Opom001569.1
Basic Information
- Insect
- Ormyrus pomaceus
- Gene Symbol
- gata4
- Assembly
- GCA_900474385.1
- Location
- UCOM01001392.1:26404-37567[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-17 6.6e-14 51.6 3.2 1 34 176 208 176 210 0.97 2 2 3.5e-17 9.9e-14 51.0 2.9 1 35 230 263 230 264 0.98
Sequence Information
- Coding Sequence
- ATGGGCAGATTTCATTTGGAGGAAGTGGACGATTGTGCGTATCGTCTTGGCAGTGTTACCGGCCTCGTAGCTGGTGGCATGACTTCCAATTTCATACCGTCTTACTTAAACCCATCAGAGCAGCAGTTATGGCCGAATCAAGTCTCCGGCCTGAGCTGCCAGCTACCGGTGAACGACGACTACGGGGTGGTGAGCAAGTCCTCCCCGGCGGTGACTCACCCGCCCGCCCTGCCGACCTTCTCCCAGCCGTACGGGCAGCGCTTCCGCTACAACCCGACGTACGCGGGCATGCAGCAGGGCAACCCGGCGACGGTCGCGGTCGCGGACTCGCACTCCCCCGCCTGGTCGGCGTACCCGGGCACGGGCCAGACCCTCGGAGGCCCGGACTACGTCACGGCCAACGCCGCGGTCTCGGCCACCGGACGAAGGACGACCGCCTGCGGCGCCCAGGCGCAGACCCAGGCGCAGCATCCGTTCGGTTCTGCAATGACCATCGACGCCGAATACTTTACGGAGGGTCGTGAGTGCGTTAATTGCGGGGCGGTGTCAACTCCGCTCTGGCGACGAGACGGCACCGGTCATTACCTCTGCAACGCATGCGGACTGTACCACAAGATGAACGGCATGAATCGGCCACTGGTTAAGCAATCACGGCGAATGTCAGCCTCTAGACGAAACGGTCTATCTTGTCATAACTGTAAAGCAGTGAGAACATCTCTTTGGCGCCGGAACAGCAACGGAGATGCAGTTTGCAATGCTTGCGGTCTTTATTTCAAGCTTCACGGGGTGAATCGACCTCCTTCCATGAAAAAGGACAATATACAGACGCGAAAACGCAAGCCAAAAAAGATGCCCGATATTGCAGCTTGCAAcgttaataataacaataataacaacaacaataacaatacGCTGAAGCTGGAGCctgATAACTACAACGATTTACGGATAAACCACGTCAACAACGTCGTACAAGCGGCCTACGCTTCAAATCTATACGGCTGTCAACCCCAAAGTCGGATAACCGGCATCTACCAgccaaatatttattacgacgtatctcagcagcagcagcagcagcaacaacagcagcagcagcagcaacaacaaaaTCACCTTTTGGAAAACGATCCTTCACCAAAACTCGAGTGCGCATCACCGCAAGGTGCCACGCGCTCACCGGTACTCGTCTCAGCGAGCCACTCGCCTGATCACCACCAGTTGACTTCCTCCTCGTCGCCGCACATCGTTTCCCTTAACAATTCTTCACCGGGGCCCAATAACAAACTTCTCATCGACACGATCGATCGGCCGACTGTTGTTTCCATATCCTAA
- Protein Sequence
- MGRFHLEEVDDCAYRLGSVTGLVAGGMTSNFIPSYLNPSEQQLWPNQVSGLSCQLPVNDDYGVVSKSSPAVTHPPALPTFSQPYGQRFRYNPTYAGMQQGNPATVAVADSHSPAWSAYPGTGQTLGGPDYVTANAAVSATGRRTTACGAQAQTQAQHPFGSAMTIDAEYFTEGRECVNCGAVSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQSRRMSASRRNGLSCHNCKAVRTSLWRRNSNGDAVCNACGLYFKLHGVNRPPSMKKDNIQTRKRKPKKMPDIAACNVNNNNNNNNNNNTLKLEPDNYNDLRINHVNNVVQAAYASNLYGCQPQSRITGIYQPNIYYDVSQQQQQQQQQQQQQQQQNHLLENDPSPKLECASPQGATRSPVLVSASHSPDHHQLTSSSSPHIVSLNNSSPGPNNKLLIDTIDRPTVVSIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113873;
- 90% Identity
- iTF_01113873;
- 80% Identity
- -