Opom004429.1
Basic Information
- Insect
- Ormyrus pomaceus
- Gene Symbol
- ncor1
- Assembly
- GCA_900474385.1
- Location
- UCOM01000860.1:35789-45012[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3 5.2e+03 -2.0 0.1 31 39 437 446 434 447 0.80 2 2 2.1e-08 2.5e-05 24.6 0.0 3 43 608 648 607 651 0.96
Sequence Information
- Coding Sequence
- ATGAACAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTGCAACCACCGCCCCCCTCCGTCACCCAGGCCTCGCGCGATCAACATTCGTTTGCTTCGTATCCACAGCAGCCGGGAAGCGATCCGAACCTCAACATCACGATAATGAACATCACGGTGCCGCCGGTGGTGCCGGTGCCGGCGGGCCTTCGCTTCGTGCATCCGtacctgccgccgccgccacacCCACACCCGCCCCCGCAATCGGTGGCCCCAGTGGTACAGGTCGCCTCGTCGAATTCGGCCTCGCCCGTCTCGGCCTCCTCGGGCCCACCCTCCTCCGTcgtccagcagcagcagcaggtcAGCAGGCAGCAACCGTCCCCCGCCGTGGCAACGTCCAGCCCGGCCTATACCAGGGATGTCTACCGCAATGCCAGTCCCAACGTAAACGAGCGAGTGGCAATAAGCGTGAGCAGTAGCCCGGTATCCTCGCAGGTGGTCGGCGTCGGCAGCGACTACGTCATAAGCGGCCGGTGCGATCGGCCCCGGATATCCCTGCTGCCGGCACCGGCCTCGATAGCACCCGCGGCCTCGCCCACCGCGCCCACAGACTACCATTCGGCAGCGGCGCGCAACAACCGCAGCGCCGGCCCCGGGATCTTGGCGATGCAGCCACAGGAATACCGGCCCAGTCCCGTAGACATGGCACAGCTGCAGCAGGATTCACCTCCCTTCAAAAAGATCCGACTCGGACAGCCCGCCCAGCAACTGCCACCGActcagcagcaacagcagcaatcacagcagcagcagcagcagcaacagcagtcGATATCGCAGACGGACTGTCAGAGAATAACGAGCGGACAGGACACGCTGATCAAGCACAAGCAGCACGTGCAGCTGCAGCCACTCAGGATAGATACAAGGCCGACAGCTGGTGTCTACACACCTCAAACGGAAGCGATCTCACCGACACTCCCGGAGCCTAATACACAAGAGGATGTGGCATTTAGGACCACCAAAGATGATCTCCTGCAACAGATTGCCAAAGTCGATCGGGAAATCGCGAAAAGGGAATCTACGATTGGCAAGCTTcggaaaaaactaaaagaattaGAAGAAGTAGCTGGTCAGCCCTTTGATGCCGGTAAGCGGCCTGTCGAAGAAGCGTCTCAGCAGCCCAAACATCAATCCCttgcacaaaaaatttatgctgAAAATAGGaaaaaggcGGAGGAGGCGCACAGACTGCTAGAAAAATTAGGCCCAAAGGTAAAACTGCCACTGTATAATCAACCGTCAGACACAAGCGTATACCAAGAGAATCGCACGAGGCATCAGTGTATGAAGGCGCGTCTCGCAGCAAGACTTCGTAAGGAGCACGCAGAACGCGCTTCTCTGCATCGCCAGCAATCTCAGACGTATGCGATACTCGTGCAGGAATGGCACCGCAAGGTCGAGAAAATTGAGGCGACTCAAAAGCGTAAAACGAAAGAGGCCAAGAATCGCGAATTCTTCGAAAAGGTCTTCCCAGAGCTGCGCAAGCAACGTGAGGATAAAGAACGCTTCAACAGGGTTGGTGCACGTATCAAGAGCGAGGCTGATTTAGAGGAAATTATGGATGGTTTACAAGAGCAAGAGGAAGAGTTGTCAACCGACTTAAACGCGTTGAAAGCTCGCCAGATGGAGGACAAGAAGATGCGCTCGTATGCAGTGATCCCACCTCTGCTGTTGGACGCAAAGCAACGGAAACTCGCATTTCAGAATCGCAATGGTCTGCTGCAACCAGAGGAGCTCGAGGCGTTGCACAGCGAGAGGAAGTTGATCAACGTCTGGAGTACGACGGAGCACGACATGTTTAAGGAGAAGTATCTCCAGCATCCCAAGAACTTCGGAGCGATAGCACAGTCGTTCGAGCACAAGTCCGTAGCGGACTGCGTGCATCATTACTACCTCACTAAAAAAACGGAGAATTATAAGCAGCTACTGCGAAAGTCGAGGCGTACGCGTAGTTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTAACGACGGGAGTGACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAAGAAAACCCTCAGAATAGTGCGGTGGCGTcgagtagtagtagtagtagcaGCGTGACCACGACGACGTCGACTTCGTCGACTACCACTTCGTCTTCGACCACGTCAACAACAGTTACAAGCGTGAGTTCCGCCACGACGTCATCGTCCTCAGCGGGCGCTGCGACGAGTTCGTCTAGTAGCAATAGCGCTGCCGCGGCCTCGAGCTTAGCATCAGAGCCCTcagcgacgacggcgacgacgacgataaCGTCCtcggcgtcggcggcagcagcgtcAGCATCCGTCCCGAGTACAAGCGCGACGACGACTACGTCGAGTGTACTCACGACGACGTCTACGTCGTCGGCCAGCGTCAAGGACGCCCGCGAGGCCAATAAAGAGAACAAAGAGATTAAAACGGAGTCCAAGGACTCTATACTTATTAAAGACATAAAGGAGGAATCACATTCAAGTTCGGAAACTCTTTCTAGCAGGGAAAGCAaAATCGAGGGCAAGGGCGCTCTATCTTCGTCATCGAATTCAAGCGTAGTAAACGCCAACAATCCGAGCAATGTAGACCAGCAGCAAAAGGATAAGAAAAAGAATGCCGGAATCACGGGTGGCTCAGCCATTACCAGCAGGACGAAGGATAAGAAGAAAGAGAACCACGCGACGCCCATGGAGACCAGTGACGAAGAAGCTCAAGGTATGGACGCGATGGGTTCCCTCTTCCTGCCCTCCCTCTCCCGCAGCGATGCGCTCATGTCGGGCTGA
- Protein Sequence
- MNSGPAGGPGQPPAGLQPPPPSVTQASRDQHSFASYPQQPGSDPNLNITIMNITVPPVVPVPAGLRFVHPYLPPPPHPHPPPQSVAPVVQVASSNSASPVSASSGPPSSVVQQQQQVSRQQPSPAVATSSPAYTRDVYRNASPNVNERVAISVSSSPVSSQVVGVGSDYVISGRCDRPRISLLPAPASIAPAASPTAPTDYHSAAARNNRSAGPGILAMQPQEYRPSPVDMAQLQQDSPPFKKIRLGQPAQQLPPTQQQQQQSQQQQQQQQQSISQTDCQRITSGQDTLIKHKQHVQLQPLRIDTRPTAGVYTPQTEAISPTLPEPNTQEDVAFRTTKDDLLQQIAKVDREIAKRESTIGKLRKKLKELEEVAGQPFDAGKRPVEEASQQPKHQSLAQKIYAENRKKAEEAHRLLEKLGPKVKLPLYNQPSDTSVYQENRTRHQCMKARLAARLRKEHAERASLHRQQSQTYAILVQEWHRKVEKIEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTDLNALKARQMEDKKMRSYAVIPPLLLDAKQRKLAFQNRNGLLQPEELEALHSERKLINVWSTTEHDMFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKTENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQNSAVASSSSSSSSVTTTTSTSSTTTSSSTTSTTVTSVSSATTSSSSAGAATSSSSSNSAAAASSLASEPSATTATTTITSSASAAAASASVPSTSATTTTSSVLTTTSTSSASVKDAREANKENKEIKTESKDSILIKDIKEESHSSSETLSSRESKIEGKGALSSSSNSSVVNANNPSNVDQQQKDKKKNAGITGGSAITSRTKDKKKENHATPMETSDEEAQGMDAMGSLFLPSLSRSDALMSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969551;
- 90% Identity
- iTF_01110050;
- 80% Identity
- -