Onit007429.1
Basic Information
- Insect
- Ormyrus nitidulus
- Gene Symbol
- -
- Assembly
- GCA_900474335.1
- Location
- UCOL01001007.1:6189-14623[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 7.2e-06 0.00095 20.2 1.0 1 23 189 211 189 211 0.98 2 30 0.0031 0.41 11.9 1.9 1 23 235 258 235 258 0.96 3 30 0.0014 0.18 13.0 0.5 2 23 265 287 264 287 0.96 4 30 0.00099 0.13 13.5 0.8 1 21 307 327 307 328 0.94 5 30 0.019 2.5 9.5 0.4 3 23 436 456 434 456 0.95 6 30 0.0012 0.16 13.3 0.5 1 23 462 485 462 485 0.96 7 30 0.00014 0.018 16.2 0.1 1 23 553 576 553 576 0.96 8 30 0.0047 0.62 11.4 1.0 1 23 582 605 582 605 0.94 9 30 0.14 18 6.8 1.5 1 23 618 640 618 640 0.97 10 30 8.1e-06 0.0011 20.1 1.0 3 23 684 705 683 705 0.96 11 30 0.053 6.9 8.1 0.9 2 23 771 794 770 794 0.92 12 30 3.6 4.7e+02 2.3 0.0 2 23 803 825 803 825 0.84 13 30 0.18 24 6.4 0.1 2 23 832 854 831 854 0.93 14 30 1.5e-05 0.002 19.2 1.2 1 23 862 884 862 884 0.98 15 30 0.00059 0.078 14.2 1.5 1 23 961 984 961 984 0.97 16 30 0.0066 0.86 10.9 0.4 2 23 991 1013 990 1013 0.95 17 30 0.00082 0.11 13.8 4.8 1 21 1057 1077 1057 1078 0.94 18 30 0.0031 0.41 12.0 1.8 2 23 1092 1113 1091 1114 0.93 19 30 0.54 71 4.9 2.8 1 23 1117 1139 1117 1140 0.95 20 30 0.0091 1.2 10.5 0.9 2 23 1147 1170 1146 1170 0.93 21 30 1.1 1.5e+02 3.9 0.2 2 23 1178 1200 1178 1200 0.95 22 30 4.2 5.5e+02 2.1 0.0 2 23 1207 1229 1206 1229 0.87 23 30 0.26 34 5.9 2.7 2 23 1238 1260 1238 1260 0.96 24 30 0.27 36 5.8 1.4 2 23 1266 1288 1266 1288 0.93 25 30 0.072 9.4 7.7 0.2 1 23 1352 1375 1352 1375 0.96 26 30 0.035 4.6 8.6 2.0 1 20 1407 1426 1407 1428 0.91 27 30 0.57 75 4.8 1.3 2 23 1520 1542 1519 1542 0.93 28 30 0.82 1.1e+02 4.3 0.4 2 23 1549 1571 1548 1571 0.95 29 30 0.2 26 6.3 1.8 1 23 1582 1604 1582 1604 0.97 30 30 0.11 14 7.1 0.4 2 20 1612 1630 1611 1632 0.91
Sequence Information
- Coding Sequence
- ATGCTCGACGCCTCGAGCGTTACTCGCCCAGCTTTCTTACCCCTGGCACGCCGCGAGAGTATTACGGAGGATGACAGGCTGCCGAAATGCCTGTGCTACAGGTGCATGTATAACTTGGAGAATTTCTACGATTTTAGAACGGCCTGCGTCAACGCGGTCAGTTTGCTGGAGAGATGTTTGCCACCGAAAGAGTCAAAGACGGAGATAAAGGTGGAGATACAAGAAGAGGAGCCATACTCGGAGCTGCGCATGGAATTGCTGAAGGAGAAGGAGAACATGCCGATGCTGATACCGGAGGCACCGGTCGTCAATCCCAACGCGGCCCTCGGCACTCCGCCCAGGCTCAGGTCTGACGGGGAGCCTGACAGCGAGGAGCTCAAGCAAGATGAAACCATGGAAGACCCCGACAAGTCGGACGAATACGAGATGGACATGGAAACGAATCCCAGCGATTTTCTGGAGATGAGTGCGATGGTAGCGGAGGAGGACAGCGGTCTGCCGCAGCCCCCGCCGGGTCTGCATCAGGAGGCAGTTTTCCAGCACCGCAATGAACAGCACGAAGTCTACGTCTGCTCGCTCTGCAACAAGGCTTTCAGCTCTAAGGGTCACCTCTCGCTTCACGCTCGTATCCACAATGGCGCCGGCGGCGACGTCATCGGCGAGAAGGTACTCACCGACGATCATACCAGCTACAAGAGGCCCTACCAGTGCGATTTGTGCAACAAGTCCTACTCTACGGCTAAACATCGGTGGGGACACGTTTCGACCACGCATAGAGGTCACCCAGCAGTGACATGTAGTTTTTGCGCACGAATTTATTCAACGCGCTCGAATCTCGAGGAACATGTAAAATCACGACACTCGAGCATGCCAGCCATGGCTGAGCAACAAATGCCGTACATACAGCCCGATACGCGGCATCAGTGCAAAACCTGCCCTAAGATGTATACCAACGTCACTGATCTCAACAAACATAGCAGAGCCTGTCTTATTGAACAACAGCGCAAAGGACATCAGTCTGGCAATTTGCAAAATTCTGgcaagaaaaatatgaattCTAAACTTAAAAACGCATTGGATCATTCATCAGACATATCCAGTTTGGATTCAGATAACGAGCAAAAAGACTACAAGAGCGCTGAGGCGAAGCTTGCCAAAAACCCGCAGTTAACCATTCTCAAGCAAGCCCTTATTAAAGGGGATTGCGTTAAGAAAGAATACGAGGAGAGACAAAAAATGTTGAGCAAACAGAAGAAGCAAGCCAGCATGATTAAGGGTATGGATGCGGACGGAAGAAAATGGTTCTGTGACGCATGTCCCCAGGGTTTCTCGAGCTGTGAAGAGCTCAAGGAACACGTAAAGTTACACGTTGCCGAAAAGCCTTACATTTGCATGCTATGCGAGAAGGACTTTGAGAGTAAGAACTCTCTAAGCAAGCATATTGTGACTTCACATGGCGTTGATCCTACGCCGCTGATTGAAAGTGATAAGTGTTTGAAGAAGAATGTGCAGCCTGGAAACTCGCAAATGCCTATGATTAAGCAGGAGAATCTTACCAAAGAAAATTCCGGGTCGCCATCCTCAAATTCACACTTGGAAAATGACGATGACATGCATGAAAACGGTAACGATAACGCGCTCGAGATAGAGACTGTTTTCGTATGTGAAATCTGTACGCGAGATTTCAACGACCGAGCATCATTATGGCTGCACATCAGAGCCACTCACAAGGAATATGCTGCGTTCGCTTGCGGTATTTGCCTCAAAATCTGCTCTGATAATAAGCAATTACAAAATCATGTCAATTTATATCACGGTGGatcaaaactattaatttcGGAGCAGAGGAGGTATAGTTGCACGATATGCGGACGACAACACGATTCCAGAAAGAAACTCATCACTCACGTATCAATTCACAACGTGGATCCCGTCTTCGATCCTGCGAATTTTGTACAGTTAAATGCCAGTTACTGCAACGACAATGTTAATAGTAACGAAGGAAATGAGCTTCTCATGGAGGCCGACGACGACAGCGAAAGGGTGGATTGCTACATTTGCAATAAATCGTTCCCTAACGAAGATCATTTGATTAGACACCAGAGAAACGCCCACAGAAATGAACCCATGGGACAAATGGTGCAGATGGGCGAGTTCAGTGGGAATGGTGGTCCTGCAGGGCAAAATGGTACCGGCAATCGCGCCCAGTACCATCTTTTTTTCGTCTGCGAACTCTGCGGCAGTTCACATCCTAGCAAGTGGGAACGTTGGTTGCACGTCAGCAGCGAACATGCTAATGAGTCTTTAATTAGGTGTGAACGTGATGATTGCGGCAAGATCTTTGCGACAAAAACTCTGAAAAATGAGCATGCACAACATCACCAGCTGCAAGGCATCTCGCCCAACACCTGCGAAATCTGCGGCAAGCTGTGGGGTAGCCGCGTCGACTACTGGAAGCATGTTATGGGTGTGCACTCGGATACGGTGCCACTGATTTGCGGTGTCTGTCTCAAGGTCTTCCCCAATGTACTGCAACTTAGTCAGCACGTCAAACTGAAGCATTGGCCTCTAACGAACGGTGACTTTAGCTGTGACATATGTGGCCGACCCTATTCCAACAAAAGCAAGATGTCAAGACACAGAAAAATTCACGGTTTGGACGGTGAGCCCTACAATCCGGCCACTACTAACAGTAGCCTCGTCATCAGCGATGCTTCTACGAATGAAATGCCATGTCTTCCAATGCCTGTCCATTTAGATAACGGCTTACCGCAACCAATAGAAACAGGTAGCCTCGATCTGAGCTGCGAGATGTGTGGTGATATCAAATTTGGATGTCTCGAAGACCTTTCCAACCATCGCCGCGTGCACCACGGCCTCTTCCCTTGCGATTTATGCAACAAGTATTACGGACGCACTTCGCACCTTTGGAAGCATGTGAATCGTGTACACAAAGGTCACGAGGATGTCACCTGCCGCTATTGTCTTAAAACCAGCGCTTCGAGAGACCATTTGGCTGCACATATTGCAAAGATTCATAGATACGAGCCAGACGTGAAAAACGATATGAGGGATGTAATAAGTTACAAAACAAGCTACAACCAGGCCGCcgctgcggctgcggctgctgctgcggccgCTGCGGCCGCCGAAGAGGATGACGGCCTGCACTTCTGCGAAAAGTGCAACAAGTCATTCCACAAGAGGTACCTTCTTAGACGCCATATGAAAGGTTGTCAGAACTATCGCAAAGATCCAAGTGCATTATTAACTCGCTGCAGAGCATGTGAGCGCATCTTCAAGGACCGCGCAAGTTTACAAAAGCATATAGAGAATCATCACAGCTCATACACGTGCCATTTGTGCAATGAGACAATCACCTCAAAACTAGGCATCATGACGCACAACCGCGTGCACCACATGCAGCACCCAGACCTAACTTGCGAGCTTGAAAACTGTCGCAAACTGTTCAGGACAAAGGAGGACCTCGAGTCTCACCGCAAGGACCACAAACACCACGGCAGCCCGAACGTCTGCGATTTCTGTGGTGACACCGTTGAGAATAAGCTGAAGTTGAAGATGCACATTTTGAGTTTGCACAGAAATGAGATCGGAGTCTCCTGTGGTGTGTGTTTAATCCCGATGAAGGATCCCAAGGACCTTAAGAAGCACGTTGAAGATGTGCATGCGGGTATTCTATCAAAACCAAATACTTGTCAGGTCTGCGGTAAACAATACGCTTCGAAGTGGAAGGCGTTCGATCACACGAAAAAGTGCCACGGCAAAGTGTTCCGCACGTGCAAGCAGTGTCTTGCAGTTTTCACTTCGGACGAGCTCCTGCGCAATCATTACGAGCACACTCACAACATTCCTAAAGACCAGCTTGACGCTTATCAGTACCGACTTGAGGTCGCGGGCAGCAAGATAGATGACTACGACCTGGGCCCTCTCGAGGTTGTAGTAAAAGAGGAGCCGGAGGAGCTCGATTTCGATATGGAGCCGTTTGACGACAACTCAAGCGACTCGAAGAGGAAACGTGGCAGCAACGATACTTATGACTGCCAAATCTGCCCTGAAATCTTCCTCAATTACGAACTACTTTCGTCACATTATAGGAATGTGCATAATACTGATCCGGAGAGGATGCTTAAGAGGATTAAGCTAGAGGTAACGACTAGCGGTAGCAAAcccaaaaagaaaatgaggGATAGAGAGAATTACGAGTGCAAAAACTGCCAGAAACAGTTTTGCACGAAGACACTGTACTTGGGCCACGTGAGCGTATGCACGAGAAAATCCACTCCCGTCATGCCGCCAACGTCAATTTTGGAAgcgcatttgaaaaataataatcagatTAAGGAGGAACCCGAAGCAATCGTTTGCGAGACGAACCTTAACATTCCAGACTTCAATCTCTTCGAGGACATAAATATGCAACTTTCGGGCCAGAAACCAGTGCCGAGTCTAATGCCTCTTGGACACACGTCCAAATCTTCCAAATACTCGAGGAAAGACTCTAGAAAGGTATACGATGAGTCAACGAACACAGAATGCGCCTGCGAGGTCTGCGGTAAGCAGTGGCCTGCCAAAAAGCACTTATGGCAGCATCTGATTCGTTTCCATCGTGCAGAAGCTGCTGTTACTTGTGGAGTATGCTTGAAACTCTGTGTTACTTACGAAGACCTGTCTGAGCATTTAAAGAATGTGCATCCTGCTATTCTTTCTACAGCGGGAAACAATTTCACTTGTAAAATCTGCGGCAGGTACCATAATGCTAGAAGTAAGCTTTTGCTGCATATGAGCATTCATATTAATTGTAAGGGCAACCAAGTATGTCAGCGTTGCAATAGGACTTTTGAGAATGACGAAAAACTCAAGGAGCACTTTGCTACTTGCATGGTCACTAGAGGAGAACCTCAGGATGGTACAATTATTAAGGAGGAGGGAATGGACGAAACTGTGGAGAAGGGGAGCCTAATTGGCGACGATGAAGAGGATCCGGAGAACGAGTACGAGTCTGAAGAGAACTCTGAAAATGTTGGCAGCAGCTCGAAGTCGAATGATTCGGATAGCAGTAGTAGTGGTTCCAGCAACAGTTCGAGCGACGACGATGATAGCGACGATGATGAGGATGATGCAGCGTCGAGGAATATCGAAGAAGATAGTAGTAAAGACTCGGATAATGTTGAACAGATTACGCAAAGTCAAATAGAAGTTCCGAAACAAGAAATGATCGAGGAGAATGAAACGATGAGCCTTGGTGAGGAGGAAgacgaggaggaagaagagatGTCAGAGTCTGAAGAAGATCAGTACCTTCAGCAAAAGCAAGCGCAACATCAGCAAGCGCAGCACGAGCTCGAGGATCATTACGCAATGCcccaaaaagaagaaatgcTTGTCAATTACTCGGACGATGAGGAAAATCCAGCCCTCAGCCCGATGCTCCCCGTTGCCATTAAAGAGTCCGAACAAAATGATCACAGTCAAGAAGAATTGGCCAGGCAACAAGCGATGAGTGAGAACAATATGGGCAAAACCACTGACAGCGATGACGACAGCAGTGATGAGGTTGAAGAGGTCGATGACTCCGACGATGATGATGAGGTCCAGCAGGCTGAAGTTGTCGATCCAAACAGCGCCTTCCATGctgataataattcaaatagcAGCAATGAAGgtGAAGAAGTTGAAGAAGAGCAAGAAGATCAAGAAGATCAAGAAGATCAAGAAGATcaagaagaacaagaagaacaagaagaacaagaagaacaagaagaacaagaagaacaagaagaacaagaagaacaagaagaaCACGAAGAACACGAAGAACACGAAGAAcaagaagaacaagaagaaCAAGTCGAATGCGAAGAACAAGAAATagaagaagaacaagaagaGGAAGAACAAGAACAGGAGGAAGAAGGTGAAGCTGAAGTAGAAGGAGAGGAACATGAGGAACATGAAATTCAGGAAGAACAAGAGTACGAAGAGCAAGAGGAACAGGAAGAAAACGAGGAACAGGAAGAACAAGAGGTTGAGGAAGCAGAAGTCCTTGAAGTAGACGAGAACGAAATGCACAATCTGAACGGCACCGTCTTGATGATTGCGAATGACGCGGACGGCAATCAAATTCTCATCGAGCGCAATATGGCTGATCTCGAGAACGACGATTCTGTCCATGACATGGCGCAGTATGTGTTTCAAGATGGCACAGGCTTCGCCCTCGAGGACTATGAAGCTATCGTCGAAAGTCAGGGcgatgaagaagaagagcaTCAAGGATTCGAAATGGAAATTGGCTCCTCCCAAGAGGAACAAATCGAAGAgcaagaggaggaggaagaatcCGAGCTCAGGGAAGAATTGGAAGAAGTTGAGGAACAAGAAGTTATGCATGAAGAAGAGGATGACGAGGAACAAGAACTCAGTTGCAGTGCCAAAAGCTAA
- Protein Sequence
- MLDASSVTRPAFLPLARRESITEDDRLPKCLCYRCMYNLENFYDFRTACVNAVSLLERCLPPKESKTEIKVEIQEEEPYSELRMELLKEKENMPMLIPEAPVVNPNAALGTPPRLRSDGEPDSEELKQDETMEDPDKSDEYEMDMETNPSDFLEMSAMVAEEDSGLPQPPPGLHQEAVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHNGAGGDVIGEKVLTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCSFCARIYSTRSNLEEHVKSRHSSMPAMAEQQMPYIQPDTRHQCKTCPKMYTNVTDLNKHSRACLIEQQRKGHQSGNLQNSGKKNMNSKLKNALDHSSDISSLDSDNEQKDYKSAEAKLAKNPQLTILKQALIKGDCVKKEYEERQKMLSKQKKQASMIKGMDADGRKWFCDACPQGFSSCEELKEHVKLHVAEKPYICMLCEKDFESKNSLSKHIVTSHGVDPTPLIESDKCLKKNVQPGNSQMPMIKQENLTKENSGSPSSNSHLENDDDMHENGNDNALEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGICLKICSDNKQLQNHVNLYHGGSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPVFDPANFVQLNASYCNDNVNSNEGNELLMEADDDSERVDCYICNKSFPNEDHLIRHQRNAHRNEPMGQMVQMGEFSGNGGPAGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSEHANESLIRCERDDCGKIFATKTLKNEHAQHHQLQGISPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEPYNPATTNSSLVISDASTNEMPCLPMPVHLDNGLPQPIETGSLDLSCEMCGDIKFGCLEDLSNHRRVHHGLFPCDLCNKYYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASRDHLAAHIAKIHRYEPDVKNDMRDVISYKTSYNQAAAAAAAAAAAAAAAEEDDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPSALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVHHMQHPDLTCELENCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHAGILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDELLRNHYEHTHNIPKDQLDAYQYRLEVAGSKIDDYDLGPLEVVVKEEPEELDFDMEPFDDNSSDSKRKRGSNDTYDCQICPEIFLNYELLSSHYRNVHNTDPERMLKRIKLEVTTSGSKPKKKMRDRENYECKNCQKQFCTKTLYLGHVSVCTRKSTPVMPPTSILEAHLKNNNQIKEEPEAIVCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHTSKSSKYSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCVTYEDLSEHLKNVHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCKGNQVCQRCNRTFENDEKLKEHFATCMVTRGEPQDGTIIKEEGMDETVEKGSLIGDDEEDPENEYESEENSENVGSSSKSNDSDSSSSGSSNSSSDDDDSDDDEDDAASRNIEEDSSKDSDNVEQITQSQIEVPKQEMIEENETMSLGEEEDEEEEEMSESEEDQYLQQKQAQHQQAQHELEDHYAMPQKEEMLVNYSDDEENPALSPMLPVAIKESEQNDHSQEELARQQAMSENNMGKTTDSDDDSSDEVEEVDDSDDDDEVQQAEVVDPNSAFHADNNSNSSNEGEEVEEEQEDQEDQEDQEDQEEQEEQEEQEEQEEQEEQEEQEEQEEHEEHEEHEEQEEQEEQVECEEQEIEEEQEEEEQEQEEEGEAEVEGEEHEEHEIQEEQEYEEQEEQEENEEQEEQEVEEAEVLEVDENEMHNLNGTVLMIANDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVESQGDEEEEHQGFEMEIGSSQEEQIEEQEEEEESELREELEEVEEQEVMHEEEDDEEQELSCSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113641;
- 90% Identity
- iTF_01113641;
- 80% Identity
- -