Onit010819.1
Basic Information
- Insect
- Ormyrus nitidulus
- Gene Symbol
- GZF3
- Assembly
- GCA_900474335.1
- Location
- UCOL01014382.1:775-1269[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-20 4.7e-17 62.0 3.4 1 35 8 41 8 42 0.97 2 2 5.9 1.8e+04 -3.8 0.3 3 5 130 132 129 133 0.53
Sequence Information
- Coding Sequence
- ATGTACACAAAGCAAGGTGTGTGTAGCAACTGTAATACTACTGTTACTCCCCTTTGGAGAAGAGGGGCAGATGGAAGTTACCTCTGCAATGCATGTGGtctatactttaaaattcacaaaaagcATCGACCAACAGAACTTAAAACGGATACTTTTAGGCAGAGAAACCGATTCCGAAAAGAATACTCTTCCGAAAACCAAATCTTCAAACAATATTATGATGACCAGGTTCTTTATGATCGTAGAGTAGCAAGCATTGATTTCTACAATGCAAACCACGAcacaaaaatggaaaataagaGGCAATTAGGTCATAAAAGGCCTTATGCACTTTATTTCCCCCAAATACCTCCTAATGGTGTCATCTTAAACAGATCAGTTGAATCAAATTGTAACGCAAGGCCCGTAAACAATTCCTCTCAAGAAGACGAAGAAAACAATGAATCTATCGCTATCAAAGTGTTGTTGAGCTTGTCTAAGATTCAGCCATACTGA
- Protein Sequence
- MYTKQGVCSNCNTTVTPLWRRGADGSYLCNACGLYFKIHKKHRPTELKTDTFRQRNRFRKEYSSENQIFKQYYDDQVLYDRRVASIDFYNANHDTKMENKRQLGHKRPYALYFPQIPPNGVILNRSVESNCNARPVNNSSQEDEENNESIAIKVLLSLSKIQPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -