Basic Information

Insect: Ormyrus rosae
Gene Symbol: salm
Assembly: GCA_035047165.1
Location: JAWWML010000012.1:618456-631445[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.2e-06 0.00073 20.7 0.9 1 23 400 422 400 422 0.98

2 9 1.2e-05 0.0014 19.7 2.1 1 23 428 450 428 450 0.98

3 9 0.73 85 4.7 1.8 3 23 852 872 851 872 0.92

4 9 5.4e-08 6.3e-06 27.2 0.6 1 23 878 900 878 900 0.97

5 9 0.001 0.12 13.7 4.1 1 23 910 932 910 932 0.97

6 9 0.0032 0.37 12.2 2.1 2 23 1252 1273 1251 1273 0.97

7 9 0.017 2 9.9 1.1 1 15 1279 1293 1279 1293 0.94

8 9 1.3e-06 0.00015 22.9 2.1 3 23 1514 1534 1512 1534 0.96

9 9 9.4e-08 1.1e-05 26.4 0.8 1 23 1540 1562 1540 1562 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.2e-06	0.00073	20.7	0.9	1	23	400	422	400	422	0.98
2	9	1.2e-05	0.0014	19.7	2.1	1	23	428	450	428	450	0.98
3	9	0.73	85	4.7	1.8	3	23	852	872	851	872	0.92
4	9	5.4e-08	6.3e-06	27.2	0.6	1	23	878	900	878	900	0.97
5	9	0.001	0.12	13.7	4.1	1	23	910	932	910	932	0.97
6	9	0.0032	0.37	12.2	2.1	2	23	1252	1273	1251	1273	0.97
7	9	0.017	2	9.9	1.1	1	15	1279	1293	1279	1293	0.94
8	9	1.3e-06	0.00015	22.9	2.1	3	23	1514	1534	1512	1534	0.96
9	9	9.4e-08	1.1e-05	26.4	0.8	1	23	1540	1562	1540	1562	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGCTGGAGCATCACCCGGAGGCTagagagccgcggcgagaAGCAGCGCCGCGACGCCAGGATCTGTCAGCCGGACACGCCAGAGGCCAGGCTCTCCTACTCGCGCTTCTCCGGGGAAGACAATGAGTCGGCATCGGACGGCGAGGAGAGCGCCGGAGGCGGCGCGATGGGCGACGAGGCGGTCGACCTCACCTCGGCCCGATCGCACCACGAGGACGAGCTGGAGCCCGAGGACCGCTCGCTGCCCGCGGAGATGCCcgaggacgaggacgaggagcCGGACGAGCCCGAGGACTTCGAGTCCGCCAAGAAGCTCGCCGGCAGCCCCGACCCCGACGACGAGCCCTCGCACAAGCACGAGCGCCTCTGCCAGGACGCCGAGAACAACAACAGCTTCGTAGAGGGCGGCCCGGCGGCTGCGGGCGTAATCCCGGCCGCCCCCACTAGTCACGTGACGCTCGAGGCCCTCGAGAACACCAAGGTCGCCGTGGCGCAGTTCGCCGCCACGGCGCTGGCCGGCGGCGCCGACAGCGAGGCCGCTTTCCAGGACCTGGCCGTGCTGCAAAGCACCCTCTTCACTCTCCAGCACCAGCAGGTCTTCCAGCTCCAGCTAATCAAGCacctgcagcagcagcttcaCGGCGGCGCCCAGCCCCCTGAGGGCCCCGCGCCCGACAGCAAGGAGGCCTCACCCTCGCCCGCGGCCCTCATCCAGCCCAAGCCCCTCTCCTCGCTGACCTCGCCTCAGCAGTCGCGGCCACCCAGCCTGCTGCAGCAGCCGTCACCCTCGAGCACGCCGGCGGCGCCCGCTACCGCCGACCGGCAAACGCCCCCGGGCGGCGCCTCCCCGCTGGGGGCCGCGCTCGCCGCCGTCCCCAGCGCCACGCCGCCCGCCAGCGCGGCCCAGCCGCCCAGCCACCAGGTGCCGGCGCTCTGCTCCATCAGCTCCTCGCTCGCCAGCTCCATCATCACCAACAACGACCCGCTGCCGCTCCACGAGCCCAACACCCTCGAGATGCTGCAGAAGCGCGCCCAGGAGGTGCTGGACAACGCGAGCCAGGGCCTGCTGGCCAACAACCTGGCCGACGAGCTGGccttccgcggcggcggctccggcGGCAAGGGCTCGCGCCTCTCGCCGTACGACGGcaagagcggcggcggccgcggcgagcCCTTCTTCAAGCACCGCTGCCGATACTGCGGCAAGGTCTTCGGTAGCGACTCGGCGCTGCAGATCCACATCCGCTCCCACACGGGCGAGCGGCCATTCAAGTGCAACGTCTGCGGCAGCCGGTTCACCACCAAAGGCAACCTCAAGGTGCACTTCCAGAGGCATCGGGAGAAGTTCCCCCACGTCAAGATGAACCCGAACCCCGTGCCCGAGCACCTGGACAAGTTCCATCCACCGCTCATGTTGAGCTCGGGCAGCTACGGGCCGCGGGGCATGGTCTcgccgcctccgccgccgctgcccccCATGCCCCCGCATAGCTCGGCCGGCGTCCCGGGGCCCCCTCCAGGCGCGCCGCCCGGCTTCCACGCGGACGCTTTCCTGCccccgccgcagccgccgctcTCGCTGGCCCTGGGTCTGCCCCCTGGCATCCCGCCCGCCCTCTACCGCTCACCGCTGCTGAACTCGGTCACCGCACACCGCGAGGACCAGGACGCGCCTGCGGATCTGAGCAAGCCCCAGCCGCCCGCGGCCTCCACGCCGACTACACCGTCGCACTCGGTCACGCACTCGCCGGCCCAGTCGCCGAACCCGCATCATTCCTTCAACAAACATTGCCAGCAGCAGAAGATCCAGCAGCAAGACGAGCTCGTCAAGATGGAGCAGGACCCGTCCCCAGCCGGCGGCGAGTACCACCACCGGCCGCCGCGGTCGATCAGCCGCGAGGCCCCGGCAGAGGGCATCACGCCCAAGAACGAGCCCGAGGATACGGAGGAGCTCAACGAGGAGGAACCCGAGGAGTTCGAGGACCCCTCCAGGCGGTACATGAACTCCTCGCCCTCCTCGGCCAACCAGGCCTCCTCGGTCCACCAACAAATCTACGAAGACTGCAGCATGGAGAGCAAAGTTAGCGGCCGACTAGAGGCCGAGGGCGCCGACATGGAGTGCGACGACGACATGGACGAGCAGCCGGAGAACCTATCCAACAGGGCCAACCCCGCGTCCATGCTCCAGCAGACGATGATCTATCCGGGCGCTTCGCCGGCGAGCAGTAGCGCAAGCAGCGGTAGCTTGCAGACCTCCTTCGCCAGCATACTCTTCACGGGCCTGCCGCCCCACCCGCAGATGGCCCCGCAGCACGCCCCTCAGGCCGGAGGCCAGGCCCCCGCCGTTCGGGGGGCGACTCCCTCCGGCGAGCTGATAGACCCGGCCAGGGACCCGGCCATCTACTCGACCCTTCTGCCGAGGCCGGGAAGCAACGACAACTCCTGGGAGAGCCTCATCGAAATCACCAAGACCTCGGAGACGTCGAAGCTGCAGCAGCTGGTCGACAACATCGAGCACAAGCTGACCGACCCGAACCAGTGCATCATCTGCCAGCGAGTGCTGTCCTGCAAGAGCGCCCTCCAGATGCACTACAGGACGCACACCGGCGAGCGGCCCTTCAAGTGCAAGATCTGCGGCAGGGCCTTCACCACCAAGGGCAACCTCAAGACTCACATGGGCGTGCACAGAGCCAAGCCGCCCCTGCGGCTGCTGCACCAGTGCACCGTCTGCCACAAGAAGTTCTCCAACGCCTTCGTCCTGCAGCAGCACGTGAACCTTCACACAAACGACCCCACGGAGCTCACTCCCGAGCAGATCCGCGCCGCCGAAGTTCACGACTTCCCGCCGGGCTACCCGCAGCACCCCCTGGCGCCCTTCATCTCCCAGGGTTTCCCGCCCCTCTACCCGGCGGCCTTCCCGCTCAACTGCGCCCCGGCCGCTAGCCTGCGTCTGAGCAGGCCACAGTCCCTGGACAACGATGTCGACTCGAAGGACTCGATGCaacagcagcatcagcagcagctccAACAGCTCCACCAGCAGCGATACATGGAGGAGCAGGCCGGCGAAGAGGTCGAGGACGTCGAGGACGAAGAGGAGGACCGACGAGAGGACGACGAGAGGTGCGAGGAGGCGCGCGAGAGGCGAAACAGCATGGAGACCGAGGAGGACAAGGAGCACGAGGCCGAGCAGGACGTCGACCGCAAGGATCACATCCTCTCGCCCTCGTCCTCGAtcccctcctccttctccaCCTCCCTGGCCGCGCTCGAGAGCCAAGCGCGCGCCATCACGACGATGGCCAACCACCACGGCCTCTCCGGAGCCAAGTCGCCGCCGATGCCGGCGCTGCACCGCTACAACGGCAGTGAGAAGAGCAGCAGCCCGCCCGGCGCGGTCGCCTcctccgcggccgcggcgcctCTGGACCTGACGCCCCGGGCCTCCTCCACCCCGGCCTCCGGGTTCTCGGCGCCGATCTCGCCGCCCGGCTCGCACAGCCAGCACAGCAACCCGCAGACGCACCACCCGCCGCACCCGTTCGGCATGTTCGCCGGGCTCCTGCAGGCCGTCTCGACGGCGGCGCCCACGACCGGCCTGAACAGCGCCTCCGCGGTCAGCCCCGGGCCGGGCATCGGGCCCCTCGCCTCGCTGACCAGCTCGGCCGTCCGGGCCGCGACCTCGACCTACAACCCGCTGGGTCTGGCGGTTGGCGGCTCAGCAGTGCGCGGCAACACCACATGCAACATCTGCTTCAAAACGTTCGCGTGTAACTCGGCGCTGGAGATTCATTACCGGAGCCACACGAAGGAGCGACCTTTCAAGTGCTCTATCTGCGACCGGGGCTTCTCCACGaagAGCGACGGCAGTTTGGAGAAGCCAAAGTGCAAATGCGCGGAGCGCGCCAGGCGAAGCGCCCGTGAGAAGGCGCGCAGGAGACGGCGGGCCGAGGAGCGCCGGGGGCGGACTGGCCTCAACTTAGACTTAGCGGGGCGGGTAACGTCCACCTATGCGGCGTCCACCGTCTATGGGGACGCGAGCCGCCGCCTGCCCCCGCTCGGGCCGTCCGCCCTCGGGCTGCTGGCTTCCGACCCCTCCGTCCTCCTGGGTAACATGAAGCAGCACATGTTGACGCACAAGATCCGCGACATGCCGCACCACCTGTTCAGCGACGCCAAGCCACCCACCGGCCAGCAGCAGACTCAGCAGCAGTCGCCTCAGCAGCAGCCGCCCCCGCCTCCGCCGCCCCCTCAGCAGCAGCTGCTTCCGGCGAGTCAGCCGCTGCACGAACACctacagcagcagcaacagcagagGGAGCAGTCCAGGAGTCCGGCCTCGGCGGACGAGTCGAATCTGCCGCCCCCGCCGCCCCCGCCGATCTCCTCGGCCTCTCAGCCGCCGCAGCAGCCCCAGCCTCCGCCCCCGATGGACGCCCCCGGAGTGCTTTCGGTCAAAAAGAACCTGACGGACAACGACCTCACCGCGCCGAAAAGGCCGCCCAGCATGCCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCGTCCTCGGCGCTCCAGATCCACATGAGAACACACACCGGCGACAAGCCCTTCCAGTGCACCATCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTCAAGGTACACATGGGCACGCACATGTGGACCAACGGGGCGTCACGGCGCGGCCGCCGAATGTCATTGGACATTCCGTCGCTCCCAATCACGTCCAAGGACTCGGAGTTCCTGCAGCGCAGGCCGGATCTCTTCTATCCGTACCTACCCGCGCCATTCCTTAACGGAGTGCCGCAAAAGCTGAACGAGATGTCGGTGATCCAGAGCAGCAACGGGCTGGCCGCGCTGCCGCCGGGCGGGCACCCGGTCGGCGCCGGCAAGTACGCGGGCCTCTTCGGCTCGGTGTTCGCCGCGGGCGCGGGCTTCCCCACTGGCCCCGAGGGCCCGAAGCCGCCGCAGACGCCGCCGCAGGACATGTCGGGCTCGCTGCTCTTCCAGTCGGGCCGCGGCGCCGCCTCGACGCCGCCCTCGCCCGCCCACTCGCCGCCCGGCGCGCCCTGGCCCGGCAGCGTCGCCGCCGAGGCCATGCAGCGACACCActacgccgccgccgccgccgcagcagcagcagccgccgcggccgcggcccagcgcgccgagagcgacggCTCGCCGCCCgcgaggctgccgccgccgccgcctgcgcCCAGGGGCGAGGGCCTCGCCGCCTAA
Protein Sequence: MQLMRWSITRRLESRGEKQRRDARICQPDTPEARLSYSRFSGEDNESASDGEESAGGGAMGDEAVDLTSARSHHEDELEPEDRSLPAEMPEDEDEEPDEPEDFESAKKLAGSPDPDDEPSHKHERLCQDAENNNSFVEGGPAAAGVIPAAPTSHVTLEALENTKVAVAQFAATALAGGADSEAAFQDLAVLQSTLFTLQHQQVFQLQLIKHLQQQLHGGAQPPEGPAPDSKEASPSPAALIQPKPLSSLTSPQQSRPPSLLQQPSPSSTPAAPATADRQTPPGGASPLGAALAAVPSATPPASAAQPPSHQVPALCSISSSLASSIITNNDPLPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGGSGGKGSRLSPYDGKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHREKFPHVKMNPNPVPEHLDKFHPPLMLSSGSYGPRGMVSPPPPPLPPMPPHSSAGVPGPPPGAPPGFHADAFLPPPQPPLSLALGLPPGIPPALYRSPLLNSVTAHREDQDAPADLSKPQPPAASTPTTPSHSVTHSPAQSPNPHHSFNKHCQQQKIQQQDELVKMEQDPSPAGGEYHHRPPRSISREAPAEGITPKNEPEDTEELNEEEPEEFEDPSRRYMNSSPSSANQASSVHQQIYEDCSMESKVSGRLEAEGADMECDDDMDEQPENLSNRANPASMLQQTMIYPGASPASSSASSGSLQTSFASILFTGLPPHPQMAPQHAPQAGGQAPAVRGATPSGELIDPARDPAIYSTLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCIICQRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRLLHQCTVCHKKFSNAFVLQQHVNLHTNDPTELTPEQIRAAEVHDFPPGYPQHPLAPFISQGFPPLYPAAFPLNCAPAASLRLSRPQSLDNDVDSKDSMQQQHQQQLQQLHQQRYMEEQAGEEVEDVEDEEEDRREDDERCEEARERRNSMETEEDKEHEAEQDVDRKDHILSPSSSIPSSFSTSLAALESQARAITTMANHHGLSGAKSPPMPALHRYNGSEKSSSPPGAVASSAAAAPLDLTPRASSTPASGFSAPISPPGSHSQHSNPQTHHPPHPFGMFAGLLQAVSTAAPTTGLNSASAVSPGPGIGPLASLTSSAVRAATSTYNPLGLAVGGSAVRGNTTCNICFKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKSDGSLEKPKCKCAERARRSAREKARRRRRAEERRGRTGLNLDLAGRVTSTYAASTVYGDASRRLPPLGPSALGLLASDPSVLLGNMKQHMLTHKIRDMPHHLFSDAKPPTGQQQTQQQSPQQQPPPPPPPPQQQLLPASQPLHEHLQQQQQQREQSRSPASADESNLPPPPPPPISSASQPPQQPQPPPPMDAPGVLSVKKNLTDNDLTAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFQCTICQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDIPSLPITSKDSEFLQRRPDLFYPYLPAPFLNGVPQKLNEMSVIQSSNGLAALPPGGHPVGAGKYAGLFGSVFAAGAGFPTGPEGPKPPQTPPQDMSGSLLFQSGRGAASTPPSPAHSPPGAPWPGSVAAEAMQRHHYAAAAAAAAAAAAAAAQRAESDGSPPARLPPPPPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01111228;
90% Identity: iTF_01110392;
80% Identity: -