAGCGATTCACTACTCCTGACGATTACCTTACACATCACGAAACCCATCGTACTGACGGTGCACCCAATTTTCAGCAACTCAGCGATGCCGCCTCGAACCAACTACCAACAACAAGCAACGAGGACTACTCAATGGTAGTGGATCATCTTAATTCATCCACCCATCCGACTGACGTGGGCGAGAAACCGTTTAACTGTGCGCTCTGCGGCGAAAGCTTCGTCTCAAAGCTCGAGCTGACCGAACACCGCAATCTTCATCTGAAAGTAAAGATTTACTCTTGTGTCATTTGTCGTAGCATGTTCAGTAGCTCCGGAGCTCTTGAGGTACATATGAAAGATCACGGTATTCATGATTCTAATGAACAGGCTGCGAATAGCTCATGCCTTGAGTACGGCCGTGGAGATAGCTCGCAGAGTTCACTTAACGATTCTTCGCTGTCCACCCAGTCGGATCCGGGTAGTCGTTTCAATCGTTGCGGTATATGCggtaaaaacttttctaattaCGCTAACTTGAAGAGACACGAAAAGAACCTCCACTTCAGGCAGAGGCGCCGGTGGAGCTGTGACGACTGTAAACGCCGCTTCAAGTCAATTGAAGCCTTCAATGAACACTTGAAAATAACACATGGAAAGCCGCCGCATGAGCAAGAGGCTCCACCTCAATTGTCTGCTGCTGGAAAACCAATGATGCAGTGTCCGAAATGCCCGAAAACTTTTGCTTATCAAGGCTACTTAATTCAACATTGCCAAACTGTTCACAAAGAGAACCACTATGAACGAGCAAAGGCAACTGCCACAGCTCGCCCATTTGTGGCTACTGTACCTCGCGGCCACTCTTGCGACATTTGTGGCAAGACCTTCCGCGAGGAACAATCTCTCAAAACCCATCGAGGTTGGCATCTACGcactaattataaactaaaaataaacaagactCCACCAGGAACACCTATCCCTGAAGAAACTGTAATGAGTGGTCCTGGATACACCGTTACAGCGGTTCCTCAGATTAAAACTACTACGCCTAAACCAGCAAAAGCACGCAAGTCCTTCCCCAACAACCCGTCACAAAAGCAGTTGGGAATGGTTGCAAGTCTACAGTGTCAAGTGTGCGATGATCGCTTTGCTGATGTCGGAGAGTTAAGAAAACATTTATGGGATATTCATTGTGCTCGCAACAAGCCCGAGAAATCTTTTACCACTGATCTGCAATGTGAACTTTGTACTAATAAATTTCCTGACGAAGACGCTCTCGTAAACCACATGCAGTGGCATAAAGACAATCCTATTCTAAGCGACCATCCGACCGGTCAAGAGAGAGTCGATGAAATCGTCGAAGCAGAATCCGCTCTCGATGAAGCAATAACAAATTTGTCAGCTCAAGACTCTAATAAGAAACCTTTCTGCTGCGACACATGTGGCAAGTACTATAGCAATCGTAAGCTCTTCCTTCgccataaaaaatttcacaaagcAGCACCTGCCTCAGTCATGAACTTCCAGTCGTTACAAACAAAACGACCATATTGTCAGCCATGCCAGAAACCGTTCTCCACGGAGGCATCTCTGAAGCGACATAAAGCGTCACCTTGCCACACGTTTATGGTACGATCCCAAAGACAAGTGCCTGCCAAAAAGATCACAACTATGGCTATGGTTCACGAACAATCTTCTGAGCCTATTAAAATTTCGCTTGTCAAAAATGAATTAGAAGGAGAATACTCGGCAAATCAAGGAGAAAATCAAGTAGCTACTCAAGTTAACAAAAAAAGGCCTGTTACGTGTCACATTTGCAACTCAGTCTTTCCAAATATGAGTGTTTTGTACCAACACAAACAACTCGTGCACAGTAAAGTGCCGGTAAATCGCAAAACTGTTAAGCAGCAACCAAAAGAATGTGTGCCCATTGTAAGTGCAGAAGGTATGGTCTGCTGCAATGTATGTGGAAAGCAATTCCCGGGAATATCGAATCTGAGACAACATTTCTCTCATAAGCACAAATCGAAAAGTAACATGTTCGCGTGTGTTGCGCCAGGATGTAAACTAGTTTTTACCACAGCGCACTCCTTAAAAAGTCACGAAACGGTACATGCAACtactattttcaattgccTTCTATGCAACAGGCATGTATTCAGCAAATCTTCGATTCACAAACACATGTTGACAATGCATAAAGCAATTTATGATTCCGGTgcaagcaaaaataatttatggtCCGAAATAGATTTATCAACGTACCATGTTAAAAATGCCCAGGGGGGTACCGAATGTCCAAAATGTAAAGTTAAATACCCGAATTTGAGAgcgttaaaaattcattacataAAGTTCCATGAAAAgatgaattcataa
- Protein Sequence
- MSDIVEVNSGFENACRLCLTTERTRSSIFALPEINVPFTEKIRSCVSIQISSNDKLPTLVCSKCIDSINHWHSYKNSCLKSQEKLQQWLAKQPSLIQTVTIKEEPIDNGYENNSVQGVTNDTNDANASLSTKNAGKKSDSVSKTTASSNQTAQFELSGPEKDFRMINEIKTEPIDTEDEDDCNVDIESVASGELLINPMAVAAGNAVNNDRIMEADSTQKFGTKNLAPHEYTARGPLSKPKAKTSQKSCLQDNVENEPEDTQIPDYSPEDIEYVKMHLPGLRPYTCIACLTEFSDRSMYKLHCGASFECAMKIALVIPRTGSEKYFTCNMCLRSFSNRQELLMHLAAHMEKQKPQPVRSPAKLKTLTTNYAPTTRMETSPSKKSIATLAGPYMSGDPAYNHMCDLCGMIYRYRPNMIKHRDLCHTLAEEIRTSYRCVHCSMTYLVYKKFYTHVFQEHKKREITCFTCHERFTTPDDYLTHHETHRTDGAPNFQQLSDAASNQLPTTSNEDYSMVVDHLNSSTHPTDVGEKPFNCALCGESFVSKLELTEHRNLHLKVKIYSCVICRSMFSSSGALEVHMKDHGIHDSNEQAANSSCLEYGRGDSSQSSLNDSSLSTQSDPGSRFNRCGICGKNFSNYANLKRHEKNLHFRQRRRWSCDDCKRRFKSIEAFNEHLKITHGKPPHEQEAPPQLSAAGKPMMQCPKCPKTFAYQGYLIQHCQTVHKENHYERAKATATARPFVATVPRGHSCDICGKTFREEQSLKTHRGWHLRTNYKLKINKTPPGTPIPEETVMSGPGYTVTAVPQIKTTTPKPAKARKSFPNNPSQKQLGMVASLQCQVCDDRFADVGELRKHLWDIHCARNKPEKSFTTDLQCELCTNKFPDEDALVNHMQWHKDNPILSDHPTGQERVDEIVEAESALDEAITNLSAQDSNKKPFCCDTCGKYYSNRKLFLRHKKFHKAAPASVMNFQSLQTKRPYCQPCQKPFSTEASLKRHKASPCHTFMVRSQRQVPAKKITTMAMVHEQSSEPIKISLVKNELEGEYSANQGENQVATQVNKKRPVTCHICNSVFPNMSVLYQHKQLVHSKVPVNRKTVKQQPKECVPIVSAEGMVCCNVCGKQFPGISNLRQHFSHKHKSKSNMFACVAPGCKLVFTTAHSLKSHETVHATTIFNCLLCNRHVFSKSSIHKHMLTMHKAIYDSGASKNNLWSEIDLSTYHVKNAQGGTECPKCKVKYPNLRALKIHYIKFHEKMNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01112877;
- 90% Identity
- -
- 80% Identity
- -