Opom021189.1
Basic Information
- Insect
- Ormyrus pomaceus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_900474385.1
- Location
- UCOM01003571.1:6902-15469[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 2.4e-14 53.1 0.0 1 45 45 90 45 90 0.95 2 2 1.6e-18 2.1e-15 56.5 0.0 1 43 498 541 498 543 0.95
Sequence Information
- Coding Sequence
- atgcCGAATTTATGCGTGTGGATCCCCAGcAGCACGTGCTACCGAGCGAAGCCCAGGGTAACGGGTCCAGTGTCGGGTACGGGCGTGCCGGTGGTCGGTaccggcggcggtggcggcggtcGTCGCACCTACACCGAGGACGAGCTCCAGGCGGCGCTGCGCGACATCCAGAGCGGCAAGCTCGGCACCAGGAGGGCGGCCGTACTCTACGGGATACCGCGCAGCACCCTACGCAACAAGGTCTACAAGCTCGCGttggagaaagagagggacgcGTCCCTCTCGTCCCAAGCCAATGCCGCCAATGCCCCCACCACCACTAACAGCGAGGTGCCGGGGGCGAACGCGGCGGCCAATAGCAATGCCCAGACCCCCACTACCGGGGCTGCCGGcattgccgccgccgctgcctccaTCATCGCCACCATCACCACGACCACAAcaaccaccaccaccaccatcaCCACACCAAATACCAACCGACAAAACGCCTCCGCGACCCCGCAGGCGGACGAGGTGGACGACAGGGAGCTCTCGGgcgcggaggaggagaaggaggtgGAGAAGGCGCTTCAAAAGCCGCTGCTCTCGATCGAGGACCTCGTCCGGTTCTCAAGCCTCGAGGGCGGAGGTGGCGACTCCCTCAGGGCGCTGCTGCAGCGCGGACAGGAGTCCGGGGCCGCCGACTGGTCCGTATTCGAGCACGCCAACATCGGACCTTACATACAGAAGATGCTGGCTGCCGCGGCACCCTTTAAAGGAATGGAGTCACAAGATTACAGAATCCCGGAGGTTATGCGTCGGCTGATGAGCGATGACAAAAAGCTCACCAAGGAGACCATAAACGGCGACCAAGTACAGCAGATTCACCATGCCTCGCTGCAACATCGTCTGCCTCAGtCGGGTCACCGAGCTCCAATGACGAACGACGACTTCAACCCGGCGATCGAGGAGGAGGCGAGCGACAGCGGCCAGGGCCGGCCGATACTCAAGATTCCGTCCTACAAGCCggcgagcagcggcggcgccaACAAGAACGGCGCCGAGCCGTCGGGCCCCGGCACCACCGCCACGGCCTTCGCCCAGAGCttcgcggcggccgcggccgccgccggtgGCAGTCCCGCCCTGCTCGAGCGCGCCTCGCCCGCCTTCTCCGGCACGAGCTCGCCCACCAACTCGCTCGTCGGCAAGGGTATGGCCGTCAACTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAGGATGGACAGCCGCCTACCGGCATGCCAGGTCAAGGAGCTCAATCAGGCCAGTCCATGATCTCCGAACCAAATCCATACAAGAGGGGTCGGTACACGCCGCCGCAGCAGCCTCAGCAGGGCGCGGGTGGCCAGGGTCAGCAGTCGAAACAGTCCCAGTCCGCGGCCCAGTCGCAAGACAAGAACAAACCCAGCACGGGCGGTAAGGGCACCCGGCCGAAGCGCGGCAAGTATCGCAACTACGACCGGGACAGCCTCGTCGAGGCCGTAAGAGCCGTTCAGCGAGGTGAGATGAGCGTCCACAGAGCTGGCAGCTACTACGGCGTTCCACATTCCACACTTGAGTACAAAGTCAAAGAGCGGCATCTCATGAGGCCACGAAAGAGGGATCAAAAGCAACCGGACGACAAAGCAAAGGACACAATGGCGGCAGGTTCAGCACTGCGCACGACCGCGGCGACGACGCCGGACAAGAAGCCCCTGCTGAAGCCCCAGAAGCCATTCACCCCGGCGGCCGGTAGCGGCGGTATGCCCGGGCCTAACGGGCTCAAGATGCCGCCCTTCATGGAAGGCATGCCCCCACTGCCGTTTGCTCATCCCTTCAACTTTTGGGGCCCGGCTCCGTTCATGACCGCGCCCTTCATGCCGACCGGCGGACCCAACGTCCCGACCATGCTACCGGAGCAGTACTTTGCCTCGCAGCGCATGCGCGGTCTACAGGAACAGCAGCGCAACGCCATCGCTCAGCAACAGAGAGACGGCGCCACTAACGAGCAGCCAGGTACGTCGAACTCGCGGAGCACACCGCTGATAAAATCGCCGCGCGAATTGGCCGAGAGCCTGTACGACGGCACAGCGGCGAACGGCAGCTTCCTGGACAGCCTGATAAGGTCGAGTCTGGAGTCCGGCATGCCGCGCGACCGGACGATGGGGGAGGCGCGGGCCAACGCCGGGCCGCCCCAGACGCAGCCTGAGAATCTGGGCAGCAGCAAGGTCCTGATCGACCAGCTCTGCAGGAACTCGCGGCGCACGCCGCTGCCCCGACCGATGCAGCAGGACAGCAGCGAGGACGAGGCGTCCGCGGGCAGCTACAGGCCGGGCTCGGCGCAGCCAAGGCAGGTGCCCGAGCGGCCCGAACGAGTGCCCACCGTCGACCTGAGCCCCTCGCCCTCGGAGCGGGCCCGGGCCCAGGACGAGGGCAGCGACCGCGGCCTCGCCTCGCCGCCCACgccgctctccctctcgaggCTCAGCGGCTCCGGCAGGGAGGACGACACCACCCGGGACTCGAGGAGCAGCCGAGAGCGCGAGGTACACAatggcggcggcagcgagaaGGCGGAGGACCGCCCGGAGTCCAACAACAAGAAGCTGAACCACTACCCGGACATACACAACCTTTACGCCGTGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAACCAGAAGACTCAGCAACACAAGGATTTCGCGGCCGGGGCCGGTGGCCTGGTGGTGCAGCTGCAGCGCAGCTACAACAGCAACTCAGCCGCGACGGCAgccggcgtcgtcgtcgtcaacAACGCCAACAGCAACTCTGCCGCCACCGGCAACGGCCGTCCGGCCACACCGAACAATCAGGAGGACGAGGACTTGGCAGCGACAACAGCGGCAACGGCGCCTTGCAGTCCTCcgcagacgacgacgacgacggcgacgacgacggcgacgacgacgtcgatgGAGGAGGAATCGGTAGAGCAGtag
- Protein Sequence
- MPNLCVWIPSSTCYRAKPRVTGPVSGTGVPVVGTGGGGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLALEKERDASLSSQANAANAPTTTNSEVPGANAAANSNAQTPTTGAAGIAAAAASIIATITTTTTTTTTTITTPNTNRQNASATPQADEVDDRELSGAEEEKEVEKALQKPLLSIEDLVRFSSLEGGGGDSLRALLQRGQESGAADWSVFEHANIGPYIQKMLAAAAPFKGMESQDYRIPEVMRRLMSDDKKLTKETINGDQVQQIHHASLQHRLPQSGHRAPMTNDDFNPAIEEEASDSGQGRPILKIPSYKPASSGGANKNGAEPSGPGTTATAFAQSFAAAAAAAGGSPALLERASPAFSGTSSPTNSLVGKGMAVNFRDVIAKSISVKFQDGQPPTGMPGQGAQSGQSMISEPNPYKRGRYTPPQQPQQGAGGQGQQSKQSQSAAQSQDKNKPSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKDTMAAGSALRTTAATTPDKKPLLKPQKPFTPAAGSGGMPGPNGLKMPPFMEGMPPLPFAHPFNFWGPAPFMTAPFMPTGGPNVPTMLPEQYFASQRMRGLQEQQRNAIAQQQRDGATNEQPGTSNSRSTPLIKSPRELAESLYDGTAANGSFLDSLIRSSLESGMPRDRTMGEARANAGPPQTQPENLGSSKVLIDQLCRNSRRTPLPRPMQQDSSEDEASAGSYRPGSAQPRQVPERPERVPTVDLSPSPSERARAQDEGSDRGLASPPTPLSLSRLSGSGREDDTTRDSRSSREREVHNGGGSEKAEDRPESNNKKLNHYPDIHNLYAVSTDKKSACDSKLIVDHSNQKTQQHKDFAAGAGGLVVQLQRSYNSNSAATAAGVVVVNNANSNSAATGNGRPATPNNQEDEDLAATTAATAPCSPPQTTTTTATTTATTTSMEEESVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01110852;
- 90% Identity
- iTF_01110852;
- 80% Identity
- -