Opom017077.1
Basic Information
- Insect
- Ormyrus pomaceus
- Gene Symbol
- TRERF1
- Assembly
- GCA_900474385.1
- Location
- UCOM01001086.1:1-7146[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-08 0.0001 22.6 0.1 2 46 808 852 807 852 0.96
Sequence Information
- Coding Sequence
- ACGGATCCCAATGCGgtgcagccgcagcagcagcaacagcagcagcggacGACCGTCACTACCTTCACGAGTCAGTCCACAACGACCACCTCCACTTCGACCGAcaatcagcagcagcagcaacagcagcagccgatCGTCGGGAAGCTGAACTTCGCCGtgcccgcgccgccgccgctcgccgccGGAGAGAAGGTCCGACGTATGTCAGACGGTGAACACTTCAGACAGCCCAATGTCACCATCGCCGGACACACCAACTCCGTGCAGAAGCAGCTGCAGGAGGCCCAGACGCAAGCTCAGGCTCAAGCCCTCGCTGACATGATCCTCAAGGGTACGACGAAGATGGCAGTGAAGAGGGCCACTTCAGACCCCGGCCAGCGGGTTCAATTGACCTATCAAACAACGGCAGTGCCAAACAATACACAGGTTTcacaacaacagcagcagcagcaaactGCTCAGCAGCAACAGGTTAATTcccagcagcaacagcaacaggCCGCAGTTACCGACAACTTTACTATGACCGGCTACCCAGAGGACGGTGGCTACTTCAGTCCCAGCTTGCAGGACGAGGTATTCCAACAAGTCACTTCGGTACCGGACAGCGTCTTACTTCATGCTACGCAACTTGATGCTATACAAtttcagGCATCAAGTCTAATGCAAGATCAAGCAGCTAACGATGCCCTGCAAGACATCAATCTCGAGGAACGTTTCTCCTCCCAGCACACAGTCAACCCGGATCTCCAGGCCCTAGTCAACTCGCCCTTACCGGACTCTCTTGCTGAGTTTAGCACCTACGGAGCCAACTACAACGACGGCTCCCACAATCTGCCAAGTCAATCACCCTTGCCGTCGCCTCTCACTCGACACGACAGCCCTAGTTTTACTTACCCAACGCCACCAGCCAGTCAGGAAGGCCTCCTCAGTGGCAGCCTACCGTTGCTAAGTCCTCAAGAGGACAGTGACGCGGTGCACTCGGTATCCTCGCCGCTGTCCGCCGCGTTTTACAGTACGAGCATGTCGTCGGCGGCAGCCATCGAGGAAGCTCTCAGCGAGGTCTTGCCCGACGAGACCGACACGGACGGAGCTGACCTCTACGGTCCCGGTTGCCCAAATCCTCACTCTCCGCTTCCGAGTCCACTGTCGGCAACTCCGGCACCCTCACCACTTTCGTCGCTGCCGCCCTCGTCGGTCTCATCACCCGGACCGGGCACCTTCACTACCACGAGCTTCCCGATGTCTCCACATCACACGCTCCAGAATCAGATGATGCCCAATTCCGAAGATCCTCTGCTGTCATCGAGTCCGAAAGATTTTGGTGCTGGAAGACGGAAATTTGAATTCCAgccttataaattaattacaaatcaGAATCTAGTAGACTTCGGCCTAGGTAACGGAGGCGTTGCAGGTCTCGTTGTTGATAACAATGGAGAGTTCAAACTTATACAGACAGCTGGACTGCAGAAGACAAACGTTTACGTACAAGCGGGTGCACTGAGTCCAGCTTTGGCTTTTAGAAAGGACATTTACCTGGGTTTACCAAAGATGGAACCGGGAAACGTTAATGTAAATGTTAACACTAATGTAGTTAACGGACAGATGATAAATAtgcaaaatcaaatatatcAACAAACTCCTGTTCATCAgcAAGCCATAAACCCAGCCAAATTTCTCATTCAGACTACGCAAACGTCAAAACCCAATTTGAAGCACAAGGCTCCTACAAATTGCCTACCAGTGCCAATTGACCaaattaaagaagaagaaatctTGGATGAGGATGTATTCCTCAGTCCGAGTAATGTGCCAATAACCACAGGAGGCAGTCCTGCGCGCCACCAGAAAAAGCGACCACGACTAGATTTTCCACAATTTGGAAGTTGCCCTGCAATGAACGGTTCGTATTCGTACCCATCGAGGCTTCGTCGTGCTTGTGATCGACATTGGGATAGCAGTtacacgccgccgccgattcTTGATCCTTCAAGACCTGGATCGGGTCTGTACGCTAGACTGCATCACAATGAGCGGGATTCCATAGAATTTTGCTCAGATGACTCACAAGGCAACGACGGACCGCCCCCGAGAATCAATATAGGAACCCGGTATCAGGCAGCAATACCGCAAGTGGTCCAAAGAGAACAAGATAGATTGGCTGTGGAACCCGAGATGGATCATCTCCTCTGGGATCCCGGCATTGATAGTGCCCTTACTGAGACTGAAATGGAAATGTATCTACAATTCGCTTGTTGTGCTGCTGTCCCAGGCGGTGgaagaaataaagaatatgCCCTTCATCTTTTACACATGTGTAGAGGCAATATTCGAgaAGCAATGCTCAATCTGATGCGACCAACTTCAGCGCTATCATTGGACCATCCGCTGCGAAACTACGAAGTCCAAGAGTCTGATCGTTGGACGTCCTATGAAATGGATCTGTTTTACCAGAGCTTGTTAAAGTACAACAAAGACTTCTTAGCGATATCGCGTGAGATTGGTAGTAAGAGCACGAGACAATGCGTGCAATTTTACTATCTATGGAAGCGACTCTGCCCTGAAGAGTACAAGCGGTTGCGGCTTCAATTTGGCAAACCCAAAATTAAGACCGAAAACTTTTTCGACTCCAAGGACACGAAAGAGCTACATGATGCAATTTCGGAACTTGATTTCAGCGACGGAAAGTCTATTCTCCATCGAACTTTGATGCAGACgacaaatgaaaaagaaacctCTGCCACTTTAACAACTAGCGAAGGAGAGTTACTACTTTTCGCCTACGATTGTCAAGATAGCTTTAGCGGGAGCGTAACAGTAACGAAGGCCGGAAGCGCCCGATTGGCCAGTGGCCCCGGCTGCACCGGCAAAGCTGCCGGTGGTGCCGCCGGCTACGTCGCCCCCGTCGAGCACACCAACTCACAAACTCACACTAGTACCGAGCAACAACTACCCGCGCCCACCCCACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCTCATATGAAATCTCATCGTCCAATTCCTTCACCCGATTCAACGGTGCAGGAGTCTAAGAAGCAGCTACAACTTCAActgcaacaacagcagcaacaaccGAAACCACTTCAAAGCAACATTCAATATGTTCAGACTCCTCAAAATCAACAACAAACTCCAACAAATAATGTGGATATTCAAAATCATCATCATCAACAAAACCATATGATGATGCACACGCAAAATTATCAACAGCAACAGCATCAGCATCAGCATCAACATCAGCAGCAAAACCAAATAATCCCAACAAATTGTGACGTTCCAACAAACCACGTGTGGCACAATCCACCGAGGATTCGACCGCCATAG
- Protein Sequence
- TDPNAVQPQQQQQQQRTTVTTFTSQSTTTTSTSTDNQQQQQQQQPIVGKLNFAVPAPPPLAAGEKVRRMSDGEHFRQPNVTIAGHTNSVQKQLQEAQTQAQAQALADMILKGTTKMAVKRATSDPGQRVQLTYQTTAVPNNTQVSQQQQQQQTAQQQQVNSQQQQQQAAVTDNFTMTGYPEDGGYFSPSLQDEVFQQVTSVPDSVLLHATQLDAIQFQASSLMQDQAANDALQDINLEERFSSQHTVNPDLQALVNSPLPDSLAEFSTYGANYNDGSHNLPSQSPLPSPLTRHDSPSFTYPTPPASQEGLLSGSLPLLSPQEDSDAVHSVSSPLSAAFYSTSMSSAAAIEEALSEVLPDETDTDGADLYGPGCPNPHSPLPSPLSATPAPSPLSSLPPSSVSSPGPGTFTTTSFPMSPHHTLQNQMMPNSEDPLLSSSPKDFGAGRRKFEFQPYKLITNQNLVDFGLGNGGVAGLVVDNNGEFKLIQTAGLQKTNVYVQAGALSPALAFRKDIYLGLPKMEPGNVNVNVNTNVVNGQMINMQNQIYQQTPVHQQAINPAKFLIQTTQTSKPNLKHKAPTNCLPVPIDQIKEEEILDEDVFLSPSNVPITTGGSPARHQKKRPRLDFPQFGSCPAMNGSYSYPSRLRRACDRHWDSSYTPPPILDPSRPGSGLYARLHHNERDSIEFCSDDSQGNDGPPPRINIGTRYQAAIPQVVQREQDRLAVEPEMDHLLWDPGIDSALTETEMEMYLQFACCAAVPGGGRNKEYALHLLHMCRGNIREAMLNLMRPTSALSLDHPLRNYEVQESDRWTSYEMDLFYQSLLKYNKDFLAISREIGSKSTRQCVQFYYLWKRLCPEEYKRLRLQFGKPKIKTENFFDSKDTKELHDAISELDFSDGKSILHRTLMQTTNEKETSATLTTSEGELLLFAYDCQDSFSGSVTVTKAGSARLASGPGCTGKAAGGAAGYVAPVEHTNSQTHTSTEQQLPAPTPLHYPCKICGKVFNKVKSRSAHMKSHRPIPSPDSTVQESKKQLQLQLQQQQQQPKPLQSNIQYVQTPQNQQQTPTNNVDIQNHHHQQNHMMMHTQNYQQQQHQHQHQHQQQNQIIPTNCDVPTNHVWHNPPRIRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01216720;
- 90% Identity
- iTF_01110897; iTF_01112533; iTF_01110054; iTF_01113363;
- 80% Identity
- -