Othy005034.1
Basic Information
- Insect
- Ormyrus thymus
- Gene Symbol
- ttk
- Assembly
- GCA_035582935.1
- Location
- JAWWEM010000027.1:17152006-17157163[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-09 2.6e-06 28.0 0.0 1 38 481 519 481 523 0.92
Sequence Information
- Coding Sequence
- ATGAACGACGGCAAGGAGATGCAGCCACCGCCTCCGAGGAACAGGAGGAAGCGCGCCAAGCACGAAGTCACGCGGCAGCCGGTCCGATCCGTGTCCGCGAGCCCGGTTTCGGACAACTCCTTTTCCTGCGAGCTCGTCTCGACGAGTGAACTGCAGGAGCTCGAGGATATTGAGAGCAGACCGATCGTGCCGAACGTAACGatgCGACAAATCGTTGATCCCGAAAACCCCGAGGATGCGAACAAAGTGTCTATATGCTGGCAGAATCACAGCAGCAATTTCGTCTTGCTGTTTAATCAAATGTTGAAAACACAATCCTTCACGGACTGTGTATTATCATCAAGCGGAGGAAAGCACTTCCCGTGCCATAAAGCAGTTCTGACAGCTTGCTCTGACTATTTCAAAGACCTGCTCAGATATTACGATAGCCAATCATCACAATTCATCGTCCTAACGAATGTTTCTCAGGAAGATCTCGAAGCAGTCCTGAAGTACATGTACACCGGGATTGTTAGTGTCACGAAAGAGAAACTCGACAGGTTTCTCAGGTGCGCTGACACGCTCAAGTTGAGGGGCGTCGGAGCTTTATTCAATCGTGAAAGGGAGTCAGACATGGACAATTCCAATTTGAATACCGAATTCCTTCATTCTAGTCACAGAAGAACTTGTAGCTTAAGTAGTAATAACAGTAGTCCTTCTCAAGCCGGTTCAACGACATCTTACAACGATCAAGCACAAAGGGAATACTCTTTCGAAAACAGCCAAAATCCCCTGTCGTTATGGGGTGCGTTTCCGGTCTTGTCGCAGCACATGCAATCGCCAGCGCCTTCGTACGAGCCCCAGAATCACCAGCTTCCAAGAAGATCCTACGACAATTCCTGTGAATCCTCTCCTCTCAGCAGGAAGAAGCAGCTCAGCTCGATGGTTAATGCAGATACTCCCATACTAAGGAATGTCCTCGGACGACATCAGAATGAAGTGGCACATAGTCAGCAGAATGGTACAGGACAAGGCAGACAAAATGGCACGCTTGTCAGTGGACAGGGAGGTGCAATGATGGCTGCACCAAGACAAGGCAATCAGCATCTAGCGAGACAAAACGGAGTAGTCTATCCACGTGGTAACCTTGAGTACGGGAACGGGTTGCACGGAAACGGCATGCATGGCCATGGAATGAACGGCCATGGAATGAACGGCCACGGGATGAACGGCCACGGGATGAACGGCAATGGGATAAATGACGATCCGGGCGAGGGTACTAGCACTGGCACTAGAAGAAGGAGGAGAGCTCCTACGAATTCGCGTAAACGAGGCTCTCGTGCACCTCCGAAAACTACGCAAGTGGAGTACGATGACCAGGGCAATCCACTGCCTCCTGAACAAGAGCCCGATGGGCGAGGAAGACGAGGAACTAAGGAATGGAAAAGGTACAAGCAATACACGCGCGAGCACATACTAACAGCAATGGAGGTAGTGCGCAAGAAGGAATTAAGTGCCTTGCAAGCAGCTCGGAGGTACGGAGTTCCTTCGCGAACTTTATACGACAAGCTGAAGAAAGCCGGTATTCTTCCGTCTCGAGCAGCGGCTAAgaaaaatgctgaaaaaaatGGCTCGCCCAACGGATGCAACGATAATAACTCGAACGAGGAGAGCGCTCAATTCCCCTACGCCGAGGGAGTCAACGGAGAGGTCTACGGTAACGTGAACCGCTCCATCGAACCTGATGAAGTCttggaaattgaaaacaatcgGCACCGAAATTTCCTAATGGATGCAAACGATATGTCAGGATCCCACAATGCCAGTTATGAAAACGGATATCGCGGGTTTGTGGGCGAAATCAACGAAGGTGCAGGTCCGAGCGGAGTGAGTCGGCACCACAGCAGCTACGTGAAGATGGGCGAAGAAGTAGTAGAGGAGGGTAGCTCGGAAAGCGAAACTGACTATTCGCAAATAGTAATGCAAAACGGTATGAACGGTATCCACGGCATGAACGGCATAAACGTTCAGGGGTATGCCATGAACGGCATGCATCACATGAACGGCGAGATGGGCATCGAGGACCATCACCGTCGAACGGCTTACGCAGCGGCCCAGGCGGTCCAGAGAGCCCAGGTAGCGGCCCAGCTGCTCCGTCTGCCCCGTCATGCCGAGCGTGCGGACGAAGCACCCTCCGTGCCATCGAGCCCCTCTCCCGCCCGTCGCTATCTACCGATTAACGTTCCAGCTCTGCTGCCCACTTTGGCactcgccgctgccgctgcggcTGCCAATACTCCCAGAGCCACGCCTTCGCCGATGCTTGCTAACGGCGCGGACGACAATCACGCGGAGGATTTGTCTATGAGGAatagcagcagcaacagcgcAAGAGCCAGCAACTCGAACGACTCCATACCTCCACCGATCATTGTCTTTAAAAGGGAGCGCAAGGAAGAGAGGACCGAGGAAGAAAATGACCAAGAACGCTAA
- Protein Sequence
- MNDGKEMQPPPPRNRRKRAKHEVTRQPVRSVSASPVSDNSFSCELVSTSELQELEDIESRPIVPNVTMRQIVDPENPEDANKVSICWQNHSSNFVLLFNQMLKTQSFTDCVLSSSGGKHFPCHKAVLTACSDYFKDLLRYYDSQSSQFIVLTNVSQEDLEAVLKYMYTGIVSVTKEKLDRFLRCADTLKLRGVGALFNRERESDMDNSNLNTEFLHSSHRRTCSLSSNNSSPSQAGSTTSYNDQAQREYSFENSQNPLSLWGAFPVLSQHMQSPAPSYEPQNHQLPRRSYDNSCESSPLSRKKQLSSMVNADTPILRNVLGRHQNEVAHSQQNGTGQGRQNGTLVSGQGGAMMAAPRQGNQHLARQNGVVYPRGNLEYGNGLHGNGMHGHGMNGHGMNGHGMNGHGMNGNGINDDPGEGTSTGTRRRRRAPTNSRKRGSRAPPKTTQVEYDDQGNPLPPEQEPDGRGRRGTKEWKRYKQYTREHILTAMEVVRKKELSALQAARRYGVPSRTLYDKLKKAGILPSRAAAKKNAEKNGSPNGCNDNNSNEESAQFPYAEGVNGEVYGNVNRSIEPDEVLEIENNRHRNFLMDANDMSGSHNASYENGYRGFVGEINEGAGPSGVSRHHSSYVKMGEEVVEEGSSESETDYSQIVMQNGMNGIHGMNGINVQGYAMNGMHHMNGEMGIEDHHRRTAYAAAQAVQRAQVAAQLLRLPRHAERADEAPSVPSSPSPARRYLPINVPALLPTLALAAAAAAANTPRATPSPMLANGADDNHAEDLSMRNSSSNSARASNSNDSIPPPIIVFKRERKEERTEEENDQER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01110309;
- 90% Identity
- iTF_01113578;
- 80% Identity
- iTF_01113578;