Basic Information

Insect: Ormyrus rosae
Gene Symbol: -
Assembly: GCA_035047165.1
Location: JAWWML010039199.1:2068-14745[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.6 7.8e+02 1.7 0.4 2 10 3 11 2 13 0.86

2 15 0.033 3.9 9.0 1.1 1 21 31 51 31 52 0.95

3 15 0.017 1.9 9.9 3.6 1 21 60 80 60 83 0.95

4 15 0.0094 1.1 10.7 3.6 2 21 91 110 90 111 0.94

5 15 9.3e-05 0.011 17.0 1.3 1 23 117 140 117 140 0.97

6 15 0.022 2.5 9.5 7.0 1 21 149 169 149 170 0.94

7 15 0.34 40 5.8 1.5 2 23 177 199 176 199 0.94

8 15 0.019 2.2 9.8 1.8 1 23 922 945 922 945 0.97

9 15 0.013 1.5 10.3 4.2 1 21 958 978 958 979 0.94

10 15 0.019 2.3 9.7 7.3 2 23 987 1009 986 1009 0.95

11 15 0.0018 0.22 12.9 2.6 1 21 1022 1042 1022 1043 0.96

12 15 1.9 2.3e+02 3.4 3.6 1 15 1142 1156 1142 1163 0.82

13 15 0.04 4.7 8.7 0.8 2 20 1181 1199 1180 1201 0.93

14 15 1.6 1.9e+02 3.6 2.2 1 23 1209 1232 1209 1232 0.96

15 15 0.013 1.5 10.3 1.4 1 20 1245 1264 1245 1266 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.6	7.8e+02	1.7	0.4	2	10	3	11	2	13	0.86
2	15	0.033	3.9	9.0	1.1	1	21	31	51	31	52	0.95
3	15	0.017	1.9	9.9	3.6	1	21	60	80	60	83	0.95
4	15	0.0094	1.1	10.7	3.6	2	21	91	110	90	111	0.94
5	15	9.3e-05	0.011	17.0	1.3	1	23	117	140	117	140	0.97
6	15	0.022	2.5	9.5	7.0	1	21	149	169	149	170	0.94
7	15	0.34	40	5.8	1.5	2	23	177	199	176	199	0.94
8	15	0.019	2.2	9.8	1.8	1	23	922	945	922	945	0.97
9	15	0.013	1.5	10.3	4.2	1	21	958	978	958	979	0.94
10	15	0.019	2.3	9.7	7.3	2	23	987	1009	986	1009	0.95
11	15	0.0018	0.22	12.9	2.6	1	21	1022	1042	1022	1043	0.96
12	15	1.9	2.3e+02	3.4	3.6	1	15	1142	1156	1142	1163	0.82
13	15	0.04	4.7	8.7	0.8	2	20	1181	1199	1180	1201	0.93
14	15	1.6	1.9e+02	3.6	2.2	1	23	1209	1232	1209	1232	0.96
15	15	0.013	1.5	10.3	1.4	1	20	1245	1264	1245	1266	0.93

Sequence Information

Coding Sequence: ATGATCTACTGCTCTAAATGCGACAAAAGCACAAAGCTCATAACCTGGAATAAAGACGTCCGCTGCGAAACGTGCGAGTCAAACGTAGTTTACGCATGCGCCCGTTGCCAAAAACGCTATCAAAGGATCAAGTCGTTACGCGCCCATCTTCGTCATCTCTGCGGCAAAGAGCCCAAATACTACTGCGCCCACTGCGACTACAAGACGGCGCGCAAGGCAAGCCTGCAGGTACACGTCAGGTGCAAGCACTCGGAGCTAGGCAAGGAGCAGGAGTGCTTAAAGTGCGGCAAGAAGTACAAGCACCGCTCCCACATGTTGTACCACCAGAAATACTGCGGCGCGAAGAACTTCACCTGCGACCGTTGCCCTCGCAAATTCTCTAAGCCTATTTACCTTCAGATGCATATTAGAAATAAGCACACAGATCCGGAGGCACTTGAATATCATTCTTGCGAGAGCTGCCAGAAGAAGTTCAAGCATCACTCCAACTATTACCGACATCGAAAGATTTGCCAAGAAGAGAAATGGAAGTGCGAGCACTGCGGGTATTGGACTAGACAAGAGCAGAAATTGATGAATCATGTTAAAGAGAAACATAAGGAGGAGACTAAATCGAAAGTTAAGGAAGATGTTAAACCAAAACTTGAGGATCTTCCCACCCCGAAACTTGAGGATTCGGCTAAGAATCAGAAAGGAAGATTTGCTTTGAAGAGGAAGAgatACGAAATAACAGGATTTACAGAGACTGACGCAATTAGGCACAGAAAAAAGAGGGCATCGTCTACAAATTCTGCACGTAGATACTCAAGCGAATCAGATTATATTGTTCAAGATAATAACGGATTAGATTTGGCAATTAACTTACCACCAtcaaattcagaaattaatcATGATATTGTAACTGCTTATAGCCAGggTTACCCTATGATGAACGTCAGAGAATGGGTTCAACATTATGATAAGAACAATTATAGGCAGTGCcctttagaaaaagttttggaTAGCGGTGTAGTAGAACCAGCTGATCGGCGAGCTCTGGTCAGAATAATTGTTGAGGGAATGGTGCAGTACAATTGTGGTAActtATATCCATCGTGTCAGTTGAAGAACCAACTAGCAAAAGATGTAATTAGTGCTTTTCCAAAACTGCGTTCTGCAAGCGGGGGTCAtGAACATTTTTTCGAaccaaaaacaaacaaaggCTTTATagaatttagattaaaaactcttcgtttaaaactaaatactCAAAAGAGGAACCGAGGACCTTCTAAAGAAAGAAGAACGTCTATATCTCACAAAATACCCgctaaaattgcaattatgGAAAATTTACTAGACGAAGAAGTATTCAAAGCAAAAGTTTCCGAATTAACTTCGTTACTGTCGTCTGAAGAAAATagaagtaaaataatgaaacttaGTGATGAAACTAGACCTAATCGACAGAGACAAATAAAGACTGCGCTTGAACGAATACCAATTGATGTAATACTTACTTTATATCCTAAATTTACTGCATTCAATGGTGAACTGatacgGAAAGAATTTTTAGCTGAATATCCCAACCACGACATATTCTTAAATAGATTTACTTCGTTTTATTCTATcagaattttacaatattgcgCAACTACAAAACCTCAACTTTTACAAGCCGTTCATGATATAGAAGATcgTCATTTGAAGGCACTATTAATTTTGCCAGAATTACTTCCGATTCCTAACTATCACAAAAGGAAAGACAAAGAAAGACAAAGTgaTTTATTCTTACCATTTAAGCCGTATAAACCATTTAACAAAGACATACCAAATGATAGTTTGATTCAGTACATCAGAGCAACAGATGAAGTATTTCTGCGAAATGTTCGTTCTAATAAGAGTCCATATTTGGTTTGCTTCATGAAAGATTACTATAGAAAAGGCGACTTTTACATTAGGGCCGACAGTAATTTAATCAGGATCGGTGACAACGCAATGGAAGCCTTTGATGTCATGTTAAAGATGCACTACTGTTTTGACGTGCCCTTTTCATCggatttggtttatttttacgattttataaCCGGCTGTATTTTACAATTGAATGAACCCAGAGGGTCTTGCATTGCATTGAATTCAACGATAAGCAATGTCGACATAAAAAATGCATCGAGTTATCAAATAGAAACGAAACCATTCTTAAAAATCCGTGAAATAAGATCTCTGAGACCAAAGGAATATACTTCTTGTCATTATCCAgatgaagATCCAAGTCAATCTAAATATCTCAATTACAACGAAACTGATGATGAAGATGaatcgaatttaaataattcttattcaGATTCTGAATTGGTACCTTTTGGATTAAATTTTGCGGGTTCAGAGAATGTAGAGAAAGTAGAGAATGTAGAGGATGTAGAGGATAAATCGAGCGATGAAGAATACAACCCGGATGAGGATGATTGTGAAGATGAAACACTAAGtaggaaaaaaaatggcaaaatagAAACTCTAAATGACGGAGAAGAAACTTTGGacaatttctttcaaaacgaATTGGTCGACGCTGCTGCCAAAGAagGAACCATCTCTGAGCTACTTAAGGTGCACTGTGAGACCTGTGGCACGACCAACCAGAACTCCAACCCCGATAATCTGGTTTCACGTTGTCAGGACTGCACGACAGAGCTGAAATTTCAGTGCGCCAAATGCGATCGTCTCTATACCTTATTCAACAGAGCGCGCAATCACGCGCTGACGTGCAACCAGCCAATGTGGTACTCGTGTTCCACATGCAATTACAAGACCCTGACCAAGTTCAATTTGACGCTGCACATTCAGACAATTCATATGCTCCATCCGGACGATGACGATGATTCCGAACATCACAGTTGCGTCCGGTGTGGCCGAAAGTACAAGCGCCGCAAGCACATGCTAAGACACCAGAAGCTGTGCGGAAAGACACCCCACATCAGGTGCAAGTTCTGCCAATACACGACCAAGAGGACTGACCACCTCAAGCAACATATGCAGCACCGGCACCCGGAGCACGATTTACAGCAAAACAGTTCGATGATTTACAGTTGTCCGAGGTGCCACAAGAAGTATAAGTATCTGATGTCCCTCAAGACACATATCAAGCAATttACGGAGGCTGTGAGAATAAAACCTATAAGTGAACTTAGAGATAGCCAAGTTGTAGCTCGTCCATTAAAAGTTGTAAAAGAAGAGCATTCTTTTGAAGACGAGCAgtccgataaaaataatttggatGAAACGGAACTGACTGAAGATAATTCAAATCCTCTTGAGCGTAAATCAAAATGGAAAGAAATCAACGAGAATCTCTTGGTGTATTGCCGCCGCTGCAAGAAGCTCTCGCCAAAGATCCACGGGAAGAAGCACGTCCTCTGCAGGACCTGTTTCTCCGTGCTGCTGTTCCAATGCAAGAACTGCAGCCGGCAATTCAAGACTTACGGAACCTGCCACCTGCACGTCAAGGCCTGCTGCAAGCATCCCCCGGAGCCCCCGAAAATCATGAGCAATATGCTGAAGGTGTGCAACTGGTGCAAAGGAAAGTACAAGACGGCCCATTCGCTCCAACGACACAAGGAGTGGAACTGCCCCAATAGACCCGAGCACAAGTGCATGCATTGCTCTTACTCGCCCGACACCAGGCAGTTACTTGTCGCCCATCTGGAGACGCAGCATCCGAGGCAGTACCAAGTTGGCATTTACCGGAACGTCTTCGTTTGCAGCGACTGTGGAAAAGACTGTTACAGCTCGTTGCAGCTGCGTTACCatacaattaagaaaaattgtaaagagGAAAAGGGACAACGTGCAGCAGAACTTTAG
Protein Sequence: MIYCSKCDKSTKLITWNKDVRCETCESNVVYACARCQKRYQRIKSLRAHLRHLCGKEPKYYCAHCDYKTARKASLQVHVRCKHSELGKEQECLKCGKKYKHRSHMLYHQKYCGAKNFTCDRCPRKFSKPIYLQMHIRNKHTDPEALEYHSCESCQKKFKHHSNYYRHRKICQEEKWKCEHCGYWTRQEQKLMNHVKEKHKEETKSKVKEDVKPKLEDLPTPKLEDSAKNQKGRFALKRKRYEITGFTETDAIRHRKKRASSTNSARRYSSESDYIVQDNNGLDLAINLPPSNSEINHDIVTAYSQGYPMMNVREWVQHYDKNNYRQCPLEKVLDSGVVEPADRRALVRIIVEGMVQYNCGNLYPSCQLKNQLAKDVISAFPKLRSASGGHEHFFEPKTNKGFIEFRLKTLRLKLNTQKRNRGPSKERRTSISHKIPAKIAIMENLLDEEVFKAKVSELTSLLSSEENRSKIMKLSDETRPNRQRQIKTALERIPIDVILTLYPKFTAFNGELIRKEFLAEYPNHDIFLNRFTSFYSIRILQYCATTKPQLLQAVHDIEDRHLKALLILPELLPIPNYHKRKDKERQSDLFLPFKPYKPFNKDIPNDSLIQYIRATDEVFLRNVRSNKSPYLVCFMKDYYRKGDFYIRADSNLIRIGDNAMEAFDVMLKMHYCFDVPFSSDLVYFYDFITGCILQLNEPRGSCIALNSTISNVDIKNASSYQIETKPFLKIREIRSLRPKEYTSCHYPDEDPSQSKYLNYNETDDEDESNLNNSYSDSELVPFGLNFAGSENVEKVENVEDVEDKSSDEEYNPDEDDCEDETLSRKKNGKIETLNDGEETLDNFFQNELVDAAAKEGTISELLKVHCETCGTTNQNSNPDNLVSRCQDCTTELKFQCAKCDRLYTLFNRARNHALTCNQPMWYSCSTCNYKTLTKFNLTLHIQTIHMLHPDDDDDSEHHSCVRCGRKYKRRKHMLRHQKLCGKTPHIRCKFCQYTTKRTDHLKQHMQHRHPEHDLQQNSSMIYSCPRCHKKYKYLMSLKTHIKQFTEAVRIKPISELRDSQVVARPLKVVKEEHSFEDEQSDKNNLDETELTEDNSNPLERKSKWKEINENLLVYCRRCKKLSPKIHGKKHVLCRTCFSVLLFQCKNCSRQFKTYGTCHLHVKACCKHPPEPPKIMSNMLKVCNWCKGKYKTAHSLQRHKEWNCPNRPEHKCMHCSYSPDTRQLLVAHLETQHPRQYQVGIYRNVFVCSDCGKDCYSSLQLRYHTIKKNCKEEKGQRAAEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -