Opom004176.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ormyrus pomaceus
Gene Symbol
-
Assembly
GCA_900474385.1
Location
UCOM01000368.1:68547-78306[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.031 3 8.8 2.0 1 23 90 113 90 113 0.95
2 28 0.13 13 6.8 3.5 1 23 394 417 394 417 0.97
3 28 0.00049 0.048 14.5 1.0 1 23 449 472 449 472 0.96
4 28 0.93 91 4.2 1.3 1 23 487 510 487 510 0.96
5 28 1.4e-05 0.0014 19.3 3.2 1 23 516 539 516 539 0.96
6 28 0.0012 0.11 13.3 4.1 2 23 545 567 544 567 0.96
7 28 0.0059 0.57 11.1 0.4 1 23 572 595 572 595 0.97
8 28 6.7e-06 0.00065 20.3 0.6 1 23 601 623 601 623 0.98
9 28 0.0002 0.019 15.7 1.6 1 23 629 651 629 651 0.96
10 28 5.9e-05 0.0058 17.4 1.8 1 23 657 679 657 679 0.98
11 28 1.5 1.5e+02 3.5 0.3 2 23 931 953 930 953 0.90
12 28 0.068 6.6 7.7 0.8 1 23 965 988 965 988 0.96
13 28 0.09 8.8 7.4 3.5 1 23 1003 1026 1003 1026 0.93
14 28 0.00032 0.032 15.0 5.8 1 23 1032 1054 1032 1055 0.95
15 28 0.52 50 5.0 1.1 3 23 1062 1083 1060 1083 0.94
16 28 0.0031 0.3 12.0 0.4 1 23 1088 1111 1088 1111 0.96
17 28 7.2e-07 7e-05 23.4 0.4 2 23 1118 1139 1117 1139 0.96
18 28 2.3e-06 0.00022 21.8 0.4 1 23 1145 1167 1145 1167 0.97
19 28 7.9e-05 0.0076 17.0 1.0 1 23 1173 1195 1173 1195 0.98
20 28 0.0053 0.51 11.2 0.5 1 23 1346 1369 1346 1369 0.95
21 28 3.7e-05 0.0036 18.0 1.5 1 23 1371 1394 1371 1394 0.96
22 28 0.85 83 4.3 2.7 1 23 1400 1423 1400 1423 0.90
23 28 0.00018 0.018 15.8 0.6 1 23 1429 1452 1429 1452 0.96
24 28 4.5e-05 0.0043 17.8 0.3 2 23 1459 1481 1458 1481 0.93
25 28 0.0017 0.17 12.8 0.6 1 23 1486 1508 1486 1508 0.96
26 28 2.5e-07 2.4e-05 24.8 0.3 2 23 1515 1536 1515 1536 0.97
27 28 0.00033 0.032 15.0 2.9 1 23 1542 1564 1542 1564 0.98
28 28 7.9e-07 7.6e-05 23.3 0.5 1 23 1570 1592 1570 1592 0.98

Sequence Information

Coding Sequence
ATGGGACAACTCAAAAGATTTGGatcAGTGATAATAAAGGACAGCAACGGCAAGCTCATTCGAATTCACTGCAGGCAAGTGATCGACGACGAAGGTAACCTGTTCGAAGCAATAGTTCCTCCCTCAAGCATAATTCCAAAGAGCGAGTCGGAGCAGGACTTTCAAGGTGACGATGATGACTTCGAGGAGGTAACGATCGACGGGGTCAGCCCCTCTGTTGCTGCAACGCCTATCATTCCTGAATCGCGGCCTAAGAACTCGACTGTCTTCATGTGCAAATCGTGCAAGATTTTCTTCCCGGTGAGGCATATGCTAGAGAAGCATACCAAGGCTGTACACAAAATCAGCTCGCCGAGCGCAACCAGGAAGCGCAAGCCAAGCTTCCTTGAGCGGATGAAAGAGAAAGCCGCTGGTTACCGCAAAATACAATACAGTAATAAGTATGGATGTAATTACTGTCTTTTCTTGACATTTGATAAAAGTGTAATGGAAAGGCACGTTAAAAGAAGACACTCTGATAAAAAACAATCAGTGGCGGTGAAAACTCCCTCTGTTGTGGTGGTTATTGAAAGCGCtaatgaaatcaataatatGCAAGAAGAAGAGTTTGAGGAAATGAAGCTTGAGCCAGAAGTGACGGTTGTAAAGCAGTCGATTAGAAACGAGACAGATTTAGTAGAAGGTGACATGGAAATGATTGAAGCAGAAGGAATCGTCGGTGACGTTCTCGAGGATGAAAGCATGAACATAGAAGAAGTAAATGTCGAAGATCCAATTTCAATTGAAAGTGAAGTGTTTCAAATAGATAACGAGCAACAAATTTCAGcggaaaatttagaaattattgaaaacaatCGCCTACTTCAAGTTGAAAACGAAGAACTTATTCAGGACGTAAATGAAGAACTAGTTCAACACGAAGTATTTGTGCAAAACGAGGAACTAGTTCAAGCggaaaatatagaatttcttCATGTTGACTGCGAAGAAGTAATCGAAGCAGATAACGAAGTACTGATTCAAGCAGACAACGAAGTCCTGATTCAAACGGAAAACGAAAACTTTGCAGCAGAAAGTCAAGATCTCGTTAATGAACAAAACATACTTACAGAACAGTTTGGAGAAGAACTCAGTTCAGATGTATGGACAGAGGAGGATGGAGCAAAAAAAGGTGAGCTGTACACTTGCCCGTACTGCAACTACGACGGGAATACTCGTACAGCGGTGCATAATCATATCCAAAAATGCCACTACGATGAGTGGATCGCCGCAATCGCTCGAAAGGATCGACGAAAAAAACCTTACAAAAAGCCAGAGTTTCAATACGGACCGAAGGTTCGTTCGTTCCCCTGCGGATACTGTGATTATGCGGCGACGAACAGACCGAATCTCAATTCGCACATGAAACACAAACACCCCGAAATTGAGCGGGAGCCACGCCCCAAGCAGACTACGGAATTTCAGTGCGATCTATGCGAGTTCAAGACAAGGGAGCGacgcaaaattcaaattcacaTCGAAAGGAAGCACGTTACCGAGAACCGATATCCCTGCGAGTACTgcggtaaaaaattcaaggttAAATGCGACCTGACTTCTCACATTCGTTTCCAGCACTTGAGGGTTCCGTGCGTGTGCGACGTGTGTGGCAAGATTTGCACTAACAGCAACGCCCTGCACGTGCACCAGAAGCGCGAGCACTACAAGCCCGAATTCGAGTGTCAGATCTGCAAGAGAAGGATGGTTTCGCAAGAGAATCTGGACGAGCACATTCAGAGGCAGCACGAGCAGAGGATCAAGTACATGTGCGAGCAGTGCGGTAAGGTTTTCGACCAGCCCAATAAGCTCAAGCAGCATTCTATGACGCATACGGGCGAGCGACCGCATATCTGCCACCTGTGTGGAAAGGCTTTTGCCAGAAGAGCCGTGTTTAGGCAACACTTGTTAATTCATACGGGTCAGAAACCATATACGTGTGATATTTGTGGAAAGAGTTTTACACAGAAGCCGGGACTGATCTGTCACAGAAAGATGCACCCAGGTGAAAAGCCTCCTTTGCCTGTAGTTTATATTGATCATATCCTTGATAAGTCAGAGAAGAAGTCAGCGAACCGAGCCATCTTCCTCTTCGGGCGAGAAGCGCTGGTGATGCGCAAGTGGCAAATCCTGGAGTTCGACGGCAATCCCTACTACGCCTTCGTGCCCGAGGACGACGAACCGATCAAGGAGGAAGCGATTCCCGAGCTCCAGGAGGAGTCCGCCGCTCTCGAGCAAGAGCTAAATGTCAGTCAAGAGAGCGAAGATAGGAAGGAGGAGGATGAGCAGGATTATAAAGCCGATAATCGCTCGGTAGACGAAGAGACGGTCCCTGAAGAGTACATCGAAAGGCTCGAGGAAGAAATCGAGGAGCAAGATATCAAGCCTGCCATTATCAATGGAAATCTGCAGGCTCCGGAAAGCCAAGAAGCCGagaacgaggaggaggaggaggaggaacaGCAAGTCGACAACTCCCAAGCAGAGGTGTACCAGGTGAAGGTCGAGGGCGGCGTGGTCATGCTCGAGAAGCTCAATGTCGAGGCTATAGAAACGACGGACCAAGATGAAGGTCATACTGTCCTGCTCGCAGAAAGCGGGGATCATCCAGACGAAGAATCCCAGGACGCTGTAGGCTTCGAGCAagaagacgacgacgaggtcGTAGCTACCATTGAGGAGGACGTCGTCGAGCCCGAAGAGACCGAAGAATTCCGGGGCACCACCTCCAAAACTGGCAGCGGCGGATCGCTCAAATGCAGGGCCTGCTCAGAGACGTTCGAGTCGACGCTGGCCTTCCGCAAGCACGTTGCTTGGACGCACAAGAAGAAGGTGTGCATCGTAGAGGACGGTGCCTACATCTGCTCGGTGTGCGACTACCGAACGTTAAAGAAGAGCCAATTTGCGGCACATCTGCAGCGCCAGCACGAGACGTGGCAGCGTAAGCGACAGAGCTCCTCCTCGGCGATGTTTCCCTGTGCCGCCTGTGGCTTCGTCTGCCGTTCTAAGCACTCGCTCCAGTCGCACTTTATCCGCAAGCACACTGATCGCTACGAACACCAGTGCAAGTTCTGCCCCAAGAAGTTTAAAGTCAAGGGCGACCTCACGAACCACGTGCGCTTCCATCACAAGGAGAAGCCTGTGCACTGCGACGTCTGCGGAAAACTCTGCTTGAACAGCGGCTCGCTCTACGTGCACCAGAAGTGGGCCCATTACAAGCCCAAGTTCGAGTGCACCATCTGTAAGAGAAGGATGGTCACGCAGGAGAATCTCGACCAGCACATGGTGATGCAGCACGAGAAACGGGAGAAAATCGTCTGCGCCGAGTGCGGCAAAACCTTTACTAAGAAAGATTCTTTCAAGAGGCACATGGCAGTGCACACTGGGAACAAGCCCTACAATTGTGTAATTTGCAACAAGCCCTTCGCCAGGAGGTCGCAGCTCAGGCAGCACCTCCTTATTCACACGGGCAAGAGGCCCTTCGTCTGCGACATCTGCGGCAAGGCTTTCACCCAAAAGCCTGGGCTTATATGTCACAGGAAAACTCATCCCGGAACGCATCCGCCCCTCCCGGTTATGCCGATCGGTGATATTGTTAAAGAGTTCACCGAAGGATTCTTGAAAAACCATCCTCAGGGCGCTGAACTCGGAGAGGATCACGACGACCTCGAAgatgaggaggaggaggaagagtaCGAAGAGGAAGAGATAGATCGTGAAGAAATTGTCAAGTCCGAGGTTGTCGAGGAAGATGTGGTGCACGAAACCATGGAAGAgAGGAAGACAACGTTACGACGAGCAAGACTCCGCAGGCGTTTTGCAGCAATCTCAACGACAACGATCGGCAATCCAACGGTACGCTCCAGCAGGCGAAAACGACCGGAACCAGCTCTACCTAGTCCGGAGCGAGCCTCTCGCGTCTCTCAGCGACGACGCAACGACTTGCCCCCGAAGAAGCTCAAAATTGACGAACCCAGTCCCGAGGAGGAAGGCGAGAGGCACCCGTGCGACAAGTGCGTCGAGTGCTACTCGACCGCCGAAGCTTTAGCGGAGCACGTCCGAGCGAAGCACATATTCCAGTGCGAGCACTGCCCGGAAAACTTCCGACAGCGCAAGCTCCTCAGGCTGCACATACAGGAGGAGCACAAGCACATGCCCAAGTACGTGTGCAGCGAGTGCGGCAGCATCTTCAAGTGCCGGCAGTCGCTGCGCGAACACTTCGTTCGCAAGCACACCGAGGGCTTCCGCTTCGTCTGCGCCTCCTGCGGCAAGAAGTTCAAGATGAAGAGCGACCTGTACATGCACGTCCAGAGCATCCACAGCGAGGAGCGCGAGGTCGTCTGCGACGTTTGCGGCAAAACCTACCGGAACGCCTTCGCCCTCAAGAAGCATCTGGCGCACGCGCACAATCAGCGACCTTACGCCTGCGAAATCTGCAAGCGCAAGCTCGCCACCAAGGAGTCGCTCGAGCATCACGCCCAGCTGCACCTCAGAAAGGAGCGCGCCGTCTGCCAGGTTTGCGGCAAAACCTTCAGCGGTAACGACGCGCTGAAGAAGCACATGAGGATACACACGGGCGTGAGGCCGTTCCCTTGCAAGGTCTGCGGCAAGGCTTTCAGAAGGCAGAATACGCACAAGCAGCACTTGCTTACCCACACCGGTGTCAAGCCCTACATATGTGATATTTGCGGCAAGAGCTTTACTCAGAAGCCGGGCTTGATTACGCACAGGAAGAAGCACCCTGGACccctgccgccgctgccggcgATTTCGATAGATTACGTCATTGCTGATTTGATGGAGAAGCAGGATGCTAATAAAGGGCAGCCTGTCGATGAGATGTAA
Protein Sequence
MGQLKRFGSVIIKDSNGKLIRIHCRQVIDDEGNLFEAIVPPSSIIPKSESEQDFQGDDDDFEEVTIDGVSPSVAATPIIPESRPKNSTVFMCKSCKIFFPVRHMLEKHTKAVHKISSPSATRKRKPSFLERMKEKAAGYRKIQYSNKYGCNYCLFLTFDKSVMERHVKRRHSDKKQSVAVKTPSVVVVIESANEINNMQEEEFEEMKLEPEVTVVKQSIRNETDLVEGDMEMIEAEGIVGDVLEDESMNIEEVNVEDPISIESEVFQIDNEQQISAENLEIIENNRLLQVENEELIQDVNEELVQHEVFVQNEELVQAENIEFLHVDCEEVIEADNEVLIQADNEVLIQTENENFAAESQDLVNEQNILTEQFGEELSSDVWTEEDGAKKGELYTCPYCNYDGNTRTAVHNHIQKCHYDEWIAAIARKDRRKKPYKKPEFQYGPKVRSFPCGYCDYAATNRPNLNSHMKHKHPEIEREPRPKQTTEFQCDLCEFKTRERRKIQIHIERKHVTENRYPCEYCGKKFKVKCDLTSHIRFQHLRVPCVCDVCGKICTNSNALHVHQKREHYKPEFECQICKRRMVSQENLDEHIQRQHEQRIKYMCEQCGKVFDQPNKLKQHSMTHTGERPHICHLCGKAFARRAVFRQHLLIHTGQKPYTCDICGKSFTQKPGLICHRKMHPGEKPPLPVVYIDHILDKSEKKSANRAIFLFGREALVMRKWQILEFDGNPYYAFVPEDDEPIKEEAIPELQEESAALEQELNVSQESEDRKEEDEQDYKADNRSVDEETVPEEYIERLEEEIEEQDIKPAIINGNLQAPESQEAENEEEEEEEQQVDNSQAEVYQVKVEGGVVMLEKLNVEAIETTDQDEGHTVLLAESGDHPDEESQDAVGFEQEDDDEVVATIEEDVVEPEETEEFRGTTSKTGSGGSLKCRACSETFESTLAFRKHVAWTHKKKVCIVEDGAYICSVCDYRTLKKSQFAAHLQRQHETWQRKRQSSSSAMFPCAACGFVCRSKHSLQSHFIRKHTDRYEHQCKFCPKKFKVKGDLTNHVRFHHKEKPVHCDVCGKLCLNSGSLYVHQKWAHYKPKFECTICKRRMVTQENLDQHMVMQHEKREKIVCAECGKTFTKKDSFKRHMAVHTGNKPYNCVICNKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGTHPPLPVMPIGDIVKEFTEGFLKNHPQGAELGEDHDDLEDEEEEEEYEEEEIDREEIVKSEVVEEDVVHETMEERKTTLRRARLRRRFAAISTTTIGNPTVRSSRRKRPEPALPSPERASRVSQRRRNDLPPKKLKIDEPSPEEEGERHPCDKCVECYSTAEALAEHVRAKHIFQCEHCPENFRQRKLLRLHIQEEHKHMPKYVCSECGSIFKCRQSLREHFVRKHTEGFRFVCASCGKKFKMKSDLYMHVQSIHSEEREVVCDVCGKTYRNAFALKKHLAHAHNQRPYACEICKRKLATKESLEHHAQLHLRKERAVCQVCGKTFSGNDALKKHMRIHTGVRPFPCKVCGKAFRRQNTHKQHLLTHTGVKPYICDICGKSFTQKPGLITHRKKHPGPLPPLPAISIDYVIADLMEKQDANKGQPVDEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-