Basic Information

Gene Symbol
ARID5B
Assembly
GCA_900474385.1
Location
UCOM01000949.1:25518-35329[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-25 8.3e-22 77.7 0.0 1 89 260 346 260 346 0.95

Sequence Information

Coding Sequence
ATGGAACCGAGACCGCGTGTTCTAGCATTCCTCGGGACAATCTGCATGCACTTAATTGGGTTGATTCTTAGCGATGAAGTGCTAACCATCTCGGAGAAGGTGGTGGTCCGCGTGCACGACCTGGTCACCTGGCTGTCCCCGTCGCTGGAGTGGTCGTGCGGCCGCGAGGTCTCCTACCCGTCGACGCCGTCCTCCTCGCCGGACAGCAGTCCGCAGCCGCAGACCCTCTCGGACCCGGGCCTCGACTTCTCGGACGTCGAGCGCCACCAGAAGGACATCGAGTCCTCGTTGGCGACGACGCGACGGGGCGAGCTGCCCGCCCAGTGCCAGACGAAGGTCGTCGTGCTCTCGTACGCGAGGTACTGCCGGTACAGGGCGCTGCTGCGGAGGCTCGAGGGCTCCGAGCCACGGTGGCTCTGCTCCTCGATCGCCGCCGCCCTCGGGGGATTCACCGCCGTACCGGGCACCAGGGTCCTCTTCTGCAGGGACACCTTCGATTATCCGGACCTGGAGACCCACGAGCTGCTCTGCAATCATTTAGCACCGAAACTAAAAGGTCGGCCTCGGAGGAAGCGCAAAAAGCGCAGCGTCTCGCCGGGCGAGTCCAGTAACGAGAGCGAGGCGTCAGTGGCATCCTCAGCGGCGGCATCGACTTCGAAGGGCTCGACCTCGAGCTCGGGCCAGTCGAGTTCGGCGATCTTGCCAACGGGCCCGGCTCCGGTGGGCAGACCGCCCGGAAGCGGCGCTGCCAGGCGCAGCGAACGCAAGATCAGTGCCGAGGAGAAGAAATTCGTCAGCGACGTGCAGAGCTTCATGACCTCGCGCAACACGCCGCTTGGAAAGATGCCGCTGCTTGGATACAGGCAGAttgaTCTATTCCTGTTTTACACAAAAGTTCAAGATTTGGGCGGATACGACAAAGTTAGTGCAAACCGTTTGTGGAAATCAATCTACGACGAAATGGGAGGCAATACAGGCTCAACAAGTGCCGCGACAATAACGAGAAGGCACTACGAAAGGCTACTCCTCCCCTACGAAAGATGCCAGAAAGGCGACGATTCTAAAGTAAACCTAAAACCAAATCAAGGTGCAGGTAGGCGCATCAAGACTCCGAGTATATCAGATGTATCAGAAGACTCAGTCGAAGTGAAACGAGAGACTGAAAGTCCTCCACCTACAACTGAAACACCCACCTCCACAACAAATACACCTCCCCCACTACAGTCAATACTTTCAACTTCGGCATTCCTGCCAGGGGAGAAGCCCCGTACGGAGAGCAGTAGCGGCAAGACTTCGTCACTGCGTAGCGTAAGAGTTAAACCCGAGCGCTTGAAGTCTCTGAACTCGATGATCGCGTCGCAACCTGCCAGCCAGCAACAACTGCCACCGAGCTCGCCGACCTCGCTGACGATGAGCAGCGGGTCGAGCGTCGTTACTCCCCTTTCGACCGCATCCTCGCCAAGCGGCTCGCCAACCGCGACCTCCACGCCGATCAACCCCGATCACAGTGTACTCGAGAGACAGCTCAATAGTCCGTTAATTACGCAACAGgTACCACCATCGTGTTCACCACCGGGACTGCCAGTGAGTACAGTAGCGACAAATGCAACAACAGTGGTGACATTGACTCCGCCACCGGAGAAGGACATGAAAGAGATCAAACTCGACCCGAAGCAGACAAGCTTGTTGGCTCAGGGCAAGGAAAACATACCTCTGTTCGAGGAGAAAGGTGCCATCTTCGGAGAGAAGACGATAGCACCTCACTCCCCTGAAGTCATCGACCTCGAGACGGAAAACGAATCCGGCACCAGGGATAAACTCATTATTCCGAGCTTCAAGAAACGGAAGTTGGAGATTTTACGCGAAGGAGGTTTGGAAGTTACACCTGTTGATTTAGAAACACGACCGAGCGTTATCCAGCCGACAACAACAACGACCACATCGACGACAGGGGCTTCACCTCAGGCAGCTCCAACGCCAGCATTAAACGAGTCGTTCAATTCAACTGCCTCTTCGATAGTCTCAGGCATGTTAAACACGACACCGGACCACGAAGAAGACTCTACGATGTCATCGACCTTCAACATAACTCCAACGACGGTGATTCCCAAGTTGATAAATGTAACCGTCACGCCAGATATCAGCCACATGCTGCCACACGAGGATGGTAGTCGACAGCAATATCCCACCACGCCGATTAAGCAGCCACAGAGCAGCCAGCACAGCAATGGACCGTCGACCTCGCCAGTTAATAGCCGTGTTATCAACTTAGGGAATAATTCGAATAATAGTGCGCTGCTGCAGCTGTACGCGAATGCGAATATTGCGGCGCCGCAGTCGTTGCTGCAGAACCAGCGTTTTGGACCTCCGCAGGTGTCCAACGGAAGGTTGTTTATACAGCCGGGAGTTACGCAGTCAAAGTCAATGTTTGACAGTAGTGAGAAAATGGTGTACGGGAACCCGAAGGATATTCTTGCGCAGCCTAAGTATGTGCCATCGATTGTTACGCAGCCTCACACACCTAGAACTCCGagtattcAAGCTCCAAGCATGCGATGCGGCAGTAGTAGCAGCAACGAGCCAACGCCGGGCGCGGCGGTGGTCGATCTCAGCCAAAAGGCCACCCCAGCCATCGAGCGTGCGAGTTACGGCAGGCCCAACCTGGAGATCGTCAAAGTCCCAGTGGTCCCTCGACCGACACCATTAAACCTCGAGACTCGAAACCACTCGGAAGCGCGGAACCTCGAGTCACCGTACCGCAGTGTCATAGGAATGACCGGGAACGTTAATAGTAGCAAACCATCACCGTCACCTCATcatcaacaacaacaacaacaacaacaacagccaATGTCTGAGGGAGCATCTACACCGAGAAAGAATCACTTTGTTACTGGCAGTATACAATCTAGCCCTGGAGCTGGATATGCTAATGTGCTGGACAGTCGCACGATGGCGACGAATAATTTGGAGATTACGCTTGTTAGTCCTAGGAAGACGTCGGGAGGAGGTGTTGGAGGACCGCAACTTAGTCCTACCCCTACTAATAGAAATAATCATACGatACCATCACCTCAACAAAGGAGACATCAACACTCTCCTCATCGGCAACATACCCCGCCGCATCAGCAACATCACTTGAACGGCAAATTCCCGACAAGGATGCCACCTGAGCCAGTGTCTCCTTACACTCCTAGAAAAGCACCGTCTTCGAGTAGCAATCACCATCATCCAGTGATACCGAATGTACCGAATCTGAGTCACCTAAACGCCAATGCAGTTTCTGGTTATGGCAAGTCTAgccaaattacaaattatcaaCAAATGGCGATAGAGAAGAGAAAAGCTGCGGCGGAAGCTGCTAGTAATGAGCAACGTAGAATAAGCGAAGGTGATAAAGTATCAttgcagcagcaacaacaacaaagaCTAGAATCGAAACAAGCGAGaGAATCTGAGACTTCATCGAGGCGGCATAGCATGCCAAATGTTCCAACTGGCTACATCCCAGCAATACCGCCAACGAGACCACCTCCGGGTTTCTACCCCCACCAGCTAGCCGGGAACAGTAACAACTCGCAGTTAGCtgccgcagcggcggcggcagcagccagCAGCAAGTACCTGCCGATCCTGGATCCGATGTATTACTCGGCCTTCTACAACGGCCTCTTCCCAGGACCAATTCCACCTCCTGTagctgcagcggcagcagccggccACCTCATGTCTCCCGAGCTGCAAGCCTACTACAAGGAGCTGCTTGCCTCGTCCTCGGcccaacagcagcagcagcaggccaTTCTCGCCATGGCTGCCAGCCAGCAGCATCAGCCTGCCGCTCCTACGTCTAAGTAG
Protein Sequence
MEPRPRVLAFLGTICMHLIGLILSDEVLTISEKVVVRVHDLVTWLSPSLEWSCGREVSYPSTPSSSPDSSPQPQTLSDPGLDFSDVERHQKDIESSLATTRRGELPAQCQTKVVVLSYARYCRYRALLRRLEGSEPRWLCSSIAAALGGFTAVPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASSAAASTSKGSTSSSGQSSSAILPTGPAPVGRPPGSGAARRSERKISAEEKKFVSDVQSFMTSRNTPLGKMPLLGYRQIDLFLFYTKVQDLGGYDKVSANRLWKSIYDEMGGNTGSTSAATITRRHYERLLLPYERCQKGDDSKVNLKPNQGAGRRIKTPSISDVSEDSVEVKRETESPPPTTETPTSTTNTPPPLQSILSTSAFLPGEKPRTESSSGKTSSLRSVRVKPERLKSLNSMIASQPASQQQLPPSSPTSLTMSSGSSVVTPLSTASSPSGSPTATSTPINPDHSVLERQLNSPLITQQVPPSCSPPGLPVSTVATNATTVVTLTPPPEKDMKEIKLDPKQTSLLAQGKENIPLFEEKGAIFGEKTIAPHSPEVIDLETENESGTRDKLIIPSFKKRKLEILREGGLEVTPVDLETRPSVIQPTTTTTTSTTGASPQAAPTPALNESFNSTASSIVSGMLNTTPDHEEDSTMSSTFNITPTTVIPKLINVTVTPDISHMLPHEDGSRQQYPTTPIKQPQSSQHSNGPSTSPVNSRVINLGNNSNNSALLQLYANANIAAPQSLLQNQRFGPPQVSNGRLFIQPGVTQSKSMFDSSEKMVYGNPKDILAQPKYVPSIVTQPHTPRTPSIQAPSMRCGSSSSNEPTPGAAVVDLSQKATPAIERASYGRPNLEIVKVPVVPRPTPLNLETRNHSEARNLESPYRSVIGMTGNVNSSKPSPSPHHQQQQQQQQQPMSEGASTPRKNHFVTGSIQSSPGAGYANVLDSRTMATNNLEITLVSPRKTSGGGVGGPQLSPTPTNRNNHTIPSPQQRRHQHSPHRQHTPPHQQHHLNGKFPTRMPPEPVSPYTPRKAPSSSSNHHHPVIPNVPNLSHLNANAVSGYGKSSQITNYQQMAIEKRKAAAEAASNEQRRISEGDKVSLQQQQQQRLESKQARESETSSRRHSMPNVPTGYIPAIPPTRPPPGFYPHQLAGNSNNSQLAAAAAAAAASSKYLPILDPMYYSAFYNGLFPGPIPPPVAAAAAAGHLMSPELQAYYKELLASSSAQQQQQQAILAMAASQQHQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01109891;
90% Identity
iTF_01110708;
80% Identity
-