Opom010336.1
Basic Information
- Insect
- Ormyrus pomaceus
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_900474385.1
- Location
- UCOM01001672.1:1-9899[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4e-102 9.2e-98 326.8 5.8 1 218 519 733 519 733 0.91 2 3 0.62 1.4e+04 -4.0 1.6 58 81 747 760 736 773 0.34 3 3 0.057 1.3e+03 -0.6 2.8 49 103 977 1029 972 1043 0.59
Sequence Information
- Coding Sequence
- ATCTTCCTGAGGCCCGAGGTGGAATCGGCCTCGGCCCTTCAGCTAGCCGTTCCATCGGCGGCCGATTCAATGGAGTCGCTCCACGGTGAGGCGAGCGGCCCGGAGGCTACTGGCAGCAAGTGCTACGCCTTCCTCGATGAGCTAGACCAGCTGGCGACGACCCCGGCGGCTCCCATCGAGGCTACCGCTGCTCCGGTGCTCTGCGAGGACGGCGAGCTTCTCCCGGATATGGGCGGCTACGCCTCCAAGAATCCCGCCGAAGAAGATGCTAGGTTAGGCCCCTCGACGAGCGTCGACTTGCCGAAGGACCCCGAGGAATCGGCTCCCCAGCAGACGTCGACCCCCAACCCCATCCGACAGAGGCCCTCCCCGACGCTGCCGACGCCGTCGCTCTCCCAGGCGGGCGTCGGCGTCTCGGACTTCCAGCCCATCGGGGCCGAGGTGTCCGAGGAGAAGGCCCGCCAGCTCAGGAACGACGTGCGCCGACTGTCGCCGGTGCACGTGAGCCTGCGCGAGCGGACCCTCGGCGAGGTGTCGCTTACCTCGGAGGTGCCCCTCGGCGACCTGTCGGCGGTCCTCGCCGACGGCTGCCTCCCCGACGGACTCGAGCCGGGCCGCGAGAGCGAGTGCGCGAGTGCCGACGAACTGGACGACGATCTGCCGGACGCCGCGCGAGCCGCCGGCAAGAAGCGCCAACGCGAGCTCGTCATCCGCCTGTCGCGCGTCGACAGGAACAGCCCCAGCCCGCAGCAGcccgaggcggcggcgacgcccccgccgccgcctcccttCGAGCCCAGCGAGCTCCTGAAGGTGCCTTCGCCCTGTCCGTTCGGCACGAACCTGGTGCTCCAGCGCTGCGACGGCCAGAGCTTCGTCGACGGCAGCAACCCCGGCGAGTCCCCCTCGAGGAGCCTCGAGCCCAAGACGATAATCGAGAAGCTCCACATCGGCGACGAGATCGAGTTCTCGAGcccgacggcgacggcggcgagcCACTGCCGGAgctcctcgccgccgcctcccGTCTTCCCCGAGGAGGCCTCGGAGGACGACAGCTCGGAGGTGCTGGCCTcgatggcggcggcggccgccgggGTCGAGATGCCCGGCGAGGACGGACTGACCCAGGCGATAATGACGAGGCTCGAGCAGGACAGACCCGAGCCCTTCACCGAGGACTCGGCCGAGAGCCTCGCCCTGGCCGCCGGAGCGAGGGACGAGGTCAGGTCCGACGGGAGCGACTCCGGACTCGGGATCGAGATGCCCGGGGATCCGGGGGTGCCGCCGCCCGCCCCGGAGAGCGACAGCGAGACCTCCTTCTTGGACAGGATACCCGACGACATTCTCTCCGATAAGGATAAATTAGCGGACCACCTCGACGGTTTCGAACCGGAAGTGATGAGGAAGCTGAAACTGCCGAATCTGCATCTGCTGCCCGGTAAGAGCAACCTGAAACGCCGACTGACCGACTGCCTGGAGGAAGGAGAGGATCAGCAGCCCGGCGCCAAGAGGCTGAACGTCGACGGTGTCGCCTCGACTTCCTCGATGACCAAGAAGAAGCGCAACATTCAGTTCGACGCGGTCACGGTCTACTACTTTCCCAGGGCTCAAGGCTTCACCTGCGTGCCTTCACAGGGCGGCAGCACGCTGGGCATGGGCGCGATCCACTCGCACGCGGAGCGCTTCTCGCTGTCGGAGCACGCGGCGGAGCAGCGTCGACTCCACCGCGCCCGGCTCGCCCAGATGCGCTCGGAGCGCTCGAACGGCACCGTCTCGGCGGCCTCGTCGGAAGGGGCCTCGAGCTCGGAGGACCCGAGCGACGACACGGACGAGGAGCCGAGCGACGCCGAGGAGCTCGACATCGACAGCTACTACTTCCTGCAGCCGGTGCCCACCTGGCAGAGGCGGGCGCTACTACGCGCCGCCGGGGTCAGGAGGATAGACTCGATGGAGAAGGACGAGTGCAGGGACATCAGGGCCAGCAGGGAGCactgcggctgcggctgcaAGGGATACTGCGACCCGGAGAGCTGCCCCTGCAGTCGGGCCAACGTCAAGTGTCAGGTGGACAGAGCGGGCTTCCCGTGCGGCTGCTCGCGTGACGGCTGCGCCAACAGTTCCGGTCGCATCGAGTTCAATCCCGTCCGCGTGCGCACGCACTTCATCCACACGCTGATGCGCCTCGAGCTCGAGAAGAAGCCGCCGCACCACCGCAGCGACGAGGAGGCCAGCCACCACCAGGAGAgccaccagcagcagcaacaccACAGTCACCACGGCGCCCAGCAACAGCAGCCGAACCGACTGGCGGTGCCGATGGACCCGTCGCCCGCCGGCGACTGCGGCGGCTTCACCGGCCTGCACTACGACAGCCAGGACTCGGGAGCGAGAGGCGACAGTCTCGATCTTTATACGATCAGGGACGACTGCTACCCGGGCGACGATTGCCTGGGCGACGGCTCCCAGAGCCAGCAGCAGAGAAAACAGATGCACGCCGAGTTCGGCCAGGGATTTCATTACGGGGCTCAGAGCTCCGGCGTCGGCTTTCAGCAGAATCCCTACGCGGATTATCAGAGCTATCAGTCCATGCCATCGACCTCTAGGTCGCCCTTTCAGACACAATTCCAGAGCGTCGCGACGAGCTCCGGCTTCTCGCACTACTCGTACGGACAGGACTCGAGCTCAACTGCCGGAAGCGCTCATCAGAGTCACTCGCTcctccagcagcagcaaccgCAGCCCGGCAACACCATCTACGACGCGCCGTTCGCTCAGGACGAGGTGACCGGCACCCAGTACACGAATCTCAGTTCGATGCAGCCAATGGGCTCGGTCGTCCAGCAGATCGGCAAGCTCGAGTCCTTCTCCGAGCTGCTGTCCGCCAGGTACTCCTACTACGGCGACTGCCTCGATCCGCAACCCAGCCATcatcatcagcagcagcagcagcccaacgaacagcagcagcagcaacaccATCATCACGGTGCTTACGAGGCCACCGGGGCCAAGCTCGACATCGACAAGGGCAACGAGCTCGTCGGCAACCAGCAGACGAATCAGCTCGCCGAGGACGACTGCGACGAGAATTTCGGCGAGATTATCAAGAAATCGATGGTCGAGACAGTTTCTGCTTAA
- Protein Sequence
- IFLRPEVESASALQLAVPSAADSMESLHGEASGPEATGSKCYAFLDELDQLATTPAAPIEATAAPVLCEDGELLPDMGGYASKNPAEEDARLGPSTSVDLPKDPEESAPQQTSTPNPIRQRPSPTLPTPSLSQAGVGVSDFQPIGAEVSEEKARQLRNDVRRLSPVHVSLRERTLGEVSLTSEVPLGDLSAVLADGCLPDGLEPGRESECASADELDDDLPDAARAAGKKRQRELVIRLSRVDRNSPSPQQPEAAATPPPPPPFEPSELLKVPSPCPFGTNLVLQRCDGQSFVDGSNPGESPSRSLEPKTIIEKLHIGDEIEFSSPTATAASHCRSSSPPPPVFPEEASEDDSSEVLASMAAAAAGVEMPGEDGLTQAIMTRLEQDRPEPFTEDSAESLALAAGARDEVRSDGSDSGLGIEMPGDPGVPPPAPESDSETSFLDRIPDDILSDKDKLADHLDGFEPEVMRKLKLPNLHLLPGKSNLKRRLTDCLEEGEDQQPGAKRLNVDGVASTSSMTKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMGAIHSHAERFSLSEHAAEQRRLHRARLAQMRSERSNGTVSAASSEGASSSEDPSDDTDEEPSDAEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDSMEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKPPHHRSDEEASHHQESHQQQQHHSHHGAQQQQPNRLAVPMDPSPAGDCGGFTGLHYDSQDSGARGDSLDLYTIRDDCYPGDDCLGDGSQSQQQRKQMHAEFGQGFHYGAQSSGVGFQQNPYADYQSYQSMPSTSRSPFQTQFQSVATSSGFSHYSYGQDSSSTAGSAHQSHSLLQQQQPQPGNTIYDAPFAQDEVTGTQYTNLSSMQPMGSVVQQIGKLESFSELLSARYSYYGDCLDPQPSHHHQQQQQPNEQQQQQHHHHGAYEATGAKLDIDKGNELVGNQQTNQLAEDDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113418;
- 90% Identity
- iTF_01112588;
- 80% Identity
- -