Oros005882.1
Basic Information
- Insect
- Ormyrus rosae
- Gene Symbol
- ZFX
- Assembly
- GCA_035047165.1
- Location
- JAWWML010000032.1:318993-324755[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.2 2.6e+02 3.2 0.1 3 23 19 39 18 39 0.94 2 15 3.6 4.2e+02 2.6 3.3 1 19 999 1017 999 1022 0.75 3 15 0.23 27 6.3 3.0 2 23 1108 1130 1107 1130 0.95 4 15 0.0012 0.14 13.5 0.4 2 23 1143 1164 1143 1164 0.98 5 15 2e-05 0.0024 19.1 3.1 2 23 1167 1188 1166 1188 0.97 6 15 0.011 1.3 10.5 0.3 1 23 1194 1216 1194 1216 0.95 7 15 3.3e-05 0.0039 18.4 4.5 2 23 1223 1244 1222 1245 0.95 8 15 0.15 17 6.9 3.7 5 23 1258 1276 1257 1276 0.97 9 15 3e-05 0.0035 18.5 1.5 3 23 1283 1304 1282 1304 0.97 10 15 0.013 1.6 10.2 0.3 2 23 1320 1340 1319 1340 0.97 11 15 8.9e-05 0.011 17.0 0.7 1 20 1346 1365 1346 1368 0.92 12 15 0.00011 0.013 16.7 2.7 1 23 1376 1398 1376 1398 0.99 13 15 0.0031 0.37 12.2 3.2 1 23 1404 1426 1404 1426 0.97 14 15 5.4e-06 0.00063 20.9 3.8 1 23 1432 1454 1432 1454 0.99 15 15 0.0004 0.047 15.0 7.2 1 23 1460 1482 1460 1483 0.96
Sequence Information
- Coding Sequence
- ATGGACCTCAGCTCGAGCATGAGTGCCCTGTCAGCAGGGACGGGAGCAGTGGCCTGTCCGGTTTGCACGCTGTATCTGCGCGAGGGCATCAGCTTGCAGAAACACTTGGACACGCATCCGAAGGAGCAGGTAATCGAGGCGTTGATCCGCGCGAGCGCCGCCGGTGGAGCCGCGGCTCTGCTCGGACAGGTAACTCAACcacagccgcagcagcagctgtCGCATCAGCCGGCGACGACCTCGGCAGTCGCGGCCGCGCCGCCGACCCCGAGCCCCGGCGCCGCgcctcagcagcagcagccggcgaCACCTTCGCCCAGTACGCATGTTCCTCACGCCCAGTCGCCCTATCCGATTGGGCCTATCTTTGAGTGCCCGCCGATCAACGCCATGATTCCGCCACCACAGTTCGCATCCTTTAGCTATCAACAGTTTGTCAATAATGGTACAATGATGATACCTGCACAGTATGCGATGCAAGCCCAACCACCACAGACCAGTCAAATGATGCAGATGCTGTACAGCCCTTACGGTATGTACCATCAGCAACAGATTCCCACGGTCCAAATGATTTCGGCACCACCGATGATCCCATCAACGACATCAGCTTTACCAACGACGGTTCCGGCTGTGACGACACGTATGAGACCCGCGACTAGTAACAGCAACGTCTCCATCACAGCTGTGAGTGAAACAACGACTCCAACGGCATCGCCGCCAAGATCGTCGCCTCCAATATGTTCGCAGCAGTCACCGCAAgcgcaacagcagcagcaagatGAGATCATTACTGAATCTACGAGACACACGATCATTCAGGAAATAATACCAGGGCCAGATCGAATTTTGCCGGACTTGGATGCTCCTTCGACGCCTGAGACAACGCAACCTGAAGGAGAGGACGACAGCAGTATGCAGATTGAACAGCAAGAGAATGAGTCTCCTAACTCTTGCATGCGGGAAGAAGAATCACACATCGTCGAACAATGTCAGACggAGAATCCGCCAACGTTGATCAGTAATAATTCTGAAGACGAAAATGCTGATGATGACAAGACTGAAAGTATCCTTCCTGATATAGAAGATAATCAAGAAATTGAATCTTTGTTAGTTCGAAATACAAACAGGGTAGAGAAcgacaaaaataatgaaatacaagTAGAAGAATCTGTTGAACAGTCAAAAACCtcgattcaaaaagaaaacgcaGAAAAAGAGGTAGTAGAAATTGTTCAAGATAGTAAAGTAGATAATCATAAAGAGTTGGCGGAAAAATCTCAAGATTTAGAAATGGTCACGGAGATTGAACAACCCGAAAATCTCTCTGTTGATCTTCCTATTGCAAATAGCACTTAttctgaaaaatcaaaagtcgAACAATTAAGTCGGTTACTTGGAAACATAGAATCGAACTTTAGTGACGTAAATTTAACAGTTAACGAAAAAGTGGATAGTGTCGAGAAACCTTCAGATGAAACTCAAAAAGCCTTGTTGGaagaaattccaaaaaaaccAAGTGAAGAAGATGAAAACACAAATGCTTCATACCGTAAAACGACGCCTGAACCAATCGAGTGTAAGATTATTGTTGCACATGACGATACGGACGTATCATCTGTTACCTCTGAAGATTCAGTTCATTGCGATTTAGAAATCCAAAAGATTAATACCATTTCTTATCAATATAAGTATTCTCAATCCGCTCCCTCGAGTCCAATTACAAAGAAGAAGCTGCAACGTTCCTTATCGCGAATTTCTCTGCGTTCTGATTTTGATCGATCGAACGAAAACATATACCCTTACCCGACAAACTTTAAGCCCACCTCGCTTGCAAGTTTCCTCAAAGATAATTACAATGACGAGGATATGGAACTTGAGGAGACAGAACATGACGCTTATATGAAGCAAACTGGCGGCATGATTGTTGAACGTGTAAGATCACACATGTCCTTATCAACCGATGTCAGTGGAGTATCCGTATTAAAAGCAAGACGTACTAAAGTCGCTGGTTCACCTGTGTCCCTACATTCTTCTTCATCTTATTGTCAAACACTTGAAGACGATGAAGAAGATGATTCGGATGCGGATAGCTGCATGAGTTATCGTGTGCATGAGAAGGATGATGACGacgaagaggaagaagaagaagaagaagaagaggaagaagaagaagaagatttGTTAGACGAAAAGAGCGGTCATTTAgtgggaaataaaaaaaataaaactgcaacCACTTTGGAAATAAAGACCATCTCAGAACAGCAACAACCGGCAGACTTTCGAACTCAAAATCTTATGATCGATCATTATTCGTCTGCTCAATTTCCAATTGATAATCGACCGTCTCAAATACCTCAACAGCAATCTTCAGAAGTATCAGTACACGAGACTTATCCATTGTCTAATAGTGGCATTTcccaaaatttaataaacatatctGAATGCGTGGATCCAACGACGAGTACGGATTCAAAAAGTTATTCTAGTTCCAACAAGTCGGTAGTGCAGAAACCCTCAACAGaactattaaatataagtGAAGATGCGCACGCAGGACCTAtgaatgtttttgaatttgacgGTCTGCAAATACTTGTGCCCAGCACATTTATCAGCGAGTCATCGCAGAAAGCTGTAAGCGGAACAAGCCAACAATCATTATCAAGCAGTGAGAACGGGGCTGGAAACGATGAAGAAGTAAAAAGTGTGAATATGAGAGCAGACGAAACAATGCCACCTAGAGGTGAATTGTCCGAACAGGAAAGTAATGGTTGTACAGAACCCTCAGCTTGGCAGTTATATATGGGACAAGAATCTTCGCGTATGTCAACGTCTTACGATCTGATGGCACGTGAAAGTTGGGAAGAATCTGAAGGTTCGGATCACGAAGACAACAACGGTGGTCCTTTACTCGATAGCCGTTCTCTCGCAACTCATTTCACATCGAGTCTTTTTCTCGACAGAGACCGTAAAACACCCACACGCCGCATCTTTAAATGTACTCACTGTTCAGAAGTGTTTGACTGTCCAAAAGAGCGGCGTGTCCACAGCACGATGGTCCATAAAGAAGCTGGTCCTTCCAGTAGTAACGATAATATGGATCAACAAGAACTCAAGGATATAAAGTTGTTGGAAGGACGCGCTAACGTTTTCGAAGAAATCTTCGTTCCTAGTGGCCTCCATGTACAACCAACGTATCAACACCATCCACAGCCGCTGCTACACCAACTTCAACCACCGCAACATTCGGGCTCGACGAAAGCCGAAGGGGACGTCAAGATTGACTCTCTGCATCATCTGTCAGCAGTGACTGAAGTTACGTGTCCCTTGTGCAATCAAATCTTTAGCTGTGATAAGTCCTTGCAAATTCATCATAGACGTATTCATGTATCTGATCCCGTAAAACGTATTCGTGAAAATGCAAAATGCCAGATTTGCAACGAGGAATTCACATCCGTAGCGAGCTTTAACATGCATCTTAAAATTCATCCACTCGAGTGCAGCCAATGTGGCAAGTACTTTTATCGCAAGCAGAACTTTAAGCTCCACATGAAGCGGCACTTGGGAATAAAACCTTTTCCTTGTTCCATTTGTGACAAGGCTTTCCTTACTAAGCAAAAGTTGGATGAACACACAAATGGTCATACCGGAAATGCCCCCGTCAAGTGCAATCTCTGTAATGAGACTTTTAGACGATATTCAAATCTAACGCAGCATAAGAATCGCCATCATCTAAACATCAAGAAAAAACTTAAAGATTATATCTGTCATTGCGGCGAGGTGTTCcatacgaaaaaaaagcttgcTTGGCATAAGGAGACTCACGATGAGAAGCCTAAAGCTTGCACTTACTGCAATGAGCGTTTCATACACATGGCCAGTTTAACGCGGCACATGCGTCGAGCTCATAACAGACGTTTCGTGCCGGACGCGCAACGAGAAAGCGAAAATGTCGAGTGCCCTATTTGTAAGTGTATCTATCTGAGATCATCGTTGGCAGTTCACATGCGCGTTCATAATGGCGAAAGGCCCTACGAGTGTCAAGTCTGCTCAAAGGCCTTTAGTACCAAATGGAATCTTCAATTGCACAAGTGGACACACGCTGCTCGTAGTACCAAACCGTTTAAGTGCAATCAATGTAGTGCCGCCTTCTACAGACATAGTGACTACACGGCACATATGAACTCCCATCGAAATGTGAGGCCGTACACCTGCAACTATTGTGGAGCCCAGTTTATTAGGAAATACAATTGCTTACGACACGTAAAAGAACACGAAGAGAACAAACAGTATACTTGTGAAGTATGCAACAAGACCTTTCATAGGTCTTATTATCTTAAAGAGCACTTGCGCGTACATTCGGGTGCAAGACCTTACACTTGTCACATTTGTGGCAAGTCTAGTAGCACAAAGTCTAATCATAATAAGCATGTCAGAATTCATCATGCACGCGAGCCTGTAAATACAGAGAGTTAA
- Protein Sequence
- MDLSSSMSALSAGTGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASAAGGAAALLGQVTQPQPQQQLSHQPATTSAVAAAPPTPSPGAAPQQQQPATPSPSTHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMQAQPPQTSQMMQMLYSPYGMYHQQQIPTVQMISAPPMIPSTTSALPTTVPAVTTRMRPATSNSNVSITAVSETTTPTASPPRSSPPICSQQSPQAQQQQQDEIITESTRHTIIQEIIPGPDRILPDLDAPSTPETTQPEGEDDSSMQIEQQENESPNSCMREEESHIVEQCQTENPPTLISNNSEDENADDDKTESILPDIEDNQEIESLLVRNTNRVENDKNNEIQVEESVEQSKTSIQKENAEKEVVEIVQDSKVDNHKELAEKSQDLEMVTEIEQPENLSVDLPIANSTYSEKSKVEQLSRLLGNIESNFSDVNLTVNEKVDSVEKPSDETQKALLEEIPKKPSEEDENTNASYRKTTPEPIECKIIVAHDDTDVSSVTSEDSVHCDLEIQKINTISYQYKYSQSAPSSPITKKKLQRSLSRISLRSDFDRSNENIYPYPTNFKPTSLASFLKDNYNDEDMELEETEHDAYMKQTGGMIVERVRSHMSLSTDVSGVSVLKARRTKVAGSPVSLHSSSSYCQTLEDDEEDDSDADSCMSYRVHEKDDDDEEEEEEEEEEEEEEEDLLDEKSGHLVGNKKNKTATTLEIKTISEQQQPADFRTQNLMIDHYSSAQFPIDNRPSQIPQQQSSEVSVHETYPLSNSGISQNLINISECVDPTTSTDSKSYSSSNKSVVQKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSLSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEPSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHEDNNGGPLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCTHCSEVFDCPKERRVHSTMVHKEAGPSSSNDNMDQQELKDIKLLEGRANVFEEIFVPSGLHVQPTYQHHPQPLLHQLQPPQHSGSTKAEGDVKIDSLHHLSAVTEVTCPLCNQIFSCDKSLQIHHRRIHVSDPVKRIRENAKCQICNEEFTSVASFNMHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCSICDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKQYTCEVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113664;
- 90% Identity
- iTF_01110388;
- 80% Identity
- -