Basic Information

Insect: Ormyrus rosae
Gene Symbol: -
Assembly: GCA_035047165.1
Location: JAWWML010000012.1:22255416-22259027[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.12 14 7.2 0.7 2 23 335 357 335 357 0.88

2 8 5.4e-06 0.00063 20.9 0.6 1 23 375 398 375 398 0.97

3 8 7e-05 0.0083 17.4 2.3 1 23 446 468 446 468 0.98

4 8 1.5e-05 0.0018 19.4 2.0 2 23 474 495 473 495 0.96

5 8 0.00016 0.019 16.2 6.4 1 23 501 523 501 523 0.98

6 8 0.0001 0.012 16.9 4.5 1 23 529 551 529 551 0.98

7 8 1.8e-05 0.0021 19.2 2.4 1 23 557 579 557 579 0.97

8 8 0.0054 0.63 11.4 4.9 1 20 585 604 585 605 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.12	14	7.2	0.7	2	23	335	357	335	357	0.88
2	8	5.4e-06	0.00063	20.9	0.6	1	23	375	398	375	398	0.97
3	8	7e-05	0.0083	17.4	2.3	1	23	446	468	446	468	0.98
4	8	1.5e-05	0.0018	19.4	2.0	2	23	474	495	473	495	0.96
5	8	0.00016	0.019	16.2	6.4	1	23	501	523	501	523	0.98
6	8	0.0001	0.012	16.9	4.5	1	23	529	551	529	551	0.98
7	8	1.8e-05	0.0021	19.2	2.4	1	23	557	579	557	579	0.97
8	8	0.0054	0.63	11.4	4.9	1	20	585	604	585	605	0.94

Sequence Information

Coding Sequence: atgtgcgCCCGTTTGCTGGCCTGTCCGCTGTGCTCGCAGCCGGGTTTCCTGACTCTGGACGCCCTGCGAGCCGGCTTGGTCAGGGTGGCGACGCGTCCCCTGGTGTGTCCCGTCTGCAACGAGGTCTTGCTGGGCATCGACAAGTTGACGATCCACCTGTTCGGGCACAGCATCAATCCCAACAACGTCGTCAACGCCGTGGACGGCGCCACCGGCAACGAAGCCACGAAAATCATCGAGGTCACGTCCAATGGCAATGTCCAGGCCATTGTCAGAAATGCCCAGACCATCCCCTTACAGTCCTGGAATGTGATGAATGCCGCGCAGACAATTGGCGACGGCAAAGGCCAGCTGGAGGAGGCTGGCAGAGAAAATCAAGGGAGCGGAATCTATATACCGATCGACGAGATCGAAACGTTTAGATCTGCTCTCAAGGATGGAAACAATGTTATACCTGTAAATAATGCTCAGAATATTACGGAAGTTAAAGGAACTAGTCAGGTCATTTTCCTGCAGAACGTTGCTACGCAGCCCAAGATATTTTCAGCTAATCTAATCGGCCAAACTACCGATTCTGAGCCGATAAGTACGAGCCTCTTTCAGGCAGCCCCTGTAGTAACCTCAGCAATAAGTTCAACAGCTGCAGAAACTGAAACTCAAATGGATCAATCATGTAGACAGGAAACTAATGCTAATTCAATGAATAAGAATGAAATGGTTGTTCAAAATGGTGCTGATACTTTAAATACCATCACAGATAAATCTAAGGAACTATTTCcgcagAATGCCTGGACTGATAGTGTAAGCTCAGAACCGGCCGTAAAATTCGGACCATCGCACACGGATAGATTAGCAGATCTTGTAAAAAACGCTCAGATCACATCTTCACCACTGGGAAACTTTCACGAATCTTTCGATTGTTCAAAACCCGAATCACCGCCACCCAAATCAAAaccaattataaaatcaacGAGAATCATCACACCGAGTGAGAAAACTGAAAGATGTAATATCTGCGGTTTTCATTTTCCCGACAAAAACATTCTTTTGTTGCATAAACAGCTCGTTCACAGAATCCAAGCACAAGACTCGAACAAAGCACCGGAagctttaatgaaaaatttcccgTGCCATCTCTGCACaaaggtttttaaaatgaagGGTAGTCTTATGGTGCACATGATGGTAGCTCACCCTGGATTTAATTCGTCGGGCTCAATTaaagaaattatgcAACAAAAGGAACAGGAAAAGAAGCTGCAACAACAGAAAGAGAAGCAAAACGAACTGCAAAAGGAAATAGAACCAGTATCTTACAATGAGCCTGAAGCTGGTTATAACTGTCCGACAtgcggaaaaaattttaaaaaagaaCAACATGTTATGCagcatttgaaaattcacGAAGGTAAACAGTGGGAATGTGATGTATGCAGTAAAATGTTTAGTACGAAATACTTTCTTAAGAAACATAAAAGGCTTCACTCGGGTGAAATGCCCTATAAGTGCAATATATGTGATAAGACGTTCACATTCCAACAGTCCTATCACAAACATAGACTTTACCATAAAGACGATAAACCCCACACGTGTAATACTTGTGGTCGATCATTCAAAGAACTTTCAACGTTGCACAATCACGAAAGGATTCACACAGGAGAAAAGCCGTTTGCTTGTGAAACGTGTGgaaaatgtTTCCGACAAAGAGTTTCCTATTTAGTACACAGACGAATACATACGGGAGTTATGCCGTACAAATGTACGACTTGTGGAAAAACTTTTAGATATAaggtTAGTCAAAGGACTCACAAATGTCCTTTACATCCCGAAAATCAAGAATTGCAACAATCTGGGAATTTAAATAGGAATTTACTTGAATCGACTGAAATGAATGATTTACAAGAATCCTCTTcacaagaagaaaaatatatgaatgaaCCAACtgtaaatgatgaaaatcaatatgttttaattttgaataatgaagGACAACATGTACTGAAGAAAAAATCAGATgttgataatgaaaataagcaaaaaaataatcaaaatatcgGAAATGAACGAAATAAAGATGATACAAGTTCAAGTAGTGATTTCATGCAACACCTTTGGAATCAAGAATCATTTGATCAAAtggaatataaagaaaatagttcTAAAAAAGATGATATGGTTTCAAATGTTATAAACGACTCCAACTTGTGGAATGGAATAtccaacaataaaaataattctgctATTAATTCTAACGatgtcattaaaaaacaatttaatgtaaaagaattaaGTAGTGAATTTACTAACAGCCCATGGAACATAgacaatacattaaataatcaaattacaaatgaaaaagcaTGTAATGATAATCAAGCGAAAAGTCCGAGAGATTTCTTTTCCTTGGTTTTGTCTCCTTTAGAAAACGGTCTGCCCTCTCCATCAACTGAAATGCAACATTTAAGGCTATCTTCGccaataaataatcaagagAATCAATCTGAAGCGAATGATTGTTTTCCACCGATGAATAGCAGCGTAAATCCCGTCCAAGTAGATCATAATactgaagaagaaaattttacagaaaataatcTTTCCACACTACAGACTATTAACGaagattctttaaaagaattgttgTACAGCATTACAGATAAATag
Protein Sequence: MCARLLACPLCSQPGFLTLDALRAGLVRVATRPLVCPVCNEVLLGIDKLTIHLFGHSINPNNVVNAVDGATGNEATKIIEVTSNGNVQAIVRNAQTIPLQSWNVMNAAQTIGDGKGQLEEAGRENQGSGIYIPIDEIETFRSALKDGNNVIPVNNAQNITEVKGTSQVIFLQNVATQPKIFSANLIGQTTDSEPISTSLFQAAPVVTSAISSTAAETETQMDQSCRQETNANSMNKNEMVVQNGADTLNTITDKSKELFPQNAWTDSVSSEPAVKFGPSHTDRLADLVKNAQITSSPLGNFHESFDCSKPESPPPKSKPIIKSTRIITPSEKTERCNICGFHFPDKNILLLHKQLVHRIQAQDSNKAPEALMKNFPCHLCTKVFKMKGSLMVHMMVAHPGFNSSGSIKEIMQQKEQEKKLQQQKEKQNELQKEIEPVSYNEPEAGYNCPTCGKNFKKEQHVMQHLKIHEGKQWECDVCSKMFSTKYFLKKHKRLHSGEMPYKCNICDKTFTFQQSYHKHRLYHKDDKPHTCNTCGRSFKELSTLHNHERIHTGEKPFACETCGKCFRQRVSYLVHRRIHTGVMPYKCTTCGKTFRYKVSQRTHKCPLHPENQELQQSGNLNRNLLESTEMNDLQESSSQEEKYMNEPTVNDENQYVLILNNEGQHVLKKKSDVDNENKQKNNQNIGNERNKDDTSSSSDFMQHLWNQESFDQMEYKENSSKKDDMVSNVINDSNLWNGISNNKNNSAINSNDVIKKQFNVKELSSEFTNSPWNIDNTLNNQITNEKACNDNQAKSPRDFFSLVLSPLENGLPSPSTEMQHLRLSSPINNQENQSEANDCFPPMNSSVNPVQVDHNTEEENFTENNLSTLQTINEDSLKELLYSITDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01110418;
90% Identity: iTF_01111263;
80% Identity: -